rna9613, rna9613 (mRNA) Nannochloropsis gaditana

Overview
Namerna9613
Unique Namerna9613
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1296
Alignment locationKK037254.1:284325..285781 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101039g3.7427.mrna
Orig protein idgnl|cribi|Naga_101039g3.7427
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:284325..285781 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101039g3gene9331Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9613rna9613-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21090.1cds9582Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9613 ID=rna9613|Name=rna9613|organism=Nannochloropsis gaditana|type=mRNA|length=1296bp
ATGGCAGCTATTACCCTTACTGTTGCCGATGAGGAGGGAAATGCAGCCTC
TCTGCAGGTGAGCACTCAGGATACTGTGGAGGCATTGAAGGCTCTTGTAG
AGATCGAGATGTGTGTGCCCTCTGCGCAACAAGTCTTGCTGAAGGACGGG
GCCCCCCTAGCTCCTGGTGCACGCCTCGGGGCGCTTGGCGTGGCCGACAA
CGACTTTCTCTTCCTGGTCCGCGACAATAGCAACGCGAATATTAGCGGCA
TGAGTGGTCGTGACACATCCACAAGCAGTGCCACCACAGCGACAGCGACG
GCCTCGGCCGACGCGGGCACTGGCAGGGCCAACCCTGCCAGTGCGGTCCA
CTCCTTGAAGGACCTTCCCGCGGGGTTGGGGCCCGAGCAGCTCATGACCA
CCATCAAGGCCAACGGGCGCCTTCTGGCCGAGCTCCAGCACCACAACGCT
CCGTTGGCCGCGGCCATCGCGACGGGCGACGTGGTCAAGGTCCGGTCAGT
GCAAATGAAGCAGAAGCTGGAGGCAGTCTCGCGGCGGGTGGAGGAGCAGG
AGGCCATCCGGGCTTTGGAAGCGAACCCGATGGACCCCGAGGCCCAGCGG
AAGATCGAGAGCATGATCCAGAGGGAAAATGTGCACCGGAACATGGAGCT
GGCCATGGAGGAGATGCCGGAGGCCTTCGGGTCGGTGGTGATGCTGTACG
TGGATGTGCATGTGAACGGGCACCCGATCAAGGCCTTCGTGGACTCCGGG
GCACAGAGCACCATCATGTCCGCCGCCTGCGCGCTCCGATGTGGCTTGAG
CCGTCTCATCGACACTCGCTTCGCGGGCATCGCCAAGGGCGTTGGCACGT
CCAAGATCCTGGGTCGTATCCACATGCACACACTTAAGGTCGGGGAGGCC
CACCTCCCCTGCACCTTCACGGTGCTCGAAAACGACGACGTGGACTTTCT
CTTCGGGCTGGACATGCTCAAGCGCCACCAGTGTTGCATCGACCTCCGCC
GCAACCTCTTGGTCTTGGGGAGCGCGGGGAAAGAGGTGCCGTTCCTCGCC
GAGAAGGATCTCCCGGCCCGCGCCCGTGGCCACCAGGAGGAAGGCGCCGA
GAAAGGGGGGGAGGGAGGGAGGGAGGGCGAAGGGTCGGTCGGGGAAGGAA
GAGAGGCAGGCCTGGAGGGCCAGCTGATAGGTCTGGGCTTCTCGCGGGAG
CAGGCGCGAAGCGGACTGCGGCGGACGGAGGGAAACGTGGAGGAGGCAGC
TGCCTTGCTCTTGGCTGAGTTCGGGGAGCGGGAGGGGGGAAGCTAG
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protein sequence of rna9613

>rna9613-protein ID=rna9613-protein|Name=rna9613|organism=Nannochloropsis gaditana|type=polypeptide|length=329bp
MAPLVLIDSSDPPWRNAPTRTIVVLMDVLALGGLICARFWAKRAHSPVFS
CLGHPGKLHLLSVSLFSFAALQCISHVSLLSYQNGQDFKLGAYAVAGIAA
VLAYTSFSTLLLYLSLISRPSPIGVVSLVASPAFFLLAILSVLDPALAHK
DRASFFLAWFPWWGNLVLHLIVSSYPLPPSLPPVTWGGAIPLLGRGEALK
RPGVMRMEEDVRACFKLPLLIYSSLSSLCLLAGVAVREEEGGARKALALG
MAVWVRSLWPLHAGTIGLQMAARWAGEREAGGEEGKRGARGGDGGGGGGG
GGGGGGGGGGRGGGGGKTTGSRDFGEAAE
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mRNA from alignment at KK037254.1:284325..285781-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9613 ID=rna9613|Name=rna9613|organism=Nannochloropsis gaditana|type=mRNA|length=1457bp|location=Sequence derived from alignment at KK037254.1:284325..285781- (Nannochloropsis gaditana)
ACGTAAAACCTGCACCACATTGTTACCTGATTCCGAGAGACGTCTCACTT
TACAAATCCGCATAACAAACACCTAGGATGACACACATACAATCAGCTTG
GTAAGGCGAGGCCTAAGACCCGTGCTTAAGCTGCGGGAGCCTAGAAGATA
CTTTTCGAGCCGGTAAAAAGCGACTCCTGCGTTGAAGAAGACATGGCCCC
CCTGGTCCTCATCGACTCGTCCGATCCACCATGGCGTAACGCGCCTACGC
GTACGATCGTAGTGCTCATGGATGTGTTGGCTCTCGGAGGGTTGATCTGT
GCACGTTTTTGGGCCAAGAGGGCTCATTCTCCTGTCTTCTCGTGCCTCGG
ACATCCTGGCAAGGTAAGGAGACGGATCAAATTATTGGGATCGGGGCTTC
GTCCGGCTGGCACAAACTCTGCGAGCAGGCACTCATTGTCTTCTCTACCG
TTCACTTACTTCTGTCCTTCGCCTCCTTCCAGCTCCACCTTCTTTCCGTC
TCCCTCTTCTCCTTCGCGGCCCTCCAATGCATCTCGCACGTGTCGCTCCT
TTCCTACCAGAACGGCCAAGATTTCAAACTTGGCGCCTACGCAGTCGCAG
GCATCGCTGCCGTGCTCGCCTACACCAGCTTCAGCACTCTCCTCCTGTAC
TTGAGCCTCATTTCCCGCCCGTCTCCCATAGGGGTCGTCAGCCTGGTGGC
CAGCCCCGCCTTCTTCCTCCTCGCCATTCTCTCCGTCCTTGACCCAGCCT
TAGCACACAAGGACCGCGCCTCTTTCTTCCTGGCCTGGTTCCCCTGGTGG
GGAAACCTGGTGCTGCACTTGATTGTGTCCTCGTACCCTCTCCCTCCCTC
CCTCCCGCCCGTCACCTGGGGGGGGGCAATCCCCCTCCTAGGACGCGGGG
AGGCACTGAAGAGGCCAGGGGTGATGAGGATGGAGGAAGACGTGAGGGCG
TGCTTCAAGCTACCCTTGCTTATTTACTCCTCTCTGAGCTCTCTCTGCCT
GCTGGCGGGCGTGGCGGTGAGGGAGGAGGAGGGCGGGGCGAGGAAGGCCC
TGGCCCTGGGGATGGCCGTGTGGGTGCGATCCCTGTGGCCCCTGCACGCG
GGGACGATAGGCCTGCAGATGGCGGCACGATGGGCGGGCGAGAGGGAGGC
AGGGGGGGAAGAGGGGAAGAGGGGCGCTCGTGGAGGTGATGGAGGGGGAG
GGGGAGGAGGGGGAGGAGGAGGAGGAGGGGGAGGAGGAGGGAGAGGAGGA
GGAGGAGGGAAGACGACGGGCAGCAGAGACTTTGGCGAGGCTGCTGAATG
AGGAGTCAGTGCGGGGCTTATTGGTTGACTTTAGGGAGGTGCGGCTGGGC
AGACTTATCGCGAAGGGTGGGGGCGGGGTGGTGCGAGAGGGGCGACTGGG
GGGGGTACCGGTGGCCGCCAAGAGTCTGTACTCGCAGTTCTTGATGGGCG
AGGTGGA
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Coding sequence (CDS) from alignment at KK037254.1:284325..285781-

>rna9613 ID=rna9613|Name=rna9613|organism=Nannochloropsis gaditana|type=CDS|length=1980bp|location=Sequence derived from alignment at KK037254.1:284325..285781- (Nannochloropsis gaditana)
CTCCACCTTCTTTCCGTCTCCCTCTTCTCCTTCGCGGCCCTCCAATGCAT
CTCGCACGTGTCGCTCCTTTCCTACCAGAACGGCCAAGATTTCAAACTTG
GCGCCTACGCAGTCGCAGGCATCGCTGCCGTGCTCGCCTACACCAGCTTC
AGCACTCTCCTCCTGTACTTGAGCCTCATTTCCCGCCCGTCTCCCATAGG
GGTCGTCAGCCTGGTGGCCAGCCCCGCCTTCTTCCTCCTCGCCATTCTCT
CCGTCCTTGACCCAGCCTTAGCACACAAGGACCGCGCCTCTTTCTTCCTG
GCCTGGTTCCCCTGGTGGGGAAACCTGGTGCTGCACTTGATTGTGTCCTC
GTACCCTCTCCCTCCCTCCCTCCCGCCCGTCACCTGGGGGGGGGCAATCC
CCCTCCTAGGACGCGGGGAGGCACTGAAGAGGCCAGGGGTGATGAGGATG
GAGGAAGACGTGAGGGCGTGCTTCAAGCTACCCTTGCTTATTTACTCCTC
TCTGAGCTCTCTCTGCCTGCTGGCGGGCGTGGCGGTGAGGGAGGAGGAGG
GCGGGGCGAGGAAGGCCCTGGCCCTGGGGATGGCCGTGTGGGTGCGATCC
CTGTGGCCCCTGCACGCGGGGACGATAGGCCTGCAGATGGCGGCACGATG
GGCGGGCGAGAGGGAGGCAGGGGGGGAAGAGGGGAAGAGGGGCGCTCGTG
GAGGTGATGGAGGGGGAGGGGGAGGAGGGGGAGGAGGAGGAGGAGGGGGA
GGAGGAGGGAGAGGAGGAGGAGGAGGGAAGACGACGGGCAGCAGAGACTT
TGGCGAGGCTGCTGAATGAATGGCCCCCCTGGTCCTCATCGACTCGTCCG
ATCCACCATGGCGTAACGCGCCTACGCGTACGATCGTAGTGCTCATGGAT
GTGTTGGCTCTCGGAGGGTTGATCTGTGCACGTTTTTGGGCCAAGAGGGC
TCATTCTCCTGTCTTCTCGTGCCTCGGACATCCTGGCAAGCTCCACCTTC
TTTCCGTCTCCCTCTTCTCCTTCGCGGCCCTCCAATGCATCTCGCACGTG
TCGCTCCTTTCCTACCAGAACGGCCAAGATTTCAAACTTGGCGCCTACGC
AGTCGCAGGCATCGCTGCCGTGCTCGCCTACACCAGCTTCAGCACTCTCC
TCCTGTACTTGAGCCTCATTTCCCGCCCGTCTCCCATAGGGGTCGTCAGC
CTGGTGGCCAGCCCCGCCTTCTTCCTCCTCGCCATTCTCTCCGTCCTTGA
CCCAGCCTTAGCACACAAGGACCGCGCCTCTTTCTTCCTGGCCTGGTTCC
CCTGGTGGGGAAACCTGGTGCTGCACTTGATTGTGTCCTCGTACCCTCTC
CCTCCCTCCCTCCCGCCCGTCACCTGGGGGGGGGCAATCCCCCTCCTAGG
ACGCGGGGAGGCACTGAAGAGGCCAGGGGTGATGAGGATGGAGGAAGACG
TGAGGGCGTGCTTCAAGCTACCCTTGCTTATTTACTCCTCTCTGAGCTCT
CTCTGCCTGCTGGCGGGCGTGGCGGTGAGGGAGGAGGAGGGCGGGGCGAG
GAAGGCCCTGGCCCTGGGGATGGCCGTGTGGGTGCGATCCCTGTGGCCCC
TGCACGCGGGGACGATAGGCCTGCAGATGGCGGCACGATGGGCGGGCGAG
AGGGAGGCAGGGGGGGAAGAGGGGAAGAGGGGCGCTCGTGGAGGTGATGG
AGGGGGAGGGGGAGGAGGGGGAGGAGGAGGAGGAGGGGGAGGAGGAGGGA
GAGGAGGAGGAGGAGGGAAGACGACGGGCAGCAGAGACTTTGGCGAGGCT
GCTGAATGAATGGCCCCCCTGGTCCTCATCGACTCGTCCGATCCACCATG
GCGTAACGCGCCTACGCGTACGATCGTAGTGCTCATGGATGTGTTGGCTC
TCGGAGGGTTGATCTGTGCACGTTTTTGGGCCAAGAGGGCTCATTCTCCT
GTCTTCTCGTGCCTCGGACATCCTGGCAAG
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Synonyms
Publications