EWM21090.1, cds9582 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21090.1 vs. NCBI_GenBank
Match: gi|585101151|gb|EWM21090.1| (hypothetical protein Naga_101039g3 [Nannochloropsis gaditana]) HSP 1 Score: 642.114 bits (1655), Expect = 0.000e+0 Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0
Query: 1 MAPLVLIDSSDPPWRNAPTRTIVVLMDVLALGGLICARFWAKRAHSPVFSCLGHPGKLHLLSVSLFSFAALQCISHVSLLSYQNGQDFKLGAYAVAGIAAVLAYTSFSTLLLYLSLISRPSPIGVVSLVASPAFFLLAILSVLDPALAHKDRASFFLAWFPWWGNLVLHLIVSSYPLPPSLPPVTWGGAIPLLGRGEALKRPGVMRMEEDVRACFKLPLLIYSSLSSLCLLAGVAVREEEGGARKALALGMAVWVRSLWPLHAGTIGLQMAARWAGEREAGGEEGKRGARGGDGGGGGGGGGGGGGGGGGRGGGGGKTTGSRDFGEAAE 329
MAPLVLIDSSDPPWRNAPTRTIVVLMDVLALGGLICARFWAKRAHSPVFSCLGHPGKLHLLSVSLFSFAALQCISHVSLLSYQNGQDFKLGAYAVAGIAAVLAYTSFSTLLLYLSLISRPSPIGVVSLVASPAFFLLAILSVLDPALAHKDRASFFLAWFPWWGNLVLHLIVSSYPLPPSLPPVTWGGAIPLLGRGEALKRPGVMRMEEDVRACFKLPLLIYSSLSSLCLLAGVAVREEEGGARKALALGMAVWVRSLWPLHAGTIGLQMAARWAGEREAGGEEGKRGARGGDGGGGGGGGGGGGGGGGGRGGGGGKTTGSRDFGEAAE
Sbjct: 1 MAPLVLIDSSDPPWRNAPTRTIVVLMDVLALGGLICARFWAKRAHSPVFSCLGHPGKLHLLSVSLFSFAALQCISHVSLLSYQNGQDFKLGAYAVAGIAAVLAYTSFSTLLLYLSLISRPSPIGVVSLVASPAFFLLAILSVLDPALAHKDRASFFLAWFPWWGNLVLHLIVSSYPLPPSLPPVTWGGAIPLLGRGEALKRPGVMRMEEDVRACFKLPLLIYSSLSSLCLLAGVAVREEEGGARKALALGMAVWVRSLWPLHAGTIGLQMAARWAGEREAGGEEGKRGARGGDGGGGGGGGGGGGGGGGGRGGGGGKTTGSRDFGEAAE 329
BLAST of EWM21090.1 vs. NCBI_GenBank
Match: gi|553191808|ref|XP_005855460.1| (hypothetical protein NGA_0155500, partial [Nannochloropsis gaditana CCMP526] >gi|422293602|gb|EKU20902.1| hypothetical protein NGA_0155500, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 554.288 bits (1427), Expect = 0.000e+0 Identity = 280/286 (97.90%), Postives = 282/286 (98.60%), Query Frame = 0
Query: 1 MAPLVLIDSSDPPWRNAPTRTIVVLMDVLALGGLICARFWAKRAHSPVFSCLGHPGKLHLLSVSLFSFAALQCISHVSLLSYQNGQDFKLGAYAVAGIAAVLAYTSFSTLLLYLSLISRPSPIGVVSLVASPAFFLLAILSVLDPALAHKDRASFFLAWFPWWGNLVLHLIVSSYPLPPSLPPVTWGGAIPLLGRGEALKRPGVMRMEEDVRACFKLPLLIYSSLSSLCLLAGVAVREEEGGARKALALGMAVWVRSLWPLHAGTIGLQMAARWAGEREAGGEEGK 286
MAPLVLIDSSDPPWRNAPTRTIVVLMDVLALGGLICARFWAKRAHSPVFSCLGHPGKLHLLSVSLFSFAALQCISHVSLLSYQNGQDFKLGAYAVAGIAAVLAYTSFSTLLLYLSLISRPSPIGVVSLVASPAFFLLAILSVLDPALAHKDRASFFLAWFPWWGNLVLHLIVSSYPLPPSLPPVTWGGAIPLLGRGEALKRPGVMRMEEDVRACFKLPLLIYSSLSSLCLLAGVAVREEEGGARKALALGMAVWVRSLWPLHAGTIGLQMAARWA REA G+ G+
Sbjct: 1 MAPLVLIDSSDPPWRNAPTRTIVVLMDVLALGGLICARFWAKRAHSPVFSCLGHPGKLHLLSVSLFSFAALQCISHVSLLSYQNGQDFKLGAYAVAGIAAVLAYTSFSTLLLYLSLISRPSPIGVVSLVASPAFFLLAILSVLDPALAHKDRASFFLAWFPWWGNLVLHLIVSSYPLPPSLPPVTWGGAIPLLGRGEALKRPGVMRMEEDVRACFKLPLLIYSSLSSLCLLAGVAVREEEGGARKALALGMAVWVRSLWPLHAGTIGLQMAARWADGREARGKRGR 286 The following BLAST results are available for this feature:
BLAST of EWM21090.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|