rna9609, rna9609 (mRNA) Nannochloropsis gaditana

Overview
Namerna9609
Unique Namerna9609
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length609
Alignment locationKK037254.1:278441..279864 -

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Properties
Property NameValue
Productubiquitin-conjugating enzyme e2 27
Orig transcript idgnl|cribi|Naga_100776g4.10774.mrna
Orig protein idgnl|cribi|Naga_100776g4.10774
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:278441..279864 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100776g4gene9327Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9609rna9609-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21093.1cds9578Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9609 ID=rna9609|Name=rna9609|organism=Nannochloropsis gaditana|type=mRNA|length=609bp
ATGGCCGCCAGAGCACCGCGTCCTCTGCGCGACCGAGATTTAAGACCCGT
CCTTTCCCCTCCAAGACATGCCTCGCTGGACGAGCCTGTGAGGCTTCCTG
TGCTTCTTTACGTCCCAAATCTGCTCTGTTATGCCCGCCTCCTCCTCAGC
ATCTACGGCCTCTCCATGGTAATCCAGACAGTCTTGCGTCAACAGGAAGC
TTCTCGCCGCGCTCTCTTGGCCGGAGAAGCAGCAAATTGCTCAGTGCAGG
CTGTCGTGCAGATGGCGACACATTACGCTGCCCATGCCGGCTATACTACG
GGCTTGCTCGCCCCCATCGCCACCACGCTCCTGGGGAAGGCCTTGGCGCA
GGCGTCCTCCGCCCTCCTGCGTGACATGGAGCGGCGCGCAGGCGGCGCGG
GCGAGACAGAGGCTCTCTCCACCGTGGAGCCCGACCTCCTGGCCGCCCTG
GTGGTTTTTCTGGCGGCTGGGGCCTTGGACCTGTTGGACGGGGTGGCGGC
CCGCCGGATGAAGCAATGCTCGCGCCTGGGGGCCCTCCTGGACGTGGTCG
CCGACAACGTTCTCCGCGGATGCATCACCGGGAGCAGGGGCGTCACTGGA
AGAAAGTGA
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protein sequence of rna9609

>rna9609-protein ID=rna9609-protein|Name=rna9609|organism=Nannochloropsis gaditana|type=polypeptide|length=149bp
MGDFSRIQKELRECAKDQKSGVTASPVGSSLNHLSGTITGPDGTPYEKGV
FKIDIQIPTSYPFEPPKMKFVTKIWHPNISSQSGAICLDILKDQWSPALT
IKTALISLQALLCTPQPVRGGREGGRERGREAGRKGRVTCMGRAGGPWP
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mRNA from alignment at KK037254.1:278441..279864-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9609 ID=rna9609|Name=rna9609|organism=Nannochloropsis gaditana|type=mRNA|length=1424bp|location=Sequence derived from alignment at KK037254.1:278441..279864- (Nannochloropsis gaditana)
CCGAACGAGCTCATGGAGTGTGCGCGCCTCAAGCCTGGCAGCGGGGCGGG
ATCGATTGCTTTTATCTGGGTCGATTGCCTCTACTTTGACCCCTCGCTCT
CTGTCTCTCGCTCCCAGCCCCGTCACTCCTGCCTCGTAGGGGTCAATTCC
ACCGCATTTCTGTCAACTCAGGAGGGACGGACATCTGTACAGCGCTGTCT
TTGTTGGATTCTCACATTTTAATCAGTTGTCCAGGTGCCAGCTTTTACTT
TGTCTCTGCTACACCCTTCATTTTGTCCTTTGTTCCATTTCAGCTCCATC
CTGAAACAACTTTCACATCTTGCTCGGCCCCCCGCGTCCTCACAGGCAAG
AAGCGCCTCCCAAAATAGTGGCAGGCCACTGTAGCCACTCGCTACTGCTG
TATTAGCATCATCATTTGGAGCTGTGGACACTATTACCCAGCGCGGATAT
TGCAACGATAGCAGGGGGCCACAGCCGTTCCTCTCTTCCTCCCTCGCCTT
CCTGTACGGTCGTGACTCTAGGAGTTTCTGGAGGCCCTTGAGTTTGAAAG
GGTCACCGATAGCATCATTTCAATCCAATCTTGACGCAGAGGCCCGAGCA
GCAAGCATGGGAGACTTCTCGCGCATCCAGAAGGAGCTCAGGGAGTGCGC
CAAAGATCAGAAGTCCGGGGTCACAGCAAGGTGAGTCCATCTAGGGTGCC
TGAGGCATACATGGCAACGGTCAAAACGAATGTGTACGTGCTGGCGGGTA
GAGCTTTGTCGTCTGGCGCTTGTTTGCGGGCGTCAGTCAGGGCGCTATTG
CCGACACGGACCCTCCTCTCGTGCTCCGGACTCCCCCCCTCTCACACGTA
GGCTCTAGCCTCAACCACCTCTCAGAGTCTCTCCCTTACAGCCCCGGAAG
CTCGAACGTCAATCATCTCTCAAACTTCCTCCCTCTGACAGCCCAGTAGG
CTCTAGCCTCAACCACCTCTCTGGCACCATCACGGGTCCCGACGGGACCC
CCTACGAGAAAGGCGTCTTCAAGATCGACATCCAGATCCCAACCTCCTAC
CCCTTCGAGCCCCCCAAAATGAAGTTCGTCACCAAGATTTGGTGCGTGCG
CGACGGCTGAGATGGCCCATCCGTGTTCCATGTTCATGATAAAAAGACGA
TAAAGCGACTGAGTGTCTGCCCCTGCCCCTCCTCCCAGGCACCCGAACAT
CTCCTCCCAGTCGGGAGCGATATGCCTGGACATCCTCAAGGACCAATGGT
CGCCCGCCCTCACCATCAAGACCGCGCTCATCTCCTTGCAAGCCCTGCTC
TGTACACCCCAGCCCGTGAGAGGAGGGAGGGAGGGAGGGAGGGAAAGAGG
GAGGGAGGCAGGGAGGAAGGGTCGCGTGACGTGTATGGGCCGGGCGGGAG
GGCCATGGCCATGATATTTTTCGA
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Coding sequence (CDS) from alignment at KK037254.1:278441..279864-

>rna9609 ID=rna9609|Name=rna9609|organism=Nannochloropsis gaditana|type=CDS|length=1350bp|location=Sequence derived from alignment at KK037254.1:278441..279864- (Nannochloropsis gaditana)
GCACCCGAACATCTCCTCCCAGTCGGGAGCGATATGCCTGGACATCCTCA
AGGACCAATGGTCGCCCGCCCTCACCATCAAGACCGCGCTCATCTCCTTG
CAAGCCCTGCTCTGTACACCCCAGCCCGTGAGAGGAGGGAGGGAGGGAGG
GAGGGAAAGAGGGAGGGAGGCAGGGAGGAAGGGTCGCGTGACGTGTATGG
GCCGGGCGGGAGGGCCATGGCCATGACCCAGTAGGCTCTAGCCTCAACCA
CCTCTCTGGCACCATCACGGGTCCCGACGGGACCCCCTACGAGAAAGGCG
TCTTCAAGATCGACATCCAGATCCCAACCTCCTACCCCTTCGAGCCCCCC
AAAATGAAGTTCGTCACCAAGATTTGATGGGAGACTTCTCGCGCATCCAG
AAGGAGCTCAGGGAGTGCGCCAAAGATCAGAAGTCCGGGGTCACAGCAAG
GCACCCGAACATCTCCTCCCAGTCGGGAGCGATATGCCTGGACATCCTCA
AGGACCAATGGTCGCCCGCCCTCACCATCAAGACCGCGCTCATCTCCTTG
CAAGCCCTGCTCTGTACACCCCAGCCCGTGAGAGGAGGGAGGGAGGGAGG
GAGGGAAAGAGGGAGGGAGGCAGGGAGGAAGGGTCGCGTGACGTGTATGG
GCCGGGCGGGAGGGCCATGGCCATGACCCAGTAGGCTCTAGCCTCAACCA
CCTCTCTGGCACCATCACGGGTCCCGACGGGACCCCCTACGAGAAAGGCG
TCTTCAAGATCGACATCCAGATCCCAACCTCCTACCCCTTCGAGCCCCCC
AAAATGAAGTTCGTCACCAAGATTTGATGGGAGACTTCTCGCGCATCCAG
AAGGAGCTCAGGGAGTGCGCCAAAGATCAGAAGTCCGGGGTCACAGCAAG
GCACCCGAACATCTCCTCCCAGTCGGGAGCGATATGCCTGGACATCCTCA
AGGACCAATGGTCGCCCGCCCTCACCATCAAGACCGCGCTCATCTCCTTG
CAAGCCCTGCTCTGTACACCCCAGCCCGTGAGAGGAGGGAGGGAGGGAGG
GAGGGAAAGAGGGAGGGAGGCAGGGAGGAAGGGTCGCGTGACGTGTATGG
GCCGGGCGGGAGGGCCATGGCCATGACCCAGTAGGCTCTAGCCTCAACCA
CCTCTCTGGCACCATCACGGGTCCCGACGGGACCCCCTACGAGAAAGGCG
TCTTCAAGATCGACATCCAGATCCCAACCTCCTACCCCTTCGAGCCCCCC
AAAATGAAGTTCGTCACCAAGATTTGATGGGAGACTTCTCGCGCATCCAG
AAGGAGCTCAGGGAGTGCGCCAAAGATCAGAAGTCCGGGGTCACAGCAAG
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Synonyms
Publications