EWM21093.1, cds9578 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21093.1 vs. NCBI_GenBank
Match: gi|585101155|gb|EWM21093.1| (ubiquitin-conjugating enzyme e2 27 [Nannochloropsis gaditana]) HSP 1 Score: 306.22 bits (783), Expect = 2.119e-105 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0 Query: 1 MGDFSRIQKELRECAKDQKSGVTASPVGSSLNHLSGTITGPDGTPYEKGVFKIDIQIPTSYPFEPPKMKFVTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQPVRGGREGGRERGREAGRKGRVTCMGRAGGPWP 149 MGDFSRIQKELRECAKDQKSGVTASPVGSSLNHLSGTITGPDGTPYEKGVFKIDIQIPTSYPFEPPKMKFVTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQPVRGGREGGRERGREAGRKGRVTCMGRAGGPWP Sbjct: 1 MGDFSRIQKELRECAKDQKSGVTASPVGSSLNHLSGTITGPDGTPYEKGVFKIDIQIPTSYPFEPPKMKFVTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQPVRGGREGGRERGREAGRKGRVTCMGRAGGPWP 149
BLAST of EWM21093.1 vs. NCBI_GenBank
Match: gi|1109229468|ref|XP_019189451.1| (PREDICTED: ubiquitin-conjugating enzyme E2 27 [Ipomoea nil]) HSP 1 Score: 182.956 bits (463), Expect = 4.038e-56 Identity = 87/118 (73.73%), Postives = 97/118 (82.20%), Query Frame = 0 Query: 1 MGDFSRIQKELRECAKD-QKSGVTASPVGSSLNHLSGTITGPDGTPYEKGVFKIDIQIPTSYPFEPPKMKFVTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQP 117 M D R+QKEL+EC +D Q SG+ SP G SL HLSGTI GP GTPYE G FKIDI +P YPFEPPKMKF TK+WHPNISSQSGAICLDILKDQWSPALT+KTAL+S+QALL P+P Sbjct: 1 MVDLGRVQKELQECNRDVQVSGIKVSPRGDSLTHLSGTIPGPIGTPYEGGTFKIDITLPDGYPFEPPKMKFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSIQALLSAPEP 118
BLAST of EWM21093.1 vs. NCBI_GenBank
Match: gi|298708013|emb|CBJ30375.1| (ubiquitin-conjugating enzyme 1 [Ectocarpus siliculosus]) HSP 1 Score: 186.037 bits (471), Expect = 3.199e-55 Identity = 87/116 (75.00%), Postives = 97/116 (83.62%), Query Frame = 0 Query: 2 GDFSRIQKELRECAKDQKSGVTASPVGSSLNHLSGTITGPDGTPYEKGVFKIDIQIPTSYPFEPPKMKFVTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQP 117 GD RI+KEL ECA+D SGVTA P G SL L GTI GP GTP+E G F I+I IP+ YPFEPPKMKF TKIWHPNISSQ+GAICLDILKDQWSPALTIKTAL+SLQAL+C+P+P Sbjct: 164 GDAGRIRKELAECARDTDSGVTAVPKGDSLARLEGTILGPVGTPFEGGTFLINIDIPSGYPFEPPKMKFATKIWHPNISSQTGAICLDILKDQWSPALTIKTALLSLQALMCSPEP 279
BLAST of EWM21093.1 vs. NCBI_GenBank
Match: gi|567888786|ref|XP_006436915.1| (hypothetical protein CICLE_v10032815mg [Citrus clementina] >gi|568863381|ref|XP_006485127.1| PREDICTED: ubiquitin-conjugating enzyme E2 27 [Citrus sinensis] >gi|557539111|gb|ESR50155.1| hypothetical protein CICLE_v10032815mg [Citrus clementina] >gi|641825234|gb|KDO44511.1| hypothetical protein CISIN_1g029412mg [Citrus sinensis]) HSP 1 Score: 180.644 bits (457), Expect = 3.709e-55 Identity = 83/118 (70.34%), Postives = 98/118 (83.05%), Query Frame = 0 Query: 1 MGDFSRIQKELRECAKD-QKSGVTASPVGSSLNHLSGTITGPDGTPYEKGVFKIDIQIPTSYPFEPPKMKFVTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQP 117 M DFSR+QKEL+EC+KD + SG+ +PV +L HL+G I GP GTPYE G F++DI +P YPFEPPKM FVTK+WHPNISSQSGAICLDILKDQWSPALT+KTAL+S+QALL P P Sbjct: 1 MIDFSRVQKELQECSKDIEASGIKVTPVSDNLVHLTGIIPGPVGTPYEGGTFRLDITLPDGYPFEPPKMHFVTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPAP 118
BLAST of EWM21093.1 vs. NCBI_GenBank
Match: gi|1035901038|gb|OAY30638.1| (hypothetical protein MANES_14G047100 [Manihot esculenta]) HSP 1 Score: 179.874 bits (455), Expect = 7.381e-55 Identity = 82/118 (69.49%), Postives = 100/118 (84.75%), Query Frame = 0 Query: 1 MGDFSRIQKELRECAKD-QKSGVTASPVGSSLNHLSGTITGPDGTPYEKGVFKIDIQIPTSYPFEPPKMKFVTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQP 117 M DF+R+QKEL+EC++D + SG+T +P +L L+GTI GP GTPYE G+F+IDI +P YPFEPPKM+F TK+WHPNISSQSGAICLDILKDQWSPALT+KTAL+S+QALL PQP Sbjct: 1 MIDFARVQKELQECSRDIEASGITVTPKSENLARLTGTIPGPIGTPYEGGIFQIDISLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQP 118
BLAST of EWM21093.1 vs. NCBI_GenBank
Match: gi|449440514|ref|XP_004138029.1| (PREDICTED: ubiquitin-conjugating enzyme E2 27 [Cucumis sativus] >gi|700208355|gb|KGN63451.1| hypothetical protein Csa_1G000740 [Cucumis sativus]) HSP 1 Score: 179.489 bits (454), Expect = 1.070e-54 Identity = 83/118 (70.34%), Postives = 98/118 (83.05%), Query Frame = 0 Query: 1 MGDFSRIQKELRECAKD-QKSGVTASPVGSSLNHLSGTITGPDGTPYEKGVFKIDIQIPTSYPFEPPKMKFVTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQP 117 M DF+R+QKEL+EC KD + SG+ +P SL+HL GTI GP TPYE G+F+IDI +P YPFEPPKM+F TK+WHPNISSQSGAICLDILKDQWSPALT+KTAL+S+QALL PQP Sbjct: 1 MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQP 118
BLAST of EWM21093.1 vs. NCBI_GenBank
Match: gi|1035918421|gb|OAY48012.1| (hypothetical protein MANES_06G124300 [Manihot esculenta]) HSP 1 Score: 179.104 bits (453), Expect = 1.469e-54 Identity = 82/118 (69.49%), Postives = 99/118 (83.90%), Query Frame = 0 Query: 1 MGDFSRIQKELRECAKD-QKSGVTASPVGSSLNHLSGTITGPDGTPYEKGVFKIDIQIPTSYPFEPPKMKFVTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQP 117 M DFSR+QKEL+EC++D + SG+ +P +L+ L+GTI GP GTPYE G F+IDI +P YPFEPPKM+F TK+WHPNISSQSGAICLDILKDQWSPALT+KTAL+S+QALL PQP Sbjct: 1 MIDFSRVQKELQECSRDIESSGIRVTPKSENLSRLTGTIPGPMGTPYEGGTFQIDISLPDGYPFEPPKMQFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSIQALLSAPQP 118
BLAST of EWM21093.1 vs. NCBI_GenBank
Match: gi|567181034|ref|XP_006402053.1| (hypothetical protein EUTSA_v10014747mg [Eutrema salsugineum] >gi|557103143|gb|ESQ43506.1| hypothetical protein EUTSA_v10014747mg [Eutrema salsugineum]) HSP 1 Score: 178.718 bits (452), Expect = 2.232e-54 Identity = 83/118 (70.34%), Postives = 98/118 (83.05%), Query Frame = 0 Query: 1 MGDFSRIQKELRECAKDQK-SGVTASPVGSSLNHLSGTITGPDGTPYEKGVFKIDIQIPTSYPFEPPKMKFVTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQP 117 M DFSR+QKEL++C KD+ SG+ SP +L L+GTI GP GTPYE G F+IDI IP YPFEPPKM+F TK+WHPNISSQSGAICLD+LKDQWSPALT+KTAL+S+QALL TP+P Sbjct: 1 MIDFSRVQKELQDCEKDKDASGIRVSPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITIPEGYPFEPPKMQFSTKVWHPNISSQSGAICLDVLKDQWSPALTLKTALVSIQALLSTPEP 118
BLAST of EWM21093.1 vs. NCBI_GenBank
Match: gi|645268452|ref|XP_008239533.1| (PREDICTED: ubiquitin-conjugating enzyme E2 27 [Prunus mume] >gi|1162559124|ref|XP_020420027.1| ubiquitin-conjugating enzyme E2 27 [Prunus persica] >gi|1139773416|gb|ONI07888.1| hypothetical protein PRUPE_5G145200 [Prunus persica]) HSP 1 Score: 178.718 bits (452), Expect = 2.450e-54 Identity = 85/119 (71.43%), Postives = 100/119 (84.03%), Query Frame = 0 Query: 1 MGDFSRIQKELRECAKD-QKSGVTASPVGS-SLNHLSGTITGPDGTPYEKGVFKIDIQIPTSYPFEPPKMKFVTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQP 117 M DF+R+QKEL+EC++D ++SG+ SP G SL L GTI GP GTPYE G F+IDI +P +YPFEPPKMKF TK+WHPNISSQSGAICLDILKDQWSPALT+KTAL+S+QALL PQP Sbjct: 1 MVDFARVQKELQECSRDVERSGIKVSPKGDGSLARLIGTIPGPTGTPYEGGTFQIDIALPDAYPFEPPKMKFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQP 119
BLAST of EWM21093.1 vs. NCBI_GenBank
Match: gi|848884945|ref|XP_012842730.1| (PREDICTED: ubiquitin-conjugating enzyme E2 27 [Erythranthe guttata] >gi|604326946|gb|EYU32921.1| hypothetical protein MIMGU_mgv1a014267mg [Erythranthe guttata]) HSP 1 Score: 178.333 bits (451), Expect = 2.918e-54 Identity = 84/119 (70.59%), Postives = 99/119 (83.19%), Query Frame = 0 Query: 1 MGDFSRIQKELRECAKD-QKSGVTASPVG-SSLNHLSGTITGPDGTPYEKGVFKIDIQIPTSYPFEPPKMKFVTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQP 117 M DF+R+QKEL+EC +D Q SG+ SP+ ++L HL GTI GP GTPYE G FKIDI +P YPFEPPKMKF TK+WHPN+SSQSGAICLDILKDQWSPALT+KTAL+S+QALL P+P Sbjct: 1 MVDFARVQKELQECNRDFQVSGIKVSPMAETNLAHLLGTIPGPLGTPYEGGTFKIDITLPDGYPFEPPKMKFATKVWHPNVSSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPEP 119 The following BLAST results are available for this feature:
BLAST of EWM21093.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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