rna9608, rna9608 (mRNA) Nannochloropsis gaditana

Overview
Namerna9608
Unique Namerna9608
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length612
Alignment locationKK037254.1:276470..277178 -

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Properties
Property NameValue
ProductCDP-alcohol phosphatidyltransferase
Orig transcript idgnl|cribi|Naga_101646g1.9912.mrna
Orig protein idgnl|cribi|Naga_101646g1.9912
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:276470..277178 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101646g1gene9326Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9608rna9608-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21096.1cds9577Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9608 ID=rna9608|Name=rna9608|organism=Nannochloropsis gaditana|type=mRNA|length=612bp
CGGGTGGCCCTAGCCTCGGTGACACCGGGTCCCCGCCCCCCTTCCCCTTC
TCTTCCCTCCCTCCTTCTCGCGCCCGTCTCAATCCACATGAGCGTTCCCG
AGGGAGGACGCGCCTCCGCTTCCTCCCCCGCACCCTCCCCCCGCCCCTCC
TCCCTCCCCATCGCCATGTCCAACGGAATCCGGCAAGCTAGCAGGCCCCG
GCGGTTGGCGGTGGTGGAGGAGGGGGAGAGAGGGGGGGAGGGAGGGCTGG
AGGGAGGGGCGGGAGGGGATGCCCTCGGTCGGTTCCTGGCCGGTCTCTCT
GTCCATTCCCTCCCCACCCCGGCGTCGGCGGACAGAAGAGAGTCAGAGGA
GAAGAGAAGGCGGCGGGAGCGGAGGGAGAAGAAGGTGATGGCGGCCTACA
AGGAGCGAGTGAGGGCGATGCGGGAGGAGCTCGAGGAGCTGGAGGCGAGG
GTAGCGCGGGCAAGGGAGGAGGTGGGCCGCGCGGAGAGGGCCGGGGGGGG
GGAGGGCGGGCGGAGGTGGCGGGGGAGGGTAAACAGGAGAAGGAGAAAGG
AAAGGGTGAGATGGTGGTAGATTCATCGTCTGGGGAGCCCTCCTGCCTCC
TCAAGGCGCGCC
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protein sequence of rna9608

>rna9608-protein ID=rna9608-protein|Name=rna9608|organism=Nannochloropsis gaditana|type=polypeptide|length=202bp
MAARAPRPLRDRDLRPVLSPPRHASLDEPVRLPVLLYVPNLLCYARLLLS
IYGLSMVIQTVLRQQEASRRALLAGEAANCSVQAVVQMATHYAAHAGYTT
GLLAPIATTLLGKALAQASSALLRDMERRAGGAGETEALSTVEPDLLAAL
VVFLAAGALDLLDGVAARRMKQCSRLGALLDVVADNVLRGCITGSRGVTG
RK
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mRNA from alignment at KK037254.1:276470..277178-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9608 ID=rna9608|Name=rna9608|organism=Nannochloropsis gaditana|type=mRNA|length=709bp|location=Sequence derived from alignment at KK037254.1:276470..277178- (Nannochloropsis gaditana)
ATGGCCGCCAGAGCACCGCGTCCTCTGCGCGACCGAGATTTAAGACCCGT
CCTTTCCCCTCCAAGACATGCCTCGCTGGACGAGCCTGTGAGGCTTCCTG
TGCTTCTTTACGTCCCAAATCTGCTCTGTTATGCCCGCCTCCTCCTCAGC
ATCTACGGCCTCTCCATGGTAATCCAGACAGTCTTGCGTCAACAGGAAGC
TTCTCGCCGCGCTCTCTTGGCCGGAGAAGCAGCAAATTGCTCAGTGCAGG
CTGTCGTGCAGATGGCGACACATTACGCTGCCCATGCCGGCTATACTACG
GGCTTGCTCGCCCCCATCGCCACCACGCTCCTGGGGAAGGCCTTGGCGCA
GGCGTCCTCCGCCCTCCTGCGTGACATGGAGCGGCGCGCAGGCGGCGCGG
GCGAGACAGAGGCTCTCTCCACCGTGGAGCCCGACCTCCTGGCCGCCCTG
GTGGTTTTTCTGGCGGCTGGGGCCTTGGACCTGTTGGACGGGGTGGCGGC
CCGCCGGATGAAGCAATGCTCGCGCCTGGGGGCCCTCCTGGACGTGGTCG
CCGACAACGTTCTCCGCGGATGCATGTGGGTGTCTTCCGCTCTCCTCGAT
GCGCGCACGGCCCTCCCCGCGCTCATCTGCATCAGCGTCGAGTGGCTGAC
CCTCCTGGCCTCGCAGCTCTTACAGCACCGGGAGCAGGGGCGTCACTGGA
AGAAAGTGA
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Coding sequence (CDS) from alignment at KK037254.1:276470..277178-

>rna9608 ID=rna9608|Name=rna9608|organism=Nannochloropsis gaditana|type=CDS|length=1218bp|location=Sequence derived from alignment at KK037254.1:276470..277178- (Nannochloropsis gaditana)
CACCGGGAGCAGGGGCGTCACTGGAAGAAAGTGAATGGCCGCCAGAGCAC
CGCGTCCTCTGCGCGACCGAGATTTAAGACCCGTCCTTTCCCCTCCAAGA
CATGCCTCGCTGGACGAGCCTGTGAGGCTTCCTGTGCTTCTTTACGTCCC
AAATCTGCTCTGTTATGCCCGCCTCCTCCTCAGCATCTACGGCCTCTCCA
TGGTAATCCAGACAGTCTTGCGTCAACAGGAAGCTTCTCGCCGCGCTCTC
TTGGCCGGAGAAGCAGCAAATTGCTCAGTGCAGGCTGTCGTGCAGATGGC
GACACATTACGCTGCCCATGCCGGCTATACTACGGGCTTGCTCGCCCCCA
TCGCCACCACGCTCCTGGGGAAGGCCTTGGCGCAGGCGTCCTCCGCCCTC
CTGCGTGACATGGAGCGGCGCGCAGGCGGCGCGGGCGAGACAGAGGCTCT
CTCCACCGTGGAGCCCGACCTCCTGGCCGCCCTGGTGGTTTTTCTGGCGG
CTGGGGCCTTGGACCTGTTGGACGGGGTGGCGGCCCGCCGGATGAAGCAA
TGCTCGCGCCTGGGGGCCCTCCTGGACGTGGTCGCCGACAACGTTCTCCG
CGGATGCATCACCGGGAGCAGGGGCGTCACTGGAAGAAAGTGAATGGCCG
CCAGAGCACCGCGTCCTCTGCGCGACCGAGATTTAAGACCCGTCCTTTCC
CCTCCAAGACATGCCTCGCTGGACGAGCCTGTGAGGCTTCCTGTGCTTCT
TTACGTCCCAAATCTGCTCTGTTATGCCCGCCTCCTCCTCAGCATCTACG
GCCTCTCCATGGTAATCCAGACAGTCTTGCGTCAACAGGAAGCTTCTCGC
CGCGCTCTCTTGGCCGGAGAAGCAGCAAATTGCTCAGTGCAGGCTGTCGT
GCAGATGGCGACACATTACGCTGCCCATGCCGGCTATACTACGGGCTTGC
TCGCCCCCATCGCCACCACGCTCCTGGGGAAGGCCTTGGCGCAGGCGTCC
TCCGCCCTCCTGCGTGACATGGAGCGGCGCGCAGGCGGCGCGGGCGAGAC
AGAGGCTCTCTCCACCGTGGAGCCCGACCTCCTGGCCGCCCTGGTGGTTT
TTCTGGCGGCTGGGGCCTTGGACCTGTTGGACGGGGTGGCGGCCCGCCGG
ATGAAGCAATGCTCGCGCCTGGGGGCCCTCCTGGACGTGGTCGCCGACAA
CGTTCTCCGCGGATGCAT
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Synonyms
Publications