EWM21096.1, cds9577 (CDS) Nannochloropsis gaditana

Overview
NameEWM21096.1
Unique Namecds9577
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:276604..277178 -
Alignment locationKK037254.1:276470..276503 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21096.1
ProductCDP-alcohol phosphatidyltransferase
Orig transcript idgnl|cribi|Naga_101646g1.9912.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:276604..277178 -
KK037254.1supercontigKK037254.1:276470..276503 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0008654phospholipid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016780phosphotransferase activity, for other substituted phosphate groups
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR000462CDP-OH_P_trans
Homology
[Close]
BLAST of EWM21096.1 vs. NCBI_GenBank
Match: gi|585101159|gb|EWM21096.1| (CDP-alcohol phosphatidyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 393.66 bits (1010), Expect = 2.387e-138
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 
Query:    1 MAARAPRPLRDRDLRPVLSPPRHASLDEPVRLPVLLYVPNLLCYARLLLSIYGLSMVIQTVLRQQEASRRALLAGEAANCSVQAVVQMATHYAAHAGYTTGLLAPIATTLLGKALAQASSALLRDMERRAGGAGETEALSTVEPDLLAALVVFLAAGALDLLDGVAARRMKQCSRLGALLDVVADNVLRGCITGSRGVTGRK 202
            MAARAPRPLRDRDLRPVLSPPRHASLDEPVRLPVLLYVPNLLCYARLLLSIYGLSMVIQTVLRQQEASRRALLAGEAANCSVQAVVQMATHYAAHAGYTTGLLAPIATTLLGKALAQASSALLRDMERRAGGAGETEALSTVEPDLLAALVVFLAAGALDLLDGVAARRMKQCSRLGALLDVVADNVLRGCITGSRGVTGRK
Sbjct:    1 MAARAPRPLRDRDLRPVLSPPRHASLDEPVRLPVLLYVPNLLCYARLLLSIYGLSMVIQTVLRQQEASRRALLAGEAANCSVQAVVQMATHYAAHAGYTTGLLAPIATTLLGKALAQASSALLRDMERRAGGAGETEALSTVEPDLLAALVVFLAAGALDLLDGVAARRMKQCSRLGALLDVVADNVLRGCITGSRGVTGRK 202
[Close]
BLAST of EWM21096.1 vs. NCBI_GenBank
Match: gi|553181453|ref|XP_005853569.1| (CDP-diacylglycerol-inositol 3-phosphatidyltransferase, partial [Nannochloropsis gaditana CCMP526] >gi|422295491|gb|EKU22790.1| CDP-diacylglycerol-inositol 3-phosphatidyltransferase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 197.978 bits (502), Expect = 2.185e-61
Identity = 102/108 (94.44%), Postives = 103/108 (95.37%), Query Frame = 0 
Query:   88 MATHYAAHAGYTTGLLAPIATTLLGKALAQASSALLRDMERRAGGAGETEALSTVEPDLLAALVVFLAAGALDLLDGVAARRMKQCSRLGALLDVVADNVLRGCITGS 195
            MATHYAAHAGYTTGLLAPIATTLLGKALAQASSALLRDMERRAG  GETEAL TVEPDLLAALVVFLAAGALDLLDGVAARRMKQCSRLGALLDVVADNVLRGC+  S
Sbjct:    1 MATHYAAHAGYTTGLLAPIATTLLGKALAQASSALLRDMERRAGSTGETEALPTVEPDLLAALVVFLAAGALDLLDGVAARRMKQCSRLGALLDVVADNVLRGCMWVS 108
The following BLAST results are available for this feature:
BLAST of EWM21096.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585101159|gb|EWM21096.1|2.387e-138100.00CDP-alcohol phosphatidyltransferase [Nannochlorops... [more]
gi|553181453|ref|XP_005853569.1|2.185e-6194.44CDP-diacylglycerol-inositol 3-phosphatidyltransfer... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9608rna9608Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications