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Properties
| Property Name | Value |
|---|
| Product | heat domain-containing protein |
| Orig transcript id | gnl|cribi|Naga_100319g1.4365.mrna |
| Orig protein id | gnl|cribi|Naga_100319g1.4365 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037254.1 | supercontig | KK037254.1:172895..173826 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9561 ID=rna9561|Name=rna9561|organism=Nannochloropsis gaditana|type=mRNA|length=2032bp
GAGGCTTGCGTGGCGGTGAATGAGGCCCCAGTTCCCGGCCTTAGGAAGGC
CACCGTCTCCAAGAAGCAGTGTACCAATGCCACTTGGTGTCTCCCGAAGG
GCTTCGCTTCATCTGCCGTGCCCTCTGCCGCCAAGCCCACCAACAAGGCC
CAGCCTAAAGCATTTTTGGCTTCAGCAGGCAAGCGAGGGCACCCTATCTC
CAAGAATACTAATGCAAAATTTTTTGTGAATGCTCCATTGACGGGTGAAC
GAGCTTTTTCGAGCAGGACGTCGCATGGAACTTGCAGTTTGTTGTCTGCT
CGGAGACGCTTGAGAAGGTGGGAGCAGCACTCTACTACCTTATTTCTGAT
TCCTTCGTCCGAAGTAGTGGACATTAGGTCCATGAGCATGGGCAAATGCA
AGCGTATGAGGCCTTCTATCCGACTGTCCTCCGCCATAACGAGACGGAAG
AGTAGCTTGTCCAAGTCATCCCTGGTGGGCCCGCTGGGTGAGGCCATACA
GCAAGGGTCCAAAGAACGGCGACAAGGGGCGAATAGGACTTCGACCCCGG
CTAAAATCGCAAAACGCCTCAGTAAAAGGTGTATGTAGCCCCTGTATTCC
AGTGTGTGCATGGATGGTGTTAAAAGAATTTGTTCCACACTCAGCTTTAT
GCATGTCTTCTGGTTTTTCGAGTGGAAAGTCGATACCGCGCGAGGACAGC
CGCTTGTCAGAAACTACGCCCGCAGCGGGATTTCCGGCGTCAGCGGCAGG
AACAACGGCAACAGCAACAGAAAGGGGGCAAAATGAAGACTCCACCATCA
CGCCCGCAAGTGCGCACTCCGATCAAGAAATCGTCGTCTCTCCTCACGTG
ACAAAATCGCTTTTGAATGAGGACCTTTGGATACATGTTCTGGCTTTTTT
ACCGCTGGTGGACGTGGTCAAAGGAACCCTCGAGGTCTCAAGAAGCTGGA
ACGTGATGGCGAAACAGAACGAAATCTGGAAACTATTTTGTGACAAACGA
TGGCCGTGGATGGCTCTGGCGGAAACACAGGACGTTGGGGAAGGAGGGAC
GGGGGAGGCACGTTGGACAAACCCATGTGCCACGTCTGGGTCATGCGGGC
GGGGCGCGGCATTTCGAGAACCTGGCACCCTGTATCGCCTCTACAACCAA
CGGGCTTGTGCCCGACACCGTGTTTGTTACCCTCCCCCTTTACGAAAGTT
CACTGACTTCGACCTGGCCGTTGATCTCCGGTCGCGGTTGACCAACCAAG
TCATTTATTCCTGCCGGGGGATGTTGGATGAGGACGGGCTCGGAGTCGAC
CTCTTCACTTTCTCGGGGTGGGTTATGACCACGGATGTCGTGGCCGTTGA
TGAAGAACTCCTCTTCGAGAATTTGTCGGCAGCCATGGCTTTTTTCGGAG
AGCAAGGACCATGTGAACTTGATTTCACAGTCATAGATAGAGTGAATGGG
AAGGTGGCTGAACTTGCAACGGTTTCGCGTTTCGGCACATCCGACGGCTA
CACAGGACGCACCTCGGCGAGGGCGACAACGCGATGTTCGCTTGGTTGGA
ACGTGGAGGGCCAGCGGACCGAGGAAGAGCTGTGGGTCTTCCTTGTACCA
GACGCGGTTTTTGTCGAAGGAAATTTGCGCTTGATGAGGGGTTTGACTGT
GAAGGTGGAGAAGGTGGTAGGATATGTGGGTGCTCGAGAAAGAGATGGCT
CCGGCGAGAATGCCCAGACGTCTCAGGGAAGGAAGGGAGAAGAGTCAAGA
GACAGAGAAAAAAAGACTATAGAGCTTGTTCGGTGTCGGGTAATAGAAGT
GTGGATGTGCGATCATCAGTATCTCAACGCGCAAAATATGGTTTCACTAG
AGGTAGCGAGAATTTTCGATGAGCTCCACTGGGTATGAAAAAAAACGGTG
CAAAAAAATCTCGAGAGATATCTCAGCAGTAACAAAAAAGCATGTGCTTG
TATGTGGTGTGGACCATAATTTCTTCTTCATGCTGCGCTTATTAAACCAC
GCAAACGGCGGAAGATGTTCAAAGATTGTTCC back to topprotein sequence of rna9561 >rna9561-protein ID=rna9561-protein|Name=rna9561|organism=Nannochloropsis gaditana|type=polypeptide|length=149bp
MASPSGPTRDDLDKLLFRLVMAEDSRIEGLIRLHLPMLMDLMSTTSDEGI
RNKVVECCSHLLKRLRADNKLQVPCDVLLEKARSPVNGAFTKNFALVFLE
IGCPRLPAEAKNALGWALLVGLAAEGTADEAKPFGRHQVALRDPRQGAS back to topmRNA from alignment at KK037254.1:172895..173826+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9561 ID=rna9561|Name=rna9561|organism=Nannochloropsis gaditana|type=mRNA|length=932bp|location=Sequence derived from alignment at KK037254.1:172895..173826+ (Nannochloropsis gaditana)
ATGGCCTCACCCAGCGGGCCCACCAGGGATGACTTGGACAAGCTACTCTT
CCGTCTCGTTATGGCGGAGGACAGTCGGATAGAAGGCCTCATACGCTTGC
ATTTGCCCATGCTCATGGACCTAATGTCCACTACTTCGGACGAAGGAATC
AGAAATAAGGTAGTAGAGTGCTGCTCCCACCTTCTCAAGCGTCTCCGAGC
AGACAACAAACTGCAAGTTCCATGCGACGTCCTGCTCGAAAAAGCTCGTT
CACCCGTCAATGGAGCATTCACAAAAAATTTTGCATTAGTATTCTTGGAG
ATAGGGTGCCCTCGCTTGCCTGCTGAAGCCAAAAATGCTTTAGGCTGGGC
CTTGTTGGTGGGCTTGGCGGCAGAGGGCACGGCAGATGAAGCGAAGCCCT
TCGGGAGACACCAAGTGGCATTGGTACACTGCTTCTTGGAGACGGTGGCC
TTCCTAAGGCCGGGAACTGGGGCCTCATTCACCGCCACGCAAGCCTCAGC
GTCTTCCATGACGGCTCCCTCGTCGGGGACCAGGTCGCCCGTCAGGGAGG
ACGCTGGCCAGACTCCGCTTGGGAGCCGCGTGTCCGAATGCACCCTGCCC
CACCCATCCGCTCAAGacatggccttcctccgcgagctcttcctcgacat
cctccttgtccccaacgcctcccgcctcctcccctccgcccctgaCAGCg
ccccctccgtgcccccTCCGGGGCTTTCTCCCGACGCCCTCCATCGAATC
TcatcccacccctccctctggagTCCAGGCTCGCCATCCGGAAATCCACA
AGTCACGCTGGCATTGATGAAGCTGGAGGTCTTGCGCCTCCTGCACTCGT
CGCTCtttaccttctcctcctccctccccctcctcctcctcgccacgTGC
GACAGCGAGACCCGCGTCAAGGAGCGAGCTGA back to topCoding sequence (CDS) from alignment at KK037254.1:172895..173826+ >rna9561 ID=rna9561|Name=rna9561|organism=Nannochloropsis gaditana|type=CDS|length=900bp|location=Sequence derived from alignment at KK037254.1:172895..173826+ (Nannochloropsis gaditana)
ATGGCCTCACCCAGCGGGCCCACCAGGGATGACTTGGACAAGCTACTCTT
CCGTCTCGTTATGGCGGAGGACAGTCGGATAGAAGGCCTCATACGCTTGC
ATTTGCCCATGCTCATGGACCTAATGTCCACTACTTCGGACGAAGGAATC
AGAAATAAGGTAGTAGAGTGCTGCTCCCACCTTCTCAAGCGTCTCCGAGC
AGACAACAAACTGCAAGTTCCATGCGACGTCCTGCTCGAAAAAGCTCGTT
CACCCGTCAATGGAGCATTCACAAAAAATTTTGCATTAGTATTCTTGGAG
ATAGGGTGCCCTCGCTTGCCTGCTGAAGCCAAAAATGCTTTAGGCTGGGC
CTTGTTGGTGGGCTTGGCGGCAGAGGGCACGGCAGATGAAGCGAAGCCCT
TCGGGAGACACCAAGTGGCATTGCGAGACCCGCGTCAAGGAGCGAGCTGA
ATGGCCTCACCCAGCGGGCCCACCAGGGATGACTTGGACAAGCTACTCTT
CCGTCTCGTTATGGCGGAGGACAGTCGGATAGAAGGCCTCATACGCTTGC
ATTTGCCCATGCTCATGGACCTAATGTCCACTACTTCGGACGAAGGAATC
AGAAATAAGGTAGTAGAGTGCTGCTCCCACCTTCTCAAGCGTCTCCGAGC
AGACAACAAACTGCAAGTTCCATGCGACGTCCTGCTCGAAAAAGCTCGTT
CACCCGTCAATGGAGCATTCACAAAAAATTTTGCATTAGTATTCTTGGAG
ATAGGGTGCCCTCGCTTGCCTGCTGAAGCCAAAAATGCTTTAGGCTGGGC
CTTGTTGGTGGGCTTGGCGGCAGAGGGCACGGCAGATGAAGCGAAGCCCT
TCGGGAGACACCAAGTGGCATTGCGAGACCCGCGTCAAGGAGCGAGCTGA back to top
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