EWM21143.1, cds9530 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21143.1 vs. NCBI_GenBank
Match: gi|585101211|gb|EWM21143.1| (heat domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 303.138 bits (775), Expect = 3.223e-104 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
Query: 1 MASPSGPTRDDLDKLLFRLVMAEDSRIEGLIRLHLPMLMDLMSTTSDEGIRNKVVECCSHLLKRLRADNKLQVPCDVLLEKARSPVNGAFTKNFALVFLEIGCPRLPAEAKNALGWALLVGLAAEGTADEAKPFGRHQVALRDPRQGAS 149
MASPSGPTRDDLDKLLFRLVMAEDSRIEGLIRLHLPMLMDLMSTTSDEGIRNKVVECCSHLLKRLRADNKLQVPCDVLLEKARSPVNGAFTKNFALVFLEIGCPRLPAEAKNALGWALLVGLAAEGTADEAKPFGRHQVALRDPRQGAS
Sbjct: 1 MASPSGPTRDDLDKLLFRLVMAEDSRIEGLIRLHLPMLMDLMSTTSDEGIRNKVVECCSHLLKRLRADNKLQVPCDVLLEKARSPVNGAFTKNFALVFLEIGCPRLPAEAKNALGWALLVGLAAEGTADEAKPFGRHQVALRDPRQGAS 149
BLAST of EWM21143.1 vs. NCBI_GenBank
Match: gi|553186496|ref|XP_005854430.1| (heat domain-containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294629|gb|EKU21929.1| heat domain-containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 287.73 bits (735), Expect = 2.171e-96 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
Query: 1 MASPSGPTRDDLDKLLFRLVMAEDSRIEGLIRLHLPMLMDLMSTTSDEGIRNKVVECCSHLLKRLRADNKLQVPCDVLLEKARSPVNGAFTKNFALVFLEIGCPRLPAEAKNALGWALLVGLAAEGTADEAKPFGRHQVAL 141
MASPSGPTRDDLDKLLFRLVMAEDSRIEGLIRLHLPMLMDLMSTTSDEGIRNKVVECCSHLLKRLRADNKLQVPCDVLLEKARSPVNGAFTKNFALVFLEIGCPRLPAEAKNALGWALLVGLAAEGTADEAKPFGRHQVAL
Sbjct: 39 MASPSGPTRDDLDKLLFRLVMAEDSRIEGLIRLHLPMLMDLMSTTSDEGIRNKVVECCSHLLKRLRADNKLQVPCDVLLEKARSPVNGAFTKNFALVFLEIGCPRLPAEAKNALGWALLVGLAAEGTADEAKPFGRHQVAL 179
BLAST of EWM21143.1 vs. NCBI_GenBank
Match: gi|1197681164|ref|XP_021136457.1| (proteasome-associated protein ECM29 homolog [Columba livia]) HSP 1 Score: 79.337 bits (194), Expect = 3.177e-16 Identity = 45/125 (36.00%), Postives = 74/125 (59.20%), Query Frame = 0
Query: 10 DDLDKLLFRLVMAE-DSRIEGLIRLHLPMLMDLMSTTSDEGIRNKVVECCSHLLKRLRADNKLQVPCDVLLEKARSPVNGAFTKNFALVFLEIGCPRLPAEAKNALGWALLVGLAAEGTADEAKP 133
D L+++ RL AE D +++ +I LP ++ +S+T EG+R KV+E HL KR+++ K+Q+P + LL + + P +F NF ++++++G PRLP E + L LL TA E KP
Sbjct: 4 DQLERVFLRLGHAETDEQLQNIISKFLPPVLLKLSSTQ-EGVRKKVMELLVHLNKRIKSRPKIQLPVETLLVQYQDPSAVSFVTNFTIIYVKMGYPRLPVEKQCELAPTLL-------TAMEGKP 120
BLAST of EWM21143.1 vs. NCBI_GenBank
Match: gi|676271764|gb|KFO26732.1| (Proteasome-associated protein ECM29 like protein [Fukomys damarensis]) HSP 1 Score: 83.1889 bits (204), Expect = 1.040e-15 Identity = 49/134 (36.57%), Postives = 79/134 (58.96%), Query Frame = 0
Query: 1 MASPSGPTRDDLDKLLFRLVMAE-DSRIEGLIRLHLPMLMDLMSTTSDEGIRNKVVECCSHLLKRLRADNKLQVPCDVLLEKARSPVNGAFTKNFALVFLEIGCPRLPAEAKNALGWALLVGLAAEGTADEAKP 133
MAS G + D L+++ RL AE D +++ +I LP ++ +S+T EG+R KV+E HL KR+++ K+Q+P + LL + + P +F NF ++++++G PRLP E + L LL TA E KP
Sbjct: 1 MASMVGRSVDQLERVFLRLGHAETDEQLQNIISKFLPPVLLKLSST-QEGVRKKVMELLVHLNKRIKSRPKIQLPVETLLVQYQDPAAVSFVTNFTIIYVKMGYPRLPVEKQCELAPTLL-------TAMEGKP 126
BLAST of EWM21143.1 vs. NCBI_GenBank
Match: gi|955501692|ref|XP_014637550.1| (PREDICTED: proteasome-associated protein ECM29 homolog isoform X2 [Ceratotherium simum simum]) HSP 1 Score: 81.2629 bits (199), Expect = 4.340e-15 Identity = 46/126 (36.51%), Postives = 75/126 (59.52%), Query Frame = 0
Query: 9 RDDLDKLLFRLVMAE-DSRIEGLIRLHLPMLMDLMSTTSDEGIRNKVVECCSHLLKRLRADNKLQVPCDVLLEKARSPVNGAFTKNFALVFLEIGCPRLPAEAKNALGWALLVGLAAEGTADEAKP 133
RD L+++ RL AE D +++ +I LP ++ +S+T EG+R KV+E HL KR+++ K+Q+P + LL + + P +F NF ++++++G PRLP E + L LL TA E KP
Sbjct: 7 RDQLERVFLRLGHAETDEQLQSIISKFLPPVLLKLSST-QEGVRKKVMELLVHLNKRIKSRPKIQLPVETLLVQYQDPAAVSFVTNFTIIYVKMGYPRLPVEKQCELAPTLL-------TAMEGKP 124
BLAST of EWM21143.1 vs. NCBI_GenBank
Match: gi|26334583|dbj|BAC30992.1| (unnamed protein product [Mus musculus]) HSP 1 Score: 80.4925 bits (197), Expect = 4.346e-15 Identity = 46/130 (35.38%), Postives = 76/130 (58.46%), Query Frame = 0
Query: 5 SGPTRDDLDKLLFRLVMAE-DSRIEGLIRLHLPMLMDLMSTTSDEGIRNKVVECCSHLLKRLRADNKLQVPCDVLLEKARSPVNGAFTKNFALVFLEIGCPRLPAEAKNALGWALLVGLAAEGTADEAKP 133
+G D L+++ RL AE D +++ +I LP ++ +S+T EG+R KV+E HL KR+++ K+Q+P + LL + + P +F NF ++++++G PRLP E + L LL TA E KP
Sbjct: 3 TGSDSDQLERVFLRLGHAETDEQLQNIISKFLPPVLLKLSST-QEGVRKKVMELLVHLNKRIKSRPKIQLPVETLLVQYQDPAAVSFVTNFTIIYVKMGYPRLPVEKQCELAPTLL-------TAMEGKP 124
BLAST of EWM21143.1 vs. NCBI_GenBank
Match: gi|148670274|gb|EDL02221.1| (expressed sequence AI314180, isoform CRA_b, partial [Mus musculus]) HSP 1 Score: 81.2629 bits (199), Expect = 4.555e-15 Identity = 46/126 (36.51%), Postives = 75/126 (59.52%), Query Frame = 0
Query: 9 RDDLDKLLFRLVMAE-DSRIEGLIRLHLPMLMDLMSTTSDEGIRNKVVECCSHLLKRLRADNKLQVPCDVLLEKARSPVNGAFTKNFALVFLEIGCPRLPAEAKNALGWALLVGLAAEGTADEAKP 133
RD L+++ RL AE D +++ +I LP ++ +S+T EG+R KV+E HL KR+++ K+Q+P + LL + + P +F NF ++++++G PRLP E + L LL TA E KP
Sbjct: 8 RDQLERVFLRLGHAETDEQLQNIISKFLPPVLLKLSST-QEGVRKKVMELLVHLNKRIKSRPKIQLPVETLLVQYQDPAAVSFVTNFTIIYVKMGYPRLPVEKQCELAPTLL-------TAMEGKP 125
BLAST of EWM21143.1 vs. NCBI_GenBank
Match: gi|1016692393|ref|XP_016069196.1| (PREDICTED: proteasome-associated protein ECM29 homolog isoform X3 [Miniopterus natalensis]) HSP 1 Score: 81.2629 bits (199), Expect = 4.800e-15 Identity = 46/126 (36.51%), Postives = 75/126 (59.52%), Query Frame = 0
Query: 9 RDDLDKLLFRLVMAE-DSRIEGLIRLHLPMLMDLMSTTSDEGIRNKVVECCSHLLKRLRADNKLQVPCDVLLEKARSPVNGAFTKNFALVFLEIGCPRLPAEAKNALGWALLVGLAAEGTADEAKP 133
RD L+++ RL AE D +++ +I LP ++ +S+T EG+R KV+E HL KR+++ K+Q+P + LL + + P +F NF ++++++G PRLP E + L LL TA E KP
Sbjct: 7 RDQLERVFLRLGHAETDEQLQNIISKFLPPVLLKLSST-QEGVRKKVMELLVHLNKRIKSRPKIQLPIETLLVQYQDPAAVSFVTNFTIIYVKMGYPRLPVEKQCELAPTLL-------TAMEGKP 124
BLAST of EWM21143.1 vs. NCBI_GenBank
Match: gi|744542528|ref|XP_010987065.1| (PREDICTED: proteasome-associated protein ECM29 homolog [Camelus dromedarius]) HSP 1 Score: 81.2629 bits (199), Expect = 4.932e-15 Identity = 46/126 (36.51%), Postives = 75/126 (59.52%), Query Frame = 0
Query: 9 RDDLDKLLFRLVMAE-DSRIEGLIRLHLPMLMDLMSTTSDEGIRNKVVECCSHLLKRLRADNKLQVPCDVLLEKARSPVNGAFTKNFALVFLEIGCPRLPAEAKNALGWALLVGLAAEGTADEAKP 133
RD L+++ RL AE D +++ +I LP ++ +S+T EG+R KV+E HL KR+++ K+Q+P + LL + + P +F NF ++++++G PRLP E + L LL TA E KP
Sbjct: 7 RDQLERVFLRLGHAETDEQLQNIISKFLPPVLLKLSST-QEGVRKKVMELLVHLNKRIKSRPKIQLPVETLLVQYQDPAAVSFVTNFTIIYVKMGYPRLPVEKQCELAPTLL-------TAMEGKP 124
BLAST of EWM21143.1 vs. NCBI_GenBank
Match: gi|1131295614|ref|XP_019822275.1| (PREDICTED: proteasome-associated protein ECM29 homolog isoform X2 [Bos indicus]) HSP 1 Score: 81.2629 bits (199), Expect = 5.078e-15 Identity = 46/126 (36.51%), Postives = 75/126 (59.52%), Query Frame = 0
Query: 9 RDDLDKLLFRLVMAE-DSRIEGLIRLHLPMLMDLMSTTSDEGIRNKVVECCSHLLKRLRADNKLQVPCDVLLEKARSPVNGAFTKNFALVFLEIGCPRLPAEAKNALGWALLVGLAAEGTADEAKP 133
RD L+++ RL AE D +++ +I LP ++ +S+T EG+R KV+E HL KR+++ K+Q+P + LL + + P +F NF ++++++G PRLP E + L LL TA E KP
Sbjct: 7 RDQLERVFLRLGHAETDEQLQNIISKFLPPVLLKLSST-QEGVRKKVMELLVHLNKRIKSRPKIQLPVETLLVQYQDPAAVSFVTNFTIIYVKMGYPRLPVEKQCELAPTLL-------TAMEGKP 124 The following BLAST results are available for this feature:
BLAST of EWM21143.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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