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Properties
Property Name | Value |
Product | 26s proteasome non-atpase regulatory subunit 12 |
Orig transcript id | gnl|cribi|Naga_100319g5.4370.mrna |
Orig protein id | gnl|cribi|Naga_100319g5.4370 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KK037254.1 | supercontig | KK037254.1:166328..168216 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9558 ID=rna9558|Name=rna9558|organism=Nannochloropsis gaditana|type=mRNA|length=959bp TTACTCTAATCTCGCATCGTTATCATTGTATCTCATGAAGGTAGACCCAC AGCACAAACATGCTTCTACGCACTGCTGCAGCTTCAAGTCGCAAGGCCGT TGCCTGTTGCATGTTTCCCAAAGCTGCTTTGGGCCGACAGGGCTACACCA AGGTTCAGGTCTTGCAAGCCGCCTATTTGAGTACTGCAAGTAAAGAGACT TACACCGAACGACAAGCTAGGACAGGGCGCCCCGTCTCTCCGCATGTGAC CATCTACAAATTCCCAATCACCGCGCTCACCTCCATCTCTACGCGTGTGA CGGGTGGCGTCTTGACTGTCGGACTGACTGGTATCTCTTTGCTCGCCCTG GGCGGGGCAGATGTTCCGATGCTCATGTCGAGCCTGGGGAACTCTATGGT GGGGGTACCGGCGAAGGTCTTATTCGGCTTTCCTTTGATCTTCCATTACG GCTCAGGATTGCGGCACTTTGTACGTTTGGGTTTTGGATAGGGTGTGCAT GCAGGCAGGAAGGATCATTACGTAGAAGCTTTGAGGTGCACTAGGTTGAA TGCAGGCACGTGTCGTCCTTCCTCAGCCTGCATGAAGGGCGCTGTCAATC TTTCACACGTGTCATGCGCCCATTGATTCATCATAACTCACTAATTTTTA TCTTTCTATGTATCCGTGTGATCGTAGTTTTGGGACAACAATCCCAACTT TCTGAACAACAAGGGGGTCGCTGAAGCCTCCTACATCCTCCTCGGCTCAA CCGTCGCGATATCGTTGGTATCTGGATTTGTCACTCTGGCACCCTCCTCG TCGGACGGAAAGAAATAAACTTTCACAGTTTTGATTTTTGTTGAGTGGGG TGTGCGGAAAATGCGGCTATTCCAGGCGAATGATAGACAGGGATCCTGGC AAACATATTTGTTTAAATGGAAGAAAGAAAGGCCGATGAATGAGTCAAGG ATGAAGCAC back to topprotein sequence of rna9558 >rna9558-protein ID=rna9558-protein|Name=rna9558|organism=Nannochloropsis gaditana|type=polypeptide|length=446bp MDGQLIEKKDCSAAVAAALPEAKSLADAGKLAEAVELLLGVEKQARMGND VTSLKEVVLATIRLVREKKDWEQMNATLTQISKRRSQNKAAISAMVQEAM GPSYLDATPDVETKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEG KVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAK KVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTP VVRAEESEWRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQLPVY KEILKTYTTREIIQYPLPQLPDIESHPALTLYGHELAQHWLQQLRTRVIQ HNIRVLSAYYKKIRLSRAADLLSLDVSELENNISTLVSEGALYARIDRPA NQVSFAPTKIAEETLSDWAADISELLRLVERTTHLINKEQMLHKVV back to topmRNA from alignment at KK037254.1:166328..168216+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9558 ID=rna9558|Name=rna9558|organism=Nannochloropsis gaditana|type=mRNA|length=1889bp|location=Sequence derived from alignment at KK037254.1:166328..168216+ (Nannochloropsis gaditana) TTCGTCGTCCGTCGATCATCGGGCGAAGCAGGACTACGCAACAAGGAAAA
ATGTCACATGCAAAACCCCGCAGGGCTGTTATTTCTGTGAAAAAGCACCA
CAGAGGTAAAAAAACAGTGCACTGAATTACTCTTCTTGCGTCAAATTTTG
CTTGTCGGACTCCTACGCCTCTACTGCTTCAAAGCCTTCATCGAATTCTT
CCAGCGTTCCTCTTTCGCCAAGTTTCATTTCCCTGTCTGATGATCAGCAC
TCATTTCTTACTATAACATACAGTTTTTGGAAACTATGGACGGGCAGCTG
ATTGAAAAGAAGGATTGCTCAGCTGCAGTCGCCGCCGCGCTTCCGGAAGC
GAAATCTTTGGCCGATGCAGGCAAGCTGGCTGAAGCTGTAGAGCTCCTCC
TAGGTGTGGAGAAACAAGCGCGCATGGGTAATGATGTGACCAGCTTGAAA
GAAGTGGTCTTAGCCACAATACGACTTGtgcgagaaaagaaagatTGGGA
GCAGATGAACGCGACTTTGACCCAAATCAGCAAGCGGCGGTCGCAGAACA
AGGCCGCAATCTCAGCCATGGTGCaggaggccatgggcccTTCCTACTTG
GACGCCACCCCTGACgtggagacgaagaggaagctgaTCGTCACGCTCCG
CGATATAACGGATGGGAAAATTTTCGTAGAGACTGAGCGCGCGCGCCTTA
CCCGGACCCTTTCACACCTcttggaagcggaggggaaggtcgCCGAGGCT
TGCGATATCATCCAGGACGTCCATGTGGAGACGTATGGCTCCCTGGACAA
ACAAGAGAAGCTCGAATTTATTCTTGAGCAGATTCGTCTCACCTTGGCCA
AGAAGGACTTCATACGCACGTACATCATCGCCAAGAAGGTGACCAAGAAG
ctgttggagggggaggacccAGCCTTGCAAGCCTTGAAGCTGAAGTTCTA
TCGGCTGATGATTGAGTACCACTCACTGGCCGAGAAGGAAGCATTCGAAA
TAGCACAGCACTATCACTCCATCTATAATACTCCTGTAGTGCGtgcggag
gaaagcgagtgGCGAGCGGCGCTGAGTGCctgcgtcctctttctcattaT
CGCCCCGCATTCCAACCAGCAGAGCGATATGCTCCACCGACTCGtccggc
aggaggaggatcagCTCGCCCAGCTTCCTGTTTACAAAGAGATCCTCAAG
ACCTACACGACCCGGGAAATCATCCAATACCCTCTGCCCCAACTCCCCGA
CATCGAGTCGCACCCCGCCTTGACACTGTACGGCCATGAGCTTGCGCAAC
ACTGGCTCCAGCAGCTGCGAACTCGGGTGATTCAACACAACATCCGGGTA
CTCTCTGCGTACTACAAGAAGATTCGGTTGAGCCGCGCTGCGGACCTTTT
GTCGCTGGATGTTTCAGAGCTAGAGAATAACATCTCCACGTTGGTGAGCG
AGGGGGCCTTATACGCGCGCATCGACCGGCCCGCCAACCAAGTCAGTTTT
GCCCCGACAAAAATAGCGGAGGAGACCCTTTCAGACTGGGCGGCGGACAT
ATCGGAATTGCTTCGGTTAGTGGAGCGCACCACGCATTTAATAAATAAGG
AGCAGATGTTGCATAAGGTGGTGTAGTGGGAGtcgcaaggaggggggaac
aGGGAGAAAAGCAATGGCAGGCCACTACGGAAGGGGTAAAATTGAAATAA
CGTTTGTGTTCGAGACCAAAATAGAACGGAATGGCTCGCTCATAGTCAGA
CAACATGTTTCCGTCCCTTTTTcgattttcttctttttgaaaGGAGATTA
AGCGAGAGCCCGAATTTGTTTTTCGTTTCGAAAATCTTACGCAAACTGCC
GTGACCATACGCGGCATTGCAGAACTTGGCAACACTCCT back to topCoding sequence (CDS) from alignment at KK037254.1:166328..168216+ >rna9558 ID=rna9558|Name=rna9558|organism=Nannochloropsis gaditana|type=CDS|length=1341bp|location=Sequence derived from alignment at KK037254.1:166328..168216+ (Nannochloropsis gaditana) ATGGACGGGCAGCTGATTGAAAAGAAGGATTGCTCAGCTGCAGTCGCCGC CGCGCTTCCGGAAGCGAAATCTTTGGCCGATGCAGGCAAGCTGGCTGAAG CTGTAGAGCTCCTCCTAGGTGTGGAGAAACAAGCGCGCATGGGTAATGAT GTGACCAGCTTGAAAGAAGTGGTCTTAGCCACAATACGACTTGtgcgaga aaagaaagatTGGGAGCAGATGAACGCGACTTTGACCCAAATCAGCAAGC GGCGGTCGCAGAACAAGGCCGCAATCTCAGCCATGGTGCaggaggccatg ggcccTTCCTACTTGGACGCCACCCCTGACgtggagacgaagaggaagct gaTCGTCACGCTCCGCGATATAACGGATGGGAAAATTTTCGTAGAGACTG AGCGCGCGCGCCTTACCCGGACCCTTTCACACCTcttggaagcggagggg aaggtcgCCGAGGCTTGCGATATCATCCAGGACGTCCATGTGGAGACGTA TGGCTCCCTGGACAAACAAGAGAAGCTCGAATTTATTCTTGAGCAGATTC GTCTCACCTTGGCCAAGAAGGACTTCATACGCACGTACATCATCGCCAAG AAGGTGACCAAGAAGctgttggagggggaggacccAGCCTTGCAAGCCTT GAAGCTGAAGTTCTATCGGCTGATGATTGAGTACCACTCACTGGCCGAGA AGGAAGCATTCGAAATAGCACAGCACTATCACTCCATCTATAATACTCCT GTAGTGCGtgcggaggaaagcgagtgGCGAGCGGCGCTGAGTGCctgcgt cctctttctcattaTCGCCCCGCATTCCAACCAGCAGAGCGATATGCTCC ACCGACTCGtccggcaggaggaggatcagCTCGCCCAGCTTCCTGTTTAC AAAGAGATCCTCAAGACCTACACGACCCGGGAAATCATCCAATACCCTCT GCCCCAACTCCCCGACATCGAGTCGCACCCCGCCTTGACACTGTACGGCC ATGAGCTTGCGCAACACTGGCTCCAGCAGCTGCGAACTCGGGTGATTCAA CACAACATCCGGGTACTCTCTGCGTACTACAAGAAGATTCGGTTGAGCCG CGCTGCGGACCTTTTGTCGCTGGATGTTTCAGAGCTAGAGAATAACATCT CCACGTTGGTGAGCGAGGGGGCCTTATACGCGCGCATCGACCGGCCCGCC AACCAAGTCAGTTTTGCCCCGACAAAAATAGCGGAGGAGACCCTTTCAGA CTGGGCGGCGGACATATCGGAATTGCTTCGGTTAGTGGAGCGCACCACGC ATTTAATAAATAAGGAGCAGATGTTGCATAAGGTGGTGTAG back to top
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