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Properties
| Property Name | Value |
|---|
| Product | 26s proteasome non-atpase regulatory subunit 12 |
| Orig transcript id | gnl|cribi|Naga_100319g5.4370.mrna |
| Orig protein id | gnl|cribi|Naga_100319g5.4370 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037254.1 | supercontig | KK037254.1:166328..168216 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9558 ID=rna9558|Name=rna9558|organism=Nannochloropsis gaditana|type=mRNA|length=959bp
TTACTCTAATCTCGCATCGTTATCATTGTATCTCATGAAGGTAGACCCAC
AGCACAAACATGCTTCTACGCACTGCTGCAGCTTCAAGTCGCAAGGCCGT
TGCCTGTTGCATGTTTCCCAAAGCTGCTTTGGGCCGACAGGGCTACACCA
AGGTTCAGGTCTTGCAAGCCGCCTATTTGAGTACTGCAAGTAAAGAGACT
TACACCGAACGACAAGCTAGGACAGGGCGCCCCGTCTCTCCGCATGTGAC
CATCTACAAATTCCCAATCACCGCGCTCACCTCCATCTCTACGCGTGTGA
CGGGTGGCGTCTTGACTGTCGGACTGACTGGTATCTCTTTGCTCGCCCTG
GGCGGGGCAGATGTTCCGATGCTCATGTCGAGCCTGGGGAACTCTATGGT
GGGGGTACCGGCGAAGGTCTTATTCGGCTTTCCTTTGATCTTCCATTACG
GCTCAGGATTGCGGCACTTTGTACGTTTGGGTTTTGGATAGGGTGTGCAT
GCAGGCAGGAAGGATCATTACGTAGAAGCTTTGAGGTGCACTAGGTTGAA
TGCAGGCACGTGTCGTCCTTCCTCAGCCTGCATGAAGGGCGCTGTCAATC
TTTCACACGTGTCATGCGCCCATTGATTCATCATAACTCACTAATTTTTA
TCTTTCTATGTATCCGTGTGATCGTAGTTTTGGGACAACAATCCCAACTT
TCTGAACAACAAGGGGGTCGCTGAAGCCTCCTACATCCTCCTCGGCTCAA
CCGTCGCGATATCGTTGGTATCTGGATTTGTCACTCTGGCACCCTCCTCG
TCGGACGGAAAGAAATAAACTTTCACAGTTTTGATTTTTGTTGAGTGGGG
TGTGCGGAAAATGCGGCTATTCCAGGCGAATGATAGACAGGGATCCTGGC
AAACATATTTGTTTAAATGGAAGAAAGAAAGGCCGATGAATGAGTCAAGG
ATGAAGCAC back to topprotein sequence of rna9558 >rna9558-protein ID=rna9558-protein|Name=rna9558|organism=Nannochloropsis gaditana|type=polypeptide|length=446bp
MDGQLIEKKDCSAAVAAALPEAKSLADAGKLAEAVELLLGVEKQARMGND
VTSLKEVVLATIRLVREKKDWEQMNATLTQISKRRSQNKAAISAMVQEAM
GPSYLDATPDVETKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEG
KVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAK
KVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTP
VVRAEESEWRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQLPVY
KEILKTYTTREIIQYPLPQLPDIESHPALTLYGHELAQHWLQQLRTRVIQ
HNIRVLSAYYKKIRLSRAADLLSLDVSELENNISTLVSEGALYARIDRPA
NQVSFAPTKIAEETLSDWAADISELLRLVERTTHLINKEQMLHKVV back to topmRNA from alignment at KK037254.1:166328..168216+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9558 ID=rna9558|Name=rna9558|organism=Nannochloropsis gaditana|type=mRNA|length=1889bp|location=Sequence derived from alignment at KK037254.1:166328..168216+ (Nannochloropsis gaditana)
TTCGTCGTCCGTCGATCATCGGGCGAAGCAGGACTACGCAACAAGGAAAA
ATGTCACATGCAAAACCCCGCAGGGCTGTTATTTCTGTGAAAAAGCACCA
CAGAGGTAAAAAAACAGTGCACTGAATTACTCTTCTTGCGTCAAATTTTG
CTTGTCGGACTCCTACGCCTCTACTGCTTCAAAGCCTTCATCGAATTCTT
CCAGCGTTCCTCTTTCGCCAAGTTTCATTTCCCTGTCTGATGATCAGCAC
TCATTTCTTACTATAACATACAGTTTTTGGAAACTATGGACGGGCAGCTG
ATTGAAAAGAAGGATTGCTCAGCTGCAGTCGCCGCCGCGCTTCCGGAAGC
GAAATCTTTGGCCGATGCAGGCAAGCTGGCTGAAGCTGTAGAGCTCCTCC
TAGGTGTGGAGAAACAAGCGCGCATGGGTAATGATGTGACCAGCTTGAAA
GAAGTGGTCTTAGCCACAATACGACTTGtgcgagaaaagaaagatTGGGA
GCAGATGAACGCGACTTTGACCCAAATCAGCAAGCGGCGGTCGCAGAACA
AGGCCGCAATCTCAGCCATGGTGCaggaggccatgggcccTTCCTACTTG
GACGCCACCCCTGACgtggagacgaagaggaagctgaTCGTCACGCTCCG
CGATATAACGGATGGGAAAATTTTCGTAGAGACTGAGCGCGCGCGCCTTA
CCCGGACCCTTTCACACCTcttggaagcggaggggaaggtcgCCGAGGCT
TGCGATATCATCCAGGACGTCCATGTGGAGACGTATGGCTCCCTGGACAA
ACAAGAGAAGCTCGAATTTATTCTTGAGCAGATTCGTCTCACCTTGGCCA
AGAAGGACTTCATACGCACGTACATCATCGCCAAGAAGGTGACCAAGAAG
ctgttggagggggaggacccAGCCTTGCAAGCCTTGAAGCTGAAGTTCTA
TCGGCTGATGATTGAGTACCACTCACTGGCCGAGAAGGAAGCATTCGAAA
TAGCACAGCACTATCACTCCATCTATAATACTCCTGTAGTGCGtgcggag
gaaagcgagtgGCGAGCGGCGCTGAGTGCctgcgtcctctttctcattaT
CGCCCCGCATTCCAACCAGCAGAGCGATATGCTCCACCGACTCGtccggc
aggaggaggatcagCTCGCCCAGCTTCCTGTTTACAAAGAGATCCTCAAG
ACCTACACGACCCGGGAAATCATCCAATACCCTCTGCCCCAACTCCCCGA
CATCGAGTCGCACCCCGCCTTGACACTGTACGGCCATGAGCTTGCGCAAC
ACTGGCTCCAGCAGCTGCGAACTCGGGTGATTCAACACAACATCCGGGTA
CTCTCTGCGTACTACAAGAAGATTCGGTTGAGCCGCGCTGCGGACCTTTT
GTCGCTGGATGTTTCAGAGCTAGAGAATAACATCTCCACGTTGGTGAGCG
AGGGGGCCTTATACGCGCGCATCGACCGGCCCGCCAACCAAGTCAGTTTT
GCCCCGACAAAAATAGCGGAGGAGACCCTTTCAGACTGGGCGGCGGACAT
ATCGGAATTGCTTCGGTTAGTGGAGCGCACCACGCATTTAATAAATAAGG
AGCAGATGTTGCATAAGGTGGTGTAGTGGGAGtcgcaaggaggggggaac
aGGGAGAAAAGCAATGGCAGGCCACTACGGAAGGGGTAAAATTGAAATAA
CGTTTGTGTTCGAGACCAAAATAGAACGGAATGGCTCGCTCATAGTCAGA
CAACATGTTTCCGTCCCTTTTTcgattttcttctttttgaaaGGAGATTA
AGCGAGAGCCCGAATTTGTTTTTCGTTTCGAAAATCTTACGCAAACTGCC
GTGACCATACGCGGCATTGCAGAACTTGGCAACACTCCT back to topCoding sequence (CDS) from alignment at KK037254.1:166328..168216+ >rna9558 ID=rna9558|Name=rna9558|organism=Nannochloropsis gaditana|type=CDS|length=1341bp|location=Sequence derived from alignment at KK037254.1:166328..168216+ (Nannochloropsis gaditana)
ATGGACGGGCAGCTGATTGAAAAGAAGGATTGCTCAGCTGCAGTCGCCGC
CGCGCTTCCGGAAGCGAAATCTTTGGCCGATGCAGGCAAGCTGGCTGAAG
CTGTAGAGCTCCTCCTAGGTGTGGAGAAACAAGCGCGCATGGGTAATGAT
GTGACCAGCTTGAAAGAAGTGGTCTTAGCCACAATACGACTTGtgcgaga
aaagaaagatTGGGAGCAGATGAACGCGACTTTGACCCAAATCAGCAAGC
GGCGGTCGCAGAACAAGGCCGCAATCTCAGCCATGGTGCaggaggccatg
ggcccTTCCTACTTGGACGCCACCCCTGACgtggagacgaagaggaagct
gaTCGTCACGCTCCGCGATATAACGGATGGGAAAATTTTCGTAGAGACTG
AGCGCGCGCGCCTTACCCGGACCCTTTCACACCTcttggaagcggagggg
aaggtcgCCGAGGCTTGCGATATCATCCAGGACGTCCATGTGGAGACGTA
TGGCTCCCTGGACAAACAAGAGAAGCTCGAATTTATTCTTGAGCAGATTC
GTCTCACCTTGGCCAAGAAGGACTTCATACGCACGTACATCATCGCCAAG
AAGGTGACCAAGAAGctgttggagggggaggacccAGCCTTGCAAGCCTT
GAAGCTGAAGTTCTATCGGCTGATGATTGAGTACCACTCACTGGCCGAGA
AGGAAGCATTCGAAATAGCACAGCACTATCACTCCATCTATAATACTCCT
GTAGTGCGtgcggaggaaagcgagtgGCGAGCGGCGCTGAGTGCctgcgt
cctctttctcattaTCGCCCCGCATTCCAACCAGCAGAGCGATATGCTCC
ACCGACTCGtccggcaggaggaggatcagCTCGCCCAGCTTCCTGTTTAC
AAAGAGATCCTCAAGACCTACACGACCCGGGAAATCATCCAATACCCTCT
GCCCCAACTCCCCGACATCGAGTCGCACCCCGCCTTGACACTGTACGGCC
ATGAGCTTGCGCAACACTGGCTCCAGCAGCTGCGAACTCGGGTGATTCAA
CACAACATCCGGGTACTCTCTGCGTACTACAAGAAGATTCGGTTGAGCCG
CGCTGCGGACCTTTTGTCGCTGGATGTTTCAGAGCTAGAGAATAACATCT
CCACGTTGGTGAGCGAGGGGGCCTTATACGCGCGCATCGACCGGCCCGCC
AACCAAGTCAGTTTTGCCCCGACAAAAATAGCGGAGGAGACCCTTTCAGA
CTGGGCGGCGGACATATCGGAATTGCTTCGGTTAGTGGAGCGCACCACGC
ATTTAATAAATAAGGAGCAGATGTTGCATAAGGTGGTGTAG back to top
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