EWM21148.1, cds9527 (CDS) Nannochloropsis gaditana

Overview
NameEWM21148.1
Unique Namecds9527
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:166613..167953 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21148.1
Product26s proteasome non-atpase regulatory subunit 12
Orig transcript idgnl|cribi|Naga_100319g5.4370.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:166613..167953 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011991WHTH_DNA-bd_dom
IPR000717PCI_dom
Homology
BLAST of EWM21148.1 vs. NCBI_GenBank
Match: gi|585101216|gb|EWM21148.1| (26s proteasome non-atpase regulatory subunit 12 [Nannochloropsis gaditana])

HSP 1 Score: 907.901 bits (2345), Expect = 0.000e+0
Identity = 446/446 (100.00%), Postives = 446/446 (100.00%), Query Frame = 0
Query:    1 MDGQLIEKKDCSAAVAAALPEAKSLADAGKLAEAVELLLGVEKQARMGNDVTSLKEVVLATIRLVREKKDWEQMNATLTQISKRRSQNKAAISAMVQEAMGPSYLDATPDVETKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEGKVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAKKVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEESEWRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQLPVYKEILKTYTTREIIQYPLPQLPDIESHPALTLYGHELAQHWLQQLRTRVIQHNIRVLSAYYKKIRLSRAADLLSLDVSELENNISTLVSEGALYARIDRPANQVSFAPTKIAEETLSDWAADISELLRLVERTTHLINKEQMLHKVV 446
            MDGQLIEKKDCSAAVAAALPEAKSLADAGKLAEAVELLLGVEKQARMGNDVTSLKEVVLATIRLVREKKDWEQMNATLTQISKRRSQNKAAISAMVQEAMGPSYLDATPDVETKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEGKVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAKKVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEESEWRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQLPVYKEILKTYTTREIIQYPLPQLPDIESHPALTLYGHELAQHWLQQLRTRVIQHNIRVLSAYYKKIRLSRAADLLSLDVSELENNISTLVSEGALYARIDRPANQVSFAPTKIAEETLSDWAADISELLRLVERTTHLINKEQMLHKVV
Sbjct:    1 MDGQLIEKKDCSAAVAAALPEAKSLADAGKLAEAVELLLGVEKQARMGNDVTSLKEVVLATIRLVREKKDWEQMNATLTQISKRRSQNKAAISAMVQEAMGPSYLDATPDVETKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEGKVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAKKVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEESEWRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQLPVYKEILKTYTTREIIQYPLPQLPDIESHPALTLYGHELAQHWLQQLRTRVIQHNIRVLSAYYKKIRLSRAADLLSLDVSELENNISTLVSEGALYARIDRPANQVSFAPTKIAEETLSDWAADISELLRLVERTTHLINKEQMLHKVV 446          
BLAST of EWM21148.1 vs. NCBI_GenBank
Match: gi|299115380|emb|CBN74209.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 461.07 bits (1185), Expect = 3.804e-157
Identity = 231/447 (51.68%), Postives = 324/447 (72.48%), Query Frame = 0
Query:    1 MDGQLIEKKDCSAAVAAALPEAKSLADAGKLAEAVELLLGVEKQARMGNDVTSLKEVVLATIRLVREKKDWEQMNATLTQISKRRSQNKAAISAMVQEAMGPSYLDATPDVETKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEGKVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAKKVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEES-EWRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQLPVYKEILKTYTTREIIQYPLPQLPDIESHPALTLYGHELAQHWLQQLRTRVIQHNIRVLSAYYKKIRLSRAADLLSLDVSELENNISTLVSEGAL-YARIDRPANQVSFAPTKIAEETLSDWAADISELLRLVERTTHLINKEQMLHKV 445
            M  +L E+KD +A V A LPEAK LA+ GKLA+ +++++ +E+  R+GND  +LKEV+L   RL R+ +DW Q+N TLT ISKRR Q+  A++AMVQEA+G  +LD TPD +T+  L+V LRDITDGKI+VE ERA+LTR L+ + E +G VA A +++Q+VHVETYG+L K+EK +FILEQIRLTLAKKDF+R  I ++K+ +K+L  ED  +Q +K++FY+LMIEY +  EK  F++ Q +HSIY+TP VR +E  EW+  L A VLFL+++P+ N Q DML R+   E  +L +LP YK ++K +TT EII YP+     +ES P L   G EL   W + L+ R++QHNIR +++YYK+I   R ADLL LD ++ E  ++ +VS+G+L YA+IDRP   ++F   K +EE LS+W +DI +LL+LVER+ HLINKE MLHK+
Sbjct:    1 MGDRLEERKDFTAEVTAKLPEAKKLAEGGKLADGLDIIMSLERLCRVGNDFPNLKEVILTAARLCRQVEDWAQLNTTLTLISKRRGQHSKAVTAMVQEAVG--WLDETPDKDTRVLLLVALRDITDGKIYVEAERAKLTRMLAKIKEEDGDVAGAAEVLQEVHVETYGALTKKEKADFILEQIRLTLAKKDFVRALIQSRKINRKVLLDED--MQDIKVRFYKLMIEYDT-HEKATFDLCQDFHSIYDTPSVRDKEGEEWKQYLQAAVLFLVLSPNGNHQQDMLFRVA--EYKKLEELPAYKMLVKLFTTPEIIGYPVENQEALESDPCLAAGGPELLAKWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVADMVSDGSLAYAKIDRPKGIINFDKRKPSEEILSEWNSDIGQLLQLVERSCHLINKENMLHKI 440          
BLAST of EWM21148.1 vs. NCBI_GenBank
Match: gi|219110187|ref|XP_002176845.1| (regulatory proteasome non-atpase subunit 5 [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411380|gb|EEC51308.1| regulatory proteasome non-atpase subunit 5 [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 390.578 bits (1002), Expect = 2.913e-129
Identity = 205/447 (45.86%), Postives = 299/447 (66.89%), Query Frame = 0
Query:    3 GQLIEKKDCSAAVAAALPEAKSLADAGKLAEAVELLLGVEKQARMGNDVTSLKEVVLATIRLVREKKDWEQMNATLTQISKRRSQNKAAISAMVQEAM--------GPSYLDATPDVETKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEGKVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAKKVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEESEWRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQLPVYKEILKTYTTREIIQYPLPQLPDIESHPALTLYGHELAQHWLQQLRTRVIQHNIRVLSAYYKKIRLSRAADLLSLDVSELENNISTLVSEGALYARIDRPANQVSFAPTKIAEETLSDWAADISELLRLVERTTHLINKEQM 441
            GQL EK D S    A + +A++L +AG+L EA+ LL  +EKQ R+GND  SL  V   +++L R+  D + M  T+  +  RRSQ  +A+ A+VQ A+         P  +    ++  + +L+V LRD+TDGK+F+E ERA+LTR L+ + E +G ++EA +++QDVHVETYGSL K++K+EFILEQ+RLTLAKKDF+R  I+A KV+KK L  E+  ++  K++FY LM  YH   +K A ++A+ YH+IY TP + A+  +WR AL A V+FL ++P+ N+Q DML+R+  +E   L +LP  K+ +     +EII YP+    ++E+ P     G +LA HW +    R+IQHNIRV+S YYK+I  +R A LL L+ + +E  I+++VSEG++YA+IDRP + V F+  K AE  LSDWA+DI +LL LVE TTHLI+KE M
Sbjct:   13 GQLQEKLDLSKETDAKIEQARTLVNAGQLPEALALLSALEKQCRVGNDNPSLVRVCEESLKLCRQVGDEDAMVDTIQSLVTRRSQKTSAVKALVQTALPWCVEEPFAPLPVSTDSEIAFRDRLVVVLRDVTDGKLFLERERAQLTRALATIKEQQGDISEAANVLQDVHVETYGSLSKKDKIEFILEQMRLTLAKKDFVRAAIVAGKVSKKNLAEEN--MKTYKVQFYTLMTIYHR-HDKNALDLARDYHAIYLTPHILADGVKWREALQATVVFLALSPYDNEQQDMLNRIALEE--NLEKLPACKKTIDLLLKKEIINYPMTHQAELEALPVCHEGGEDLAAHWHEVFHRRIIQHNIRVVSVYYKRIHGARLAQLLQLEPARVEKEIASMVSEGSIYAKIDRPKDIVRFSQPKTAEAVLSDWASDIDKLLNLVETTTHLIDKENM 454          
BLAST of EWM21148.1 vs. NCBI_GenBank
Match: gi|1183375620|gb|ORY01231.1| (PCI-domain-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 382.874 bits (982), Expect = 1.293e-126
Identity = 202/441 (45.80%), Postives = 295/441 (66.89%), Query Frame = 0
Query:    9 KDCSAAVAAALPEAKSLADAGKLAEAVELLLGVEKQARMGNDVTSLKEVVLATIRLVREKKDWEQMNATLTQISKRRSQNKAAISAMVQEAMGPSYLDATPDVETKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEGKVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAKKVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEESEWRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQLPVYKEILKTYTTREIIQYPLPQLPDIESHPAL----TLYGHELAQHWLQQLRTRVIQHNIRVLSAYYKKIRLSRAADLLSLDVSELENNISTLVSEGALYARIDRPANQVSFAPTKIAEETLSDWAADISELLRLVERTTHLINKEQMLHKV 445
            KD S  V   LPEA+ LA +G+L +A+E LL +EKQ R   D+ S   ++   +++  E  DW+ +N  +  +SK+  Q K AI+ MVQEAM  SYLD TPD+ TK +LI TLR++T+GKI+VE E+ARLTR LS + E EG VAEA DI+Q++ VET+GS++K+EK +FILEQ+RL LAKKDFIRT +I++K++ K     +P    LKL++Y LMI+Y +L E E   I ++Y  IY+T  ++ +ES+W+  L   VLF++++P  N+QSD+++R+   E+  LA+LP+YKE+LK++ T E++++  P++ +I   PAL         E        L  RVI+HNIRV++ YY +I   R   LL L   E E  +S LV    +YARIDRPA  +SF+  K   + L+DW+ D++ LL L+E+TTHLINKE+M+HK+
Sbjct:    3 KDYSDVVDVQLPEAEQLAKSGELRKALEQLLSLEKQTRTAGDLASTTRILTGIVKICYESNDWKTLNEYVVLLSKKHGQLKQAITKMVQEAM--SYLDKTPDMPTKLELIDTLRNVTEGKIYVEIEKARLTRMLSKIKEDEGNVAEAADILQELQVETFGSMEKREKTDFILEQMRLCLAKKDFIRTQLISRKISTKFF--NEPEQADLKLRYYDLMIQY-ALHEGEYLNICKYYRQIYDTESIKKDESKWKEVLQNVVLFIVLSPFDNEQSDLINRIA--EDPNLAKLPLYKELLKSFITIELMRW--PRVEEIYG-PALKSTAVFSQKETGNDRWNDLHKRVIEHNIRVVAKYYTRITTKRLTQLLDLSDRETEEFLSKLVVSKTIYARIDRPAGIISFSAPKDPNQVLNDWSHDVNSLLGLIEKTTHLINKEEMVHKI 433          
BLAST of EWM21148.1 vs. NCBI_GenBank
Match: gi|673027514|ref|XP_008867718.1| (hypothetical protein H310_04940 [Aphanomyces invadans] >gi|574476491|gb|ETW03489.1| hypothetical protein H310_04940 [Aphanomyces invadans])

HSP 1 Score: 381.719 bits (979), Expect = 3.474e-126
Identity = 204/441 (46.26%), Postives = 297/441 (67.35%), Query Frame = 0
Query:    6 IEKKDCSAAVAAALPEAKSLADAGKLAEAVELLLGVEKQARMGNDVTSLKEVVLATIRLVREKKDWEQMNATLTQISKRRSQNKAAISAMVQEAMGPSYLDATPDVETKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEGKVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAKKVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEESEWRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQLPVYKEILKTYTTREIIQYPLPQLPDIESHPALTLYGHE-LAQHWLQQLRTRVIQHNIRVLSAYYKKIRLSRAADLLSLDVSELENNISTLVSEGALYARIDRPANQVSFAPTKIAEETLSDWAADISELLRLVERTTHLINKEQMLHKV 445
            ++K D SA  AA +P+A++ A +G LA A+E LL +EK +R+ ND+ SL  +V+  + L+   K +  +   +T + KRR+Q   AI  +V  A+  +++D  P  E + +LI  LR + DG+IF+E ERA+LT+ LS + E  G ++EA DI+Q+VHVETYG++ K EK EFILEQ+RLTLAKKD++R YI++KK+ +++LE ++   +A+K+KFY+LMIEY +  E    E+ +HY SI+NT  +  EE     AL   +LF II+PHSN Q DMLHRL R  E     LP +  ++K +TT+EII +PLP +P  +   + +++ H  L   WLQ + TR  +HNIRV+S +Y++IRL   A+++ L     E  IS+LVS G++YA+IDRPA  VSF   +  EE L++W++DISELLRLVE T HLINKE M+HKV
Sbjct:    5 LKKSDHSAETAALIPKARAQAASGDLAGAIEALLALEKLSRLHNDLASLTTLVVEVLTLLHTHKQFTLLIEHVTLLCKRRAQKSQAIGKIVTTAI--AFIDDAPTEELRVQLIQALRTVADGRIFLEKERAQLTQWLSQIKEKNGLISEAADILQEVHVETYGAMTKLEKAEFILEQVRLTLAKKDYVRAYILSKKILRRVLEEDN--FEAVKIKFYKLMIEYDT-HENNPLELCRHYQSIFNTKTLTVEEK--HDALKHAMLFAIISPHSNLQQDMLHRLAR--EPLRLDLPAFATLMKLFTTKEIIPFPLP-IPGWDLEKSSSIFQHTVLGAQWLQDVHTRTTEHNIRVVSEHYQRIRLPHLAEIIGLSEEMTETRISSLVSSGSVYAKIDRPAKIVSFHKMQSPEELLTNWSSDISELLRLVETTCHLINKENMVHKV 435          
BLAST of EWM21148.1 vs. NCBI_GenBank
Match: gi|566011643|gb|ETI34554.1| (hypothetical protein F443_18959 [Phytophthora parasitica P1569] >gi|568007339|gb|ETL81578.1| hypothetical protein L917_18108 [Phytophthora parasitica] >gi|568037193|gb|ETM34783.1| hypothetical protein L914_18194 [Phytophthora parasitica])

HSP 1 Score: 380.948 bits (977), Expect = 9.338e-126
Identity = 202/447 (45.19%), Postives = 298/447 (66.67%), Query Frame = 0
Query:    1 MDGQLIEKK-DCSAAVAAALPEAKSLADAGKLAEAVELLLGVEKQARMGNDVTSLKEVVLATIRLVREKKDWEQMNATLTQISKRRSQNKAAISAMVQEAMGPSYLDATPDVETKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEGKVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAKKVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEESEWRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQLPVYKEILKTYTTREIIQYPLPQLPDIESHPALTLYGH-ELAQHWLQQLRTRVIQHNIRVLSAYYKKIRLSRAADLLSLDVSELENNISTLVSEGALYARIDRPANQVSFAPTKIAEETLSDWAADISELLRLVERTTHLINKEQMLHKV 445
            M  + I KK D        LPEA+++A +G +  A E+LL +EKQAR+ NDV +LKE V + + L  + K WE +   +  ++KRR+Q   AI+ +VQ AM   +L  TP    K +LI  LR + +GKIF+E ERA LT+ LS + EA G++ EA  I+Q+VHVETYG++ K EK E+ILEQ+RLTLAKKD++R  I+AKK+ ++ LE ++   Q  KLKFY LMIEY +  E    E+ +H+ +I+NT +V+ +E  W+ AL    +F++++ +SN Q D+L  L R++  +  ++P +  +LK +TTREII +P+ Q   ++SHP   ++ H E    W + L TRV++HNIRV++ +Y +IRL   A+++ L     E++ISTLVS+G++YA+IDRPA  VSF      EE LS+W+ADIS+LLRLVE T HL+NKE M+HK+
Sbjct:    1 MSAEEIGKKADLGPEYQRVLPEAQAVASSGDVERACEILLALEKQARLANDVATLKEAVGSILTLCAQHKRWELLKDHVALLAKRRAQKSGAITVVVQRAM--EFLAETPSDAVKMELINALRTVAEGKIFLEKERATLTQMLSRMKEARGEIDEAATILQEVHVETYGAMTKLEKTEYILEQVRLTLAKKDYVRANILAKKILRRTLEEKN--FQECKLKFYHLMIEYDT-HENNTLELCRHWMAIFNTEIVKEKEEMWKKALEHATIFVVLSAYSNLQHDLLQNLAREKLTE--KVPDFAAVLKKFTTREIIGFPMEQDAVLKSHP---IFNHAERGAGWWKTLHTRVVEHNIRVVAEHYDRIRLPHLANMIGLSEDLTESSISTLVSDGSIYAKIDRPAKLVSFHRPLSPEEHLSNWSADISQLLRLVETTCHLVNKENMIHKI 437          
BLAST of EWM21148.1 vs. NCBI_GenBank
Match: gi|570969460|gb|ETP32579.1| (hypothetical protein F442_18740 [Phytophthora parasitica P10297])

HSP 1 Score: 380.178 bits (975), Expect = 1.661e-125
Identity = 202/447 (45.19%), Postives = 298/447 (66.67%), Query Frame = 0
Query:    1 MDGQLIEKK-DCSAAVAAALPEAKSLADAGKLAEAVELLLGVEKQARMGNDVTSLKEVVLATIRLVREKKDWEQMNATLTQISKRRSQNKAAISAMVQEAMGPSYLDATPDVETKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEGKVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAKKVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEESEWRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQLPVYKEILKTYTTREIIQYPLPQLPDIESHPALTLYGH-ELAQHWLQQLRTRVIQHNIRVLSAYYKKIRLSRAADLLSLDVSELENNISTLVSEGALYARIDRPANQVSFAPTKIAEETLSDWAADISELLRLVERTTHLINKEQMLHKV 445
            M  + I KK D        LPEA+++A +G +  A E+LL +EKQAR+ NDV +LKE V + + L  + K WE +   +  ++KRR+Q   AI+ +VQ AM   +L  TP    K +LI  LR + +GKIF+E ERA LT+ LS + EA G++ EA  I+Q+VHVETYG++ K EK E+ILEQ+RLTLAKKD++R  I+AKK+ ++ LE ++   Q  KLKFY LMIEY +  E    E+ +H+ +I+NT +V+ +E  W+ AL    +F++++ +SN Q D+L  L R++  +  ++P +  +LK +TTREII +P+ Q   ++SHP   ++ H E    W + L TRV++HNIRV++ +Y +IRL   A+++ L     E++ISTLVS+G++YA+IDRPA  VSF      EE LS+W+ADIS+LLRLVE T HL+NKE M+HK+
Sbjct:    1 MSAEEIGKKADLGPEYQRVLPEAQAVASSGDVERACEILLALEKQARLANDVATLKEAVGSILTLCAQHKRWELLKDHVALLAKRRAQKSGAITVVVQRAM--EFLAETPSDAVKMELINALRTVAEGKIFLEKERATLTQMLSRMKEARGEIDEAATILQEVHVETYGAMTKLEKTEYILEQVRLTLAKKDYVRANILAKKILRRTLEEKN--FQECKLKFYHLMIEYDT-HENNTLELCRHWMAIFNTEMVKEKEEMWKKALEHATIFVVLSAYSNLQHDLLQNLAREKLTE--KVPDFAAVLKKFTTREIIGFPMEQDAVLKSHP---IFNHAERGAGWWKTLHTRVVEHNIRVVAEHYDRIRLPHLANMIGLSEDLTESSISTLVSDGSIYAKIDRPAKLVSFHRPLSPEEHLSNWSADISQLLRLVETTCHLVNKENMIHKI 437          
BLAST of EWM21148.1 vs. NCBI_GenBank
Match: gi|675175855|ref|XP_008896812.1| (hypothetical protein PPTG_05082 [Phytophthora parasitica INRA-310] >gi|568102557|gb|ETN17228.1| hypothetical protein PPTG_05082 [Phytophthora parasitica INRA-310] >gi|970645225|gb|KUF85756.1| 26S proteasome non-ATPase regulatory subunit 12 [Phytophthora nicotianae] >gi|970653915|gb|KUF92309.1| 26S proteasome non-ATPase regulatory subunit 12 [Phytophthora nicotianae])

HSP 1 Score: 379.793 bits (974), Expect = 2.798e-125
Identity = 202/447 (45.19%), Postives = 298/447 (66.67%), Query Frame = 0
Query:    1 MDGQLIEKK-DCSAAVAAALPEAKSLADAGKLAEAVELLLGVEKQARMGNDVTSLKEVVLATIRLVREKKDWEQMNATLTQISKRRSQNKAAISAMVQEAMGPSYLDATPDVETKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEGKVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAKKVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEESEWRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQLPVYKEILKTYTTREIIQYPLPQLPDIESHPALTLYGH-ELAQHWLQQLRTRVIQHNIRVLSAYYKKIRLSRAADLLSLDVSELENNISTLVSEGALYARIDRPANQVSFAPTKIAEETLSDWAADISELLRLVERTTHLINKEQMLHKV 445
            M  + I KK D        LPEA+++A +G +  A E+LL +EKQAR+ NDV +LKE V + + L  + K WE +   +  ++KRR+Q   AI+ +VQ AM   +L  TP    K +LI  LR + +GKIF+E ERA LT+ LS + EA G++ EA  I+Q+VHVETYG++ K EK E+ILEQ+RLTLAKKD++R  I+AKK+ ++ LE ++   Q  KLKFY LMIEY +  E    E+ +H+ +I+NT +V+ +E  W+ AL    +F++++ +SN Q D+L  L R++  +  ++P +  +LK +TTREII +P+ Q   ++SHP   ++ H E    W + L TRV++HNIRV++ +Y +IRL   A+++ L     E++ISTLVS+G++YA+IDRPA  VSF      EE LS+W+ADIS+LLRLVE T HL+NKE M+HK+
Sbjct:    1 MSAEEIGKKADLGPEYQRVLPEAQAVAASGDVERACEILLALEKQARLANDVATLKEAVGSILTLCAQHKRWELLKDHVALLAKRRAQKSGAITVVVQRAM--EFLAETPSDAVKMELINALRTVAEGKIFLEKERATLTQMLSRMKEARGEIDEAATILQEVHVETYGAMTKLEKTEYILEQVRLTLAKKDYVRANILAKKILRRTLEEKN--FQECKLKFYHLMIEYDT-HENNTLELCRHWMAIFNTEMVKEKEEMWKKALEHATIFVVLSAYSNLQHDLLQNLAREKLTE--KVPDFAAVLKKFTTREIIGFPMEQDAVLKSHP---IFNHAERGAGWWKTLHTRVVEHNIRVVAEHYDRIRLPHLANMIGLSEDLTESSISTLVSDGSIYAKIDRPAKLVSFHRPLSPEEHLSNWSADISQLLRLVETTCHLVNKENMIHKI 437          
BLAST of EWM21148.1 vs. NCBI_GenBank
Match: gi|1214711172|gb|OWZ22202.1| (26S proteasome non-ATPase regulatory protein [Phytophthora megakarya])

HSP 1 Score: 379.022 bits (972), Expect = 4.463e-125
Identity = 205/448 (45.76%), Postives = 299/448 (66.74%), Query Frame = 0
Query:    1 MDGQLIEKK-DCSAAVAAALPEAKSLADAGKLAEAVELLLGVEKQARMGNDVTSLKEVVLATIRLVREKKDWEQMNATLTQISKRRSQNKAAISAMVQEAMGPSYLDATPDVETKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEGKVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAKKVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEESEWRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQ-LPVYKEILKTYTTREIIQYPLPQLPDIESHPALTLYGH-ELAQHWLQQLRTRVIQHNIRVLSAYYKKIRLSRAADLLSLDVSELENNISTLVSEGALYARIDRPANQVSFAPTKIAEETLSDWAADISELLRLVERTTHLINKEQMLHKV 445
            M  + I KK D        LP+A+++A +G +  A E+LL +EKQAR+ NDV +LKE V A + L    K WE +   +  ++KRR+Q   AI+ +VQ AM   +L  TP    K +LI  LR + +GKIF+E ERA LT+ LS + EA G++ EA  I+Q+VHVETYG++ K EK E+ILEQ+RLTLAKKD++R  I+AKK+ ++ LE ED   Q  KLKFY LMIEY +  E    E+ +H+ +I+NT +V+ +E  W+ AL    +F++++ +SN Q+D+LH+L     D+LA+ +P +  +LK +TT+EII +P+ Q   ++SHP   ++ H E    W + L TRV++HNIR+++ +Y +IRL   A ++ L     E++ISTLVS+G++YA+IDRPA  VSF      EE LS+W+ADIS+LLRLVE T HL+NKE M+HK+
Sbjct:    1 MSSEEIGKKADLGPEYQRVLPQAQAVAASGDVERACEMLLALEKQARLANDVATLKEAVGAILTLCALHKRWELLKDHVALLAKRRAQKSGAITVVVQRAM--EFLAETPSDAVKMELINALRTVAEGKIFLEKERATLTQMLSRMKEARGEIDEAATILQEVHVETYGAMTKLEKTEYILEQVRLTLAKKDYVRANILAKKILRRTLE-EDK-FQECKLKFYHLMIEYDT-HENNTLELCRHWMAIFNTDMVKEKEEMWKKALEHATIFVVLSAYSNLQNDLLHKLA---SDKLAEKVPDFAAVLKKFTTKEIIAFPMEQDAVLKSHP---IFNHAERGAEWWKTLHTRVVEHNIRIVAEHYDRIRLPHLAKMIGLSEDLTESSISTLVSDGSIYAKIDRPAKLVSFHRPLSPEEQLSNWSADISQLLRLVETTCHLVNKENMIHKI 437          
BLAST of EWM21148.1 vs. NCBI_GenBank
Match: gi|301119099|ref|XP_002907277.1| (26S proteasome non-ATPase regulatory subunit 12, putative [Phytophthora infestans T30-4] >gi|262105789|gb|EEY63841.1| 26S proteasome non-ATPase regulatory subunit 12, putative [Phytophthora infestans T30-4])

HSP 1 Score: 379.022 bits (972), Expect = 5.310e-125
Identity = 205/448 (45.76%), Postives = 298/448 (66.52%), Query Frame = 0
Query:    1 MDGQLIEKK-DCSAAVAAALPEAKSLADAGKLAEAVELLLGVEKQARMGNDVTSLKEVVLATIRLVREKKDWEQMNATLTQISKRRSQNKAAISAMVQEAMGPSYLDATPDVETKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEGKVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAKKVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEESEWRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQ-LPVYKEILKTYTTREIIQYPLPQLPDIESHPALTLYGH-ELAQHWLQQLRTRVIQHNIRVLSAYYKKIRLSRAADLLSLDVSELENNISTLVSEGALYARIDRPANQVSFAPTKIAEETLSDWAADISELLRLVERTTHLINKEQMLHKV 445
            M  + I KK D        LPEA+++A +G +  A E+LL +EKQAR+ NDV +LKE V + + L  + K WE +   +  ++KRR+Q   AI+ +VQ AM   +L  TP    K +LI  LR + +GKIF+E ERA LT+ LS + EA G++ EA  I+Q+VHVETYG++ K EK E+ILEQ+RLTLAKKD++R  I+AKK+ ++ LE ++   Q  KLKFY LMIEY +  E    E+ +H+ +I+NT +V+ +E  W+ AL    +F++++ +SN Q D+L  L R+   +LA+ LP +  +LK +TTREII +P+ Q   ++SHP   ++ H E    W + L TRV++HNIRV++ +Y +IRL   A ++ L     E++ISTLVS+G++YA+IDRPA  VSF      EE LS+W+ADIS+LLRLVE T HL+NKE M+HK+
Sbjct:    1 MSSEEIGKKADLGPEFQRVLPEAQAVAASGDVERACEILLTLEKQARLANDVATLKEAVGSILTLCAQHKRWELLKDHVALLAKRRAQKSGAITVLVQRAM--EFLAETPSDAVKMELINALRTVAEGKIFLEKERATLTQMLSRMKEARGEIDEAATILQEVHVETYGAMTKLEKTEYILEQVRLTLAKKDYVRANILAKKILRRTLEEKN--FQECKLKFYHLMIEYDT-HENNTLELCRHWMAIFNTEMVKEKEEIWKKALEHATIFVVLSAYSNLQHDLLQNLARE---KLAEKLPDFAAVLKKFTTREIIAFPMEQDAVLKSHP---IFNHVERGAEWWKSLHTRVVEHNIRVVAEHYDRIRLPHLAKMIGLAEDLTESSISTLVSDGSIYAKIDRPAKLVSFHRPLSPEEHLSNWSADISQLLRLVETTCHLVNKENMIHKI 437          
The following BLAST results are available for this feature:
BLAST of EWM21148.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101216|gb|EWM21148.1|0.000e+0100.0026s proteasome non-atpase regulatory subunit 12 [N... [more]
gi|299115380|emb|CBN74209.1|3.804e-15751.68conserved unknown protein [Ectocarpus siliculosus][more]
gi|219110187|ref|XP_002176845.1|2.913e-12945.86regulatory proteasome non-atpase subunit 5 [Phaeod... [more]
gi|1183375620|gb|ORY01231.1|1.293e-12645.80PCI-domain-containing protein [Basidiobolus merist... [more]
gi|673027514|ref|XP_008867718.1|3.474e-12646.26hypothetical protein H310_04940 [Aphanomyces invad... [more]
gi|566011643|gb|ETI34554.1|9.338e-12645.19hypothetical protein F443_18959 [Phytophthora para... [more]
gi|570969460|gb|ETP32579.1|1.661e-12545.19hypothetical protein F442_18740 [Phytophthora para... [more]
gi|675175855|ref|XP_008896812.1|2.798e-12545.19hypothetical protein PPTG_05082 [Phytophthora para... [more]
gi|1214711172|gb|OWZ22202.1|4.463e-12545.7626S proteasome non-ATPase regulatory protein [Phyt... [more]
gi|301119099|ref|XP_002907277.1|5.310e-12545.7626S proteasome non-ATPase regulatory subunit 12, p... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9558rna9558Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications