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Properties
| Property Name | Value |
|---|
| Product | cytosine deaminase |
| Orig transcript id | gnl|cribi|Naga_100108g12.7748.mrna |
| Orig protein id | gnl|cribi|Naga_100108g12.7748 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037254.1 | supercontig | KK037254.1:136029..137183 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9544 ID=rna9544|Name=rna9544|organism=Nannochloropsis gaditana|type=mRNA|length=2577bp
AACTTGCTTTATAAAAATGCGATAGCATGCCCTGCCAAGTAAATTGCTTT
CTTTATAGTTTTGTATCCCTCGTACCCCGTGCGGATCGTCGTTCCTTCGC
AAGTCGCGTGATCTCCTTCTGGACAAGAGCCGAGTAGCCTAGTCGCTCGG
GGTACTTGCCTCGTTAGCGACCTGCGGTCTATTTATACCATTTTTTTGGC
CACACGAATACTTTTAAAATATCTATCGAACGCATAAGAATAATTCTAAC
CGCTTTTTGATTCTCAAAGACCGACTTTGTCGATGTGCAGACGTCCGTGA
GGGACGAGGGGATTCGTGATTCCTGTTAGAAGGATCAAAAACATGCTGGG
CGGCAGTAATTTCTCCGACCGTAGTGCTAGTCCCCACAAGTCTCGTTAAC
CCCCACAACATCCCCGCAAAGTGTAATTATCGTTACCTTGACGTACTTTG
TAAATGAAATTGTGTACTGATTGAGCTACAACTTTGTAATGGGTGCTAGA
TACCATTTTCAACCTTCTATCCTGATGTAAACTGGATTGAGAAAAATGTG
CTGCCAAGCACCTCCGTCTTTACAACATTTAATTGCTATGTTTTTCTCTC
TTTATTTGCAACTTTTGTAATTGTCTATTCCTTTGAGTGTCAAGCGGACT
TTTTTCCTGATACGCTCGAAGCCTGACAAGTATGTCTTTGTTTTCTCTTC
CGATGCCCCTCGCCTGCCTTCTCACTTATCGCATGTCTTCGGTTGGGGAA
CTCAGGGTAGGGAAGAAACATGGACGACGTGAGGCGGGTGAGTCACCGGA
TTCACGACGCGGCTAAGAAAGGGCGGATCGACGATGTGGCCAAGCTCTTA
GCGGATTACCCACAACTTGTGAACGACAAGGGGGAGGACGGCTGGACTCC
TCTGTTTCGCGCCTGCTACAACAATCATCTGGAACTCGCCAAATATCTGG
CGGAAAATGGGGCGAATCTAGGGCGGGATGCGGACGATTTTCAAAATACC
GCCCTGCACGCTTGTTGCATTAACGGGCACAGGCAGGTGGCTGAGTTCCT
GCTCACCAAGGGCGTGGACGTGAATGACCACGACAACGTGGGGGGCTGGA
CCCCTTTGTATGCGGCCTCCTTTTTTGCCTGGCCCGAGCTGGTACGCTTG
CTTCTGGAGAAAGGGGCAGACCCCTCGATCGCCTGTAAAGAAGGGAAGAC
GGCTTTGCACGTGGTGTGTGAGGCGGGATACAGGGGGGAGCATCGGCCCA
CCATCATGGCGCTTTTGCAAAACTTGCCGGAGCCGACGGAGGCCAGGCCA
CGGGATGGTCGAGGCAGAGGACACCGAGGGGAGGGGGAGAGGGAAGGAGG
GAGGACAAGCCACCGGCATCACCAGCACTATCACCAGAGCCTGGAAGCCC
AAGCAAGGGGGCACTTGGCCTTAAAGAGCTCCTCGTCAGAGGGGGGCAAA
ATGGAGATAGGGGTGGCGGGGCCGCCGCCTTACACGGAGGATGGGTCGGG
GAAGCGGACGTACTTCCCTTGGGAGCTCGGGAGTGCGGACTATGCGTGGC
GGGCGGCGGGCTTGTGTCGAGGTATGCTGACGCGGGTCTTGGCGGAGGTG
GTGGAGACGGGGCGATTGGCCGCGTTGCCGGTGGAAGCGACGGTTCGGAA
GGGAAAGGAATTCGAAAAACCCTTTGTGGACGTGTTTGACCTGTTGGAGG
CAGCGATGCAGGTGGCGGAGACGCTGGAGACTTTTGTCCACGAAAAAAAA
GGGGAGGTGGGAGGCAGGAGGCCGGCAACAACGAAGGGGAATGACAAGGA
AAAGGCGGGTGGGGAGGTGGAAAGAGCTGCGGCCAACGGGGAGGATGACG
CGGACCTGTCGCTCTCACGGTGTAGTCTCGACTGTAATCAAGACGAGGGA
GCGACGATGCCTTTGGGGGAGAGGTTAAAGTTGCTGGGTATCGCTTTCTC
CATCCAACTAAACCCGGCCCATCACCCGCAGCGGGGGGAAACGGGCGCGC
TGCTGGCCTGTCTCTATACCGTGGCGACGCGCCTAAGCCAGGAGGACGTA
GCCGAGCGCGTGCACTCCTTGCTCGCCCAGTACCACTCCCACTCCGAGTC
CAAAAGCCTGCGGCTTCGGCTATTGCGCGTGAGCCAGATTCGAGGTCCCT
TGGAAGGGCATGAACGCGTGTCGAGGCGTGCAGCCTGCCCTGGGGAGGAC
ACTGATCCCCTGATTAGTACGGGTAAGGACGCTCAGAGAAGCGAGAGGAG
GAGAAGCGCGAGTTGCAGCAGCAGTGAGAGCAAGGACTCAGCCGGAGCGG
GGATGGTGGGAGGGTTGAGTGGTGGTTTTAGTCCGGTCGGAAGGGGAGGA
GACGGAGGGGAGAAAGGGGAGAGAATGCTAGCTAGGGCAGAAGAAAGGGA
GCGAAGCAAAAGAGAGTACCTGGAGCAGTTCAAATTCTTGAAAGAGCATG
CGCAGGATCTAATTTTGAGCGACGATTTATGAAGCTGATGAGATTTGATA
ATCGCATCACGATGTTTAAGAACAAAAGAAAACAAAGCGGAGAAAAAAAT
GAAATACAAAAAAATATAAAATTTTGA back to topprotein sequence of rna9544 >rna9544-protein ID=rna9544-protein|Name=rna9544|organism=Nannochloropsis gaditana|type=polypeptide|length=169bp
MATQKPQPATREKENEDDIYLQQALEEAKVGLNEGGIPIGAVLVHEGTDG
VRHVLGMGHNQRVQKKSPVLHGEMDCLENAGRCPASVYRKCTMYTTLSPC
SMCSGAILLFGIPRVVVGENQTFLGAEEHLRANGVEVIVVQDASCVAIMK
EFVREHKVLWEEDIGEPSE back to topmRNA from alignment at KK037254.1:136029..137183+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9544 ID=rna9544|Name=rna9544|organism=Nannochloropsis gaditana|type=mRNA|length=1155bp|location=Sequence derived from alignment at KK037254.1:136029..137183+ (Nannochloropsis gaditana)
ccctcacGGACGTCTGCACATCGACAAAGTCGGTCTTTGAGAATCAAAAA
GCGGTTAGAATTATTCTTATGCGTTCGATAGATATTTTAAAAGTATTCGT
GTGGCCAAAAAAATGGTATAAATAGACCGCAGGTCGCTAACGAGGCAAGT
ACCCCGAGCGACTAGGCTACTCGGCTCTTGTCCAGAAGGAGATCACGCGA
CTTGCGAAGGAACGACGATCCGCACGGGGTACGAGGGATACAAAACTATA
AAGAAAGCAATTTACTTGGCAGGGCATGCTATCGCATTTTTATAAAGCAA
GTTTTTGCGGGCAGCAGGCACAAAGTGCCTTGAAGTTCAccaccaacctc
cccctcaagCCCGCGCGTTCGACTATACGACCGATAAACTTATTCTGAGG
TACATACACAGCATGCGGCCCGCACCAGACCTTGGCAATAAGAGTGAACA
TAAGGTTCATCACGATTATTCCGTTTCACTCGTGAAGAATTCGTGCCGCC
TTCACTTGTCATCTTCCTaaacctccctctcttttcagCACAGGATGGCG
ACTCAGAAACCACAACCAGCAAcgagagaaaaagaaaacgaAGATGACAT
TTACCTACAGCAAGCTTTAGAGGAGGCAAAAGTAGGTTTGAATGAAGGCG
GGATCCCCATTGgagccgtcctcgtccatgaaGGAACAGACGGGGTTCGT
CATGTACTGGGGATGGGCCACAACCAAAGGGTGCAGAAGAAGTCTCCGGT
CCTTCACGGGGAAATGGACTGCCTTGAAAATGCTGGCCGATGCCCAGCGT
CTGTGTACCGGAAATGCACCATGTACACAACCTTATCTCCTTGCTCCATG
TGCAGCGGGGCGATACTCTTGTTTGGGATTCCTCGTGTCGTTGTGGGAGA
GAATCAGACATTTCTGGGCGCAGAGGAGCATTTAAGGGCGAATGGAGTTG
AGGTCATTGTGGTACAGGATGCATCGTGCGTGGCTATCATGAAGGAGTTC
GTGCGAGAGCACAAAGtgttgtgggaggaggatatTGGTGAGCCCTCAGA
GTGAGGCCAAGCGGCTGGGTGTCTAGAAAAGTTGCTTGGCGAAGGAGAGT
GGAGGAGTGTAAGGAGATAATTACCGCTTTATTAAAACACTTTGCTTTGT
GATGT back to topCoding sequence (CDS) from alignment at KK037254.1:136029..137183+ >rna9544 ID=rna9544|Name=rna9544|organism=Nannochloropsis gaditana|type=CDS|length=510bp|location=Sequence derived from alignment at KK037254.1:136029..137183+ (Nannochloropsis gaditana)
ATGGCGACTCAGAAACCACAACCAGCAAcgagagaaaaagaaaacgaAGA
TGACATTTACCTACAGCAAGCTTTAGAGGAGGCAAAAGTAGGTTTGAATG
AAGGCGGGATCCCCATTGgagccgtcctcgtccatgaaGGAACAGACGGG
GTTCGTCATGTACTGGGGATGGGCCACAACCAAAGGGTGCAGAAGAAGTC
TCCGGTCCTTCACGGGGAAATGGACTGCCTTGAAAATGCTGGCCGATGCC
CAGCGTCTGTGTACCGGAAATGCACCATGTACACAACCTTATCTCCTTGC
TCCATGTGCAGCGGGGCGATACTCTTGTTTGGGATTCCTCGTGTCGTTGT
GGGAGAGAATCAGACATTTCTGGGCGCAGAGGAGCATTTAAGGGCGAATG
GAGTTGAGGTCATTGTGGTACAGGATGCATCGTGCGTGGCTATCATGAAG
GAGTTCGTGCGAGAGCACAAAGtgttgtgggaggaggatatTGGTGAGCC
CTCAGAGTGA back to top
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