EWM21163.1, cds9513 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21163.1 vs. NCBI_GenBank
Match: gi|585101233|gb|EWM21163.1| (cytosine deaminase [Nannochloropsis gaditana]) HSP 1 Score: 349.747 bits (896), Expect = 4.317e-122 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 Query: 1 MATQKPQPATREKENEDDIYLQQALEEAKVGLNEGGIPIGAVLVHEGTDGVRHVLGMGHNQRVQKKSPVLHGEMDCLENAGRCPASVYRKCTMYTTLSPCSMCSGAILLFGIPRVVVGENQTFLGAEEHLRANGVEVIVVQDASCVAIMKEFVREHKVLWEEDIGEPSE 169 MATQKPQPATREKENEDDIYLQQALEEAKVGLNEGGIPIGAVLVHEGTDGVRHVLGMGHNQRVQKKSPVLHGEMDCLENAGRCPASVYRKCTMYTTLSPCSMCSGAILLFGIPRVVVGENQTFLGAEEHLRANGVEVIVVQDASCVAIMKEFVREHKVLWEEDIGEPSE Sbjct: 1 MATQKPQPATREKENEDDIYLQQALEEAKVGLNEGGIPIGAVLVHEGTDGVRHVLGMGHNQRVQKKSPVLHGEMDCLENAGRCPASVYRKCTMYTTLSPCSMCSGAILLFGIPRVVVGENQTFLGAEEHLRANGVEVIVVQDASCVAIMKEFVREHKVLWEEDIGEPSE 169
BLAST of EWM21163.1 vs. NCBI_GenBank
Match: gi|1207201469|ref|WP_087937687.1| (tRNA-specific adenosine deaminase [Algoriphagus faecimaris] >gi|1086808072|emb|SDC51609.1| cytosine deaminase [Algoriphagus faecimaris]) HSP 1 Score: 207.994 bits (528), Expect = 2.555e-66 Identity = 97/150 (64.67%), Postives = 123/150 (82.00%), Query Frame = 0 Query: 18 DIYLQQALEEAKVGLNEGGIPIGAVLVHEGTDGVRHVLGMGHNQRVQKKSPVLHGEMDCLENAGRCPASVYRKCTMYTTLSPCSMCSGAILLFGIPRVVVGENQTFLGAEEHLRANGVEVIVVQDASCVAIMKEFVREHKVLWEEDIGEP 167 D YL+ A+ EAK GL+EGGIPIG+VLVH+G +LG GHN+RVQ+KS LHGEMD LENAGR PASVY++ +YTTLSPC MC+GAILL+GIP+VV+GEN+TF+G+E+ LR NGVEV+VV D +CV +M+EF+ ++ LW EDIGEP Sbjct: 2 DQYLEAAINEAKTGLHEGGIPIGSVLVHQG-----KILGKGHNKRVQQKSVTLHGEMDALENAGRQPASVYQESVLYTTLSPCPMCTGAILLYGIPKVVIGENRTFMGSEKLLRENGVEVVVVDDPTCVKMMEEFISKNPSLWNEDIGEP 146
BLAST of EWM21163.1 vs. NCBI_GenBank
Match: gi|501521973|ref|WP_012529910.1| (tRNA-specific adenosine deaminase [Geobacter bemidjiensis] >gi|197087227|gb|ACH38498.1| zinc-dependent cytosine deaminase [Geobacter bemidjiensis Bem]) HSP 1 Score: 206.838 bits (525), Expect = 6.342e-66 Identity = 98/148 (66.22%), Postives = 118/148 (79.73%), Query Frame = 0 Query: 18 DIYLQQALEEAKVGLNEGGIPIGAVLVHEGTDGVRHVLGMGHNQRVQKKSPVLHGEMDCLENAGRCPASVYRKCTMYTTLSPCSMCSGAILLFGIPRVVVGENQTFLGAEEHLRANGVEVIVVQDASCVAIMKEFVREHKVLWEEDIG 165 DIY+Q A+EEAK GL EGGIPIG+VLVH+G +LG GHN+RVQK S +LHGEMD LENAGR PA VYR+ +YTTLSPCSMCSGAILL+GIPRVV+GEN TF G EE LR++GV+V V+QD C+++M+ F+ E LW EDIG Sbjct: 2 DIYMQSAIEEAKKGLGEGGIPIGSVLVHKGL-----ILGRGHNRRVQKGSSILHGEMDALENAGRLPAQVYRESVLYTTLSPCSMCSGAILLYGIPRVVIGENSTFTGEEELLRSHGVQVDVLQDQECISLMRTFIEEKPELWNEDIG 144
BLAST of EWM21163.1 vs. NCBI_GenBank
Match: gi|1086140039|emb|SDB29410.1| (cytosine deaminase [Idiomarina indica]) HSP 1 Score: 205.682 bits (522), Expect = 1.959e-65 Identity = 94/149 (63.09%), Postives = 123/149 (82.55%), Query Frame = 0 Query: 18 DIYLQQALEEAKVGLNEGGIPIGAVLVHEGTDGVRHVLGMGHNQRVQKKSPVLHGEMDCLENAGRCPASVYRKCTMYTTLSPCSMCSGAILLFGIPRVVVGENQTFLGAEEHLRANGVEVIVVQDASCVAIMKEFVREHKVLWEEDIGE 166 D ++Q A+ EA++GL EGG+PIG+VLVH+G ++G GHN+R+Q+ SP+LHGEMD L+NAGR PA VYR+CT+YTTLSPC MCSGAI L+GIPRVVVGENQTF+GAEE LR GV+V+V+QD +C+ +M+ F+++H LW EDIGE Sbjct: 2 DEFMQAAIAEAELGLQEGGVPIGSVLVHQGK-----IIGRGHNRRMQQGSPILHGEMDALQNAGRQPAHVYRECTIYTTLSPCCMCSGAIELYGIPRVVVGENQTFMGAEERLRKAGVDVVVLQDETCIRLMETFIQQHPELWNEDIGE 145
BLAST of EWM21163.1 vs. NCBI_GenBank
Match: gi|1209283215|ref|WP_088330072.1| (tRNA-specific adenosine deaminase [Lacimicrobium sp. SS2-24]) HSP 1 Score: 205.682 bits (522), Expect = 2.439e-65 Identity = 96/149 (64.43%), Postives = 124/149 (83.22%), Query Frame = 0 Query: 18 DIYLQQALEEAKVGLNEGGIPIGAVLVHEGTDGVRHVLGMGHNQRVQKKSPVLHGEMDCLENAGRCPASVYRKCTMYTTLSPCSMCSGAILLFGIPRVVVGENQTFLGAEEHLRANGVEVIVVQDASCVAIMKEFVREHKVLWEEDIGE 166 D++L+ A+E+A++GL EGGIPIG+VLVHEG +LG GHN+RVQ+ S +LHGEMD LE AGR PASVYR+ T+YTTLSPCSMCSGAILL+GIP+VV+GENQTFLG E L++ GV++ VVQD +C+A+M+EF++ + LW EDIGE Sbjct: 2 DVFLEAAIEQARLGLAEGGIPIGSVLVHEGK-----ILGAGHNRRVQQGSAILHGEMDALEQAGRHPASVYRESTLYTTLSPCSMCSGAILLYGIPKVVIGENQTFLGEEALLQSRGVQLEVVQDKTCIALMEEFIQRNPELWFEDIGE 145
BLAST of EWM21163.1 vs. NCBI_GenBank
Match: gi|1011634279|ref|WP_062484357.1| (tRNA-specific adenosine deaminase [Lacimicrobium alkaliphilum] >gi|962034216|gb|ALT00531.1| cytidine deaminase [Lacimicrobium alkaliphilum]) HSP 1 Score: 204.527 bits (519), Expect = 5.366e-65 Identity = 94/149 (63.09%), Postives = 125/149 (83.89%), Query Frame = 0 Query: 18 DIYLQQALEEAKVGLNEGGIPIGAVLVHEGTDGVRHVLGMGHNQRVQKKSPVLHGEMDCLENAGRCPASVYRKCTMYTTLSPCSMCSGAILLFGIPRVVVGENQTFLGAEEHLRANGVEVIVVQDASCVAIMKEFVREHKVLWEEDIGE 166 D++L+ A+E+A++GL EGGIPIG+VLVH+G +LG GHN+RVQ+ S +LHGEMD LE AGR PASVYR+ T+YTTLSPCSMC+GAILL+GIP+VV+GENQTF+G EE L++ GV++ VVQD +C+A+M+EF++ + LW EDIGE Sbjct: 2 DVFLEAAIEQARLGLAEGGIPIGSVLVHDGK-----ILGAGHNRRVQQGSAILHGEMDALEQAGRHPASVYRESTLYTTLSPCSMCTGAILLYGIPKVVIGENQTFMGEEELLQSRGVKLQVVQDKTCIALMEEFIQRNPDLWFEDIGE 145
BLAST of EWM21163.1 vs. NCBI_GenBank
Match: gi|1057006522|ref|WP_068418038.1| (tRNA-specific adenosine deaminase [Roseivirga echinicomitans] >gi|1005889405|gb|KYG73060.1| cytidine deaminase [Roseivirga echinicomitans]) HSP 1 Score: 204.527 bits (519), Expect = 5.921e-65 Identity = 93/150 (62.00%), Postives = 119/150 (79.33%), Query Frame = 0 Query: 18 DIYLQQALEEAKVGLNEGGIPIGAVLVHEGTDGVRHVLGMGHNQRVQKKSPVLHGEMDCLENAGRCPASVYRKCTMYTTLSPCSMCSGAILLFGIPRVVVGENQTFLGAEEHLRANGVEVIVVQDASCVAIMKEFVREHKVLWEEDIGEP 167 D YL +A+ +AK+GL EGGIPIG+VLVH G ++G GHN+RVQ+KS VLHGEMD LENAGR PASVYR +YTTLSPC MC+GAILL+GIP+VV+GENQTF+G+E+ L NGVEV++ +A C+ +M++F+ + LW EDIGEP Sbjct: 2 DKYLNEAINQAKIGLEEGGIPIGSVLVHNG-----QIIGKGHNKRVQQKSVVLHGEMDALENAGRQPASVYRASVLYTTLSPCPMCTGAILLYGIPKVVIGENQTFMGSEKLLEENGVEVVIENNAQCIKMMQDFIETNPTLWNEDIGEP 146
BLAST of EWM21163.1 vs. NCBI_GenBank
Match: gi|891197725|ref|WP_048919556.1| (tRNA-specific adenosine deaminase [Rufibacter sp. DG31D] >gi|887499054|gb|AKQ44763.1| cytidine deaminase [Rufibacter sp. DG31D]) HSP 1 Score: 204.527 bits (519), Expect = 6.254e-65 Identity = 96/148 (64.86%), Postives = 119/148 (80.41%), Query Frame = 0 Query: 18 DIYLQQALEEAKVGLNEGGIPIGAVLVHEGTDGVRHVLGMGHNQRVQKKSPVLHGEMDCLENAGRCPASVYRKCTMYTTLSPCSMCSGAILLFGIPRVVVGENQTFLGAEEHLRANGVEVIVVQDASCVAIMKEFVREHKVLWEEDIG 165 D ++Q AL+EAK G EGGIPIG+VLVH+G ++G GHN+RVQ+ S +LHGEMD LENAGR PASVYR+CT+YTTLSPCSMCSG ILL+GIP+VVVGEN+TFLG EE LR+ GV+V VV D C ++M++F++E LW EDIG Sbjct: 3 DQFMQAALDEAKKGYAEGGIPIGSVLVHQG-----KIIGRGHNKRVQEGSAILHGEMDALENAGRQPASVYRECTIYTTLSPCSMCSGTILLYGIPKVVVGENKTFLGEEELLRSRGVDVTVVDDPECYSLMQQFIQEKPALWNEDIG 145
BLAST of EWM21163.1 vs. NCBI_GenBank
Match: gi|1120223838|ref|WP_073091138.1| (tRNA-specific adenosine deaminase [Cyclobacterium lianum] >gi|1110440143|emb|SHM43522.1| cytosine deaminase [Cyclobacterium lianum]) HSP 1 Score: 204.142 bits (518), Expect = 9.277e-65 Identity = 93/149 (62.42%), Postives = 121/149 (81.21%), Query Frame = 0 Query: 18 DIYLQQALEEAKVGLNEGGIPIGAVLVHEGTDGVRHVLGMGHNQRVQKKSPVLHGEMDCLENAGRCPASVYRKCTMYTTLSPCSMCSGAILLFGIPRVVVGENQTFLGAEEHLRANGVEVIVVQDASCVAIMKEFVREHKVLWEEDIGE 166 D ++Q A+EEA+ G++ GGIPIG+VLV+E ++G GHNQRVQK S +LHGEMD LENAGR PA+VY+KC +YTTLSPC MCSGAILL+GIP+VV+GEN T++GAE LR NGVE+ +VQD+ C A+M+ F++E+ LW+EDIGE Sbjct: 2 DQFMQAAIEEAQSGMHSGGIPIGSVLVYE-----NEIIGRGHNQRVQKGSTILHGEMDALENAGRQPAAVYKKCVLYTTLSPCPMCSGAILLYGIPKVVIGENLTYMGAETLLRENGVELTIVQDSRCQALMRRFIQENPALWQEDIGE 145
BLAST of EWM21163.1 vs. NCBI_GenBank
Match: gi|670485878|ref|WP_031434130.1| (tRNA-specific adenosine deaminase [Methylomarinum vadi]) HSP 1 Score: 203.371 bits (516), Expect = 1.932e-64 Identity = 96/148 (64.86%), Postives = 119/148 (80.41%), Query Frame = 0 Query: 18 DIYLQQALEEAKVGLNEGGIPIGAVLVHEGTDGVRHVLGMGHNQRVQKKSPVLHGEMDCLENAGRCPASVYRKCTMYTTLSPCSMCSGAILLFGIPRVVVGENQTFLGAEEHLRANGVEVIVVQDASCVAIMKEFVREHKVLWEEDIG 165 D +++ A+EEA+ GL EGGIPIG+VLVH+G ++G GHN+RVQK S VLHGEMD LENAGR PASVYR+CT+YTTLSPCSMC+GAILL+GIP+VV+GENQTF G E+ LR+NGV V V+Q+ SC+ +MK F+ LW EDIG Sbjct: 3 DQFMKAAIEEAETGLREGGIPIGSVLVHQG-----KIIGRGHNRRVQKGSVVLHGEMDALENAGRQPASVYRECTLYTTLSPCSMCTGAILLYGIPKVVIGENQTFKGEEDLLRSNGVAVEVLQEPSCIDLMKRFIEASSELWNEDIG 145 The following BLAST results are available for this feature:
BLAST of EWM21163.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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