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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_102486g1.7184.mrna |
| Orig protein id | gnl|cribi|Naga_102486g1.7184 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:820175..820954 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna953 ID=rna953|Name=rna953|organism=Nannochloropsis gaditana|type=mRNA|length=4692bp
ATGGCGAAAGAGAAGGGTGGACAGATATTTTCGACGTGGATCGGAGACAA
AAACGAAACGATCGACTTTTCGTACGAATACATATGGGATCGTTCTGGCG
CCATCGCCTATTACTTAAATACAAAATATGGAATCAAAAAGGGAGAGCGT
GTAATTCTCTGCTACGGATTTGGCCTGGAATTCTTCGTGGCTTTTTTAGC
CTGCCTGCGATTGGGCGTAGTGGCCGTGCCAGTTTATCCCCCAAATCCTA
CGAAACTCAAAATGTCTCTTGAAAAGCTTGAGCTGATTGTAACCAGTGCA
GGGGCCACCCTCTGTCTTACAGACAACACCATAAATTGGTTTCGAAAAGC
CTCTCAGCTAAACGTACTTTCTTCGGCAAAATGGCCGAAAGGATTGAAGT
GGGACTCTACAGATTCCATCCTGGCTGGTACGGGTACATCTTGCGACGAG
CCCGGTTTGCATCCTAACGATATTGCCTTCTTACAGTATACAAGTGGATC
TACTGGTGATCCCAAGGGTGTCATGATCACCTTTGGAAACTTGGATCACA
ACGTAAATGATCTCATTCTATTTTCGCTGCGCCGGGATATTTTTTGTAAT
CGCACGCGTACGTTGGAAAACATTGAGGTGCCTGTGGGGGTGAGCTGGCT
GCCCCAGTATCATGACATGGGATTGATCGTGGGATTAATTATGCCGTTTG
TAGGAGGCTTTCGTATGTATCACATGTCGCCCATGACATTTGTTAAAAAT
CCGCTTATTTGGATTAAGACAATCTCCAATGTTGGTGCTCATTTCAGCAC
AGCCCCGAACTTTGCCTTGGGCCTTACAGCACGGCGGTGGAAAAGCCAGC
GAAAAAAGGAAGCATTAGATTTAGGCACCCTTCAATTTATTCAATTGGGG
GGAGAGCCCGTAAGTGCGGAACATATAGCATCGTTTTCTTCCACGTTTGC
CGGATACGGTTTACGACGCGATTGGGTAGGACCTGCCTATGGCCTTGCGG
AGCATACTGTAGCGGTGTCGTACTGTACTGAGCTAGTAATGTGCAGTGAA
ATTGCGGGAGGTACCTTGGTGGCATGTGGCGCAGACTTTCGGGTAGACGT
GCGGATCGTCGACCCGGAGTCGTTCGCCGAATGTCAAGAACGAGAGCAAG
GGGAAATTTGGTTGTCAAGCCCCTCTTGTGCCGTGGGGTATTGGGGCAGG
GAAGATGCAACACAAGAAACGTTTAAAGCACGTATGTCTACACCAGACCG
TCCTCCGATATTTGGGAACGGTGTCTATATGCGAACAGGTGACATGGGGT
TTCTCGATAAAGATCACCTTTTTATATGCGGGCGCATCAAAGACCTCATC
ATCCTGAGAGGGAAGAATTACTACCCACAAGATATCGAAATGGTTGTTGA
GAAGGCGTCTGACCATGTGCGGCCAGGCTGCTTGGCCGCTTTTAGCTCGT
CAGTTGCGGACTTGGAGGAAGAGCAGGTCGAAATCGTGTTTGAATGGCGA
GAAGTTAAGGGCGCCACAAGCTCGAAAAACATGATGCATGAGGAATTAGA
CAAGATTTTTCGTGCAATTGTGAGCGAATGCGGCATCCGCGTCTACAGGA
TTGTCGCGATTCAGGACAGATCTATCCCAAAGACGACCTCCGGAAAGATT
CGACGCCGTGCAACCCGAGATGCGTTGCATCAGAACGAATTGCGAGTAGT
ATTTGAATTGGCACTTGGGACTCATGAGAGTGACAGGGACCTTCTGAAGC
TTGATTGTACTGGACAAGAGGCACTGAGTATAATCGAAGACGCAGTTTCA
CCTGGACTGACATTGGGCGGAAATTCCGTTCCTTCGCAGCACGATGGAAC
TTCGTCACATGCCACGAGCCCGGAAGAGCAGCTTCGGGCGCAGCTGTTGC
AAAACATACAGGAGAAGTTACTGCGTGTGATTTTGGAGACAGCGCTAGAT
GTTACAGGTCTGGATCATGTGGAAGTTGATTTTCCCTTGATGGATCTTGG
CCTCGAGTCTATTCTGGCAATAGAGTTTCGTGAGAAGTTGTCAGCGAAAT
TAGGCGGCTTTGACCTTCCAGACACCATCATTTTTGACTACCCGACAATT
CGTCAGATAGCTGAGTACATTATCAAAGAAATCTTCGGCAGTGGTTATGG
AATCTATGGATCAGGTGGAACGTTGTCGGGACCTGATTTGAGTGATAGGA
TAGTTCATCACGTAGAAAATGAGCCATTAGCTGTTGTAGGCATAGCTTGT
CGTACACCAGGAGGAATAGACGGCACGCACGCATTCTGGCGTATGCTCCT
CGATGGTACTGATACCGTAACAGAAATTCCTAAGGAACGTTGGGACGTGG
ATGCGTATTACCATCCGAATCCTGAACATCTTGGCACAATGTACACACGT
GCAGGTGCATTTCTGGATGATATCGAAAGCTTTGATGCCGAGTTTTTCGG
CATTTCGGAGCCTGAGGCGCTATCAATGGACCCACAACAAAGGATTCTTC
TGGAAACATCGTATTGCGCGCTCCATAATGCCGGATACTCTCAGGAATCC
CTTCTCGGGAAGGATATTGGCGTCTTTGTTGGTGTCTGTAGCACAGATTT
CAGCCGCATTAAGCAGTCACAAGTGGGGCCTTATACGGCAACGGGTGCGT
CACAATGTATCATTCCGAATCGTGTATCTTTTGCACTTGGTTTGAAAGGC
CCCAGCATGAGTATCGATACCGCTTGTTCGTCCTCTTCTGTAGCTGTGCA
TTTGGCGGCAAGATCGATTCAGAGCGGGCAGTCCTCGGTCGCCCTTGCCG
CGGGCGTCAACCTCATCTTATTGCCAGATACGTACATAGCCGTATGCCAA
GGGCGAATGCTTGCAATTGATGGCCGCTGCAAAACGTTTGATGCCGCTGC
GAACGGATATGTCCGAGGCGAGGGCTGTGGGGTTGTTGTTTTGAAGCGTT
TGGCGGACGCGAAACGCGACAGAGATTCCATTTTATCTTTGCTATTGGGC
AGCGCGGTGAATCAAGACGGCCGTAGCGCTAGTCTTACGGCGCCAAATGG
TCCTTCACAACAAGAAGTTATCCGTCGCGCACTGAGCGAGGCAAATTTAA
CTCCCTCGACCGTTGATTACATCGAAGCTCACGGTACAGGGACAGCGTTG
GGCGATCCAATTGAAGTCGGTGCACTCAAAGCTGTATTTGGACCCGATCG
ACCACATAATCATCCCCTCTATATAGGCTCGATCAAGACCAACATAGGTC
ACCTGGAAGGATCAGCTGGCATAGTGGGATTCATCAAGGCAGTTATGGTA
GTTCAACATCGTTTGGTACCTCGTAACCTTCATTTTAAGGCTTTGAATCC
AAGCATAACTCTGGGCTCATGTCCTTTTATTTTTCCAACGGAAAATGTCG
ATTTGTGTAAATTGCATGGGGAATCAGCAGTTGCCGGCGTGAATTCTTTT
GGATTTGGGGGCACAAACACTCACTTGGTTGTGAGGGGCTTGGATCCCAC
GGAAGATTCAGCGGATGCAAATGCCTTGATAACAGATTTCCCGACGGACC
GCGAAAGAGATCTGATAGCCTTTTTATTTACGGGCCAAGGTTCTCAGTAT
GTAGGCATGGGCAAAACGTTGTACGAATCAGAGCTTTCCTTTCGGAGAGT
CATCGATCAATGCGACAGTTACCTGAAAAATATTTGGCCTTTTTCACTTG
TTGAGCTCTTGTACGAAGGGAAGTCCGATATCATGAAAAAGAAGCTTCAA
GACACGTGCTACGCGCAACCTGCACTTTTTGCGGTTGAGATGGCTTTGGC
CGACCTCTGGAAAGAGTATGGGATTATTCCCGATGTCGTAATGGGCCACA
GTGCCGGAGAACTAGCCGCTGCGTGTGTTGCGGGCGTCTTTTCCTTGACA
GATGGCTTGCGGCTTGTAACTGAGCGAGGGGCGCTGATGCACTCAGTACC
CAGAAATGATGGGTCAATGTTTGCATTACGAGCAACGGAAATAGACGTAC
GAGACGCTATAACACAGGAAGTGCTTCATAGTGCGGAGAAGGAGAGTTGG
CGCAATTTGGAAGTTGCTGCAGTCAACGGCCCACGAAGTGTCGTTATTTC
AGGACCCAAAAAAATGGGAGAAGCTTTAATTAAGCGCATGAATGTTCAGG
CGACTGAGTTGGACGTCTCGCACGCTTTCCATTCGAAGATGATGGAGAAT
GCGACATCAGCCTTGAAGTCTCTAGCAGACAGCATCAACTTTTCATCACC
AAGAATCCCCATTGTCTCGAACGTGACCGGTAAGTATGCAAGCGACGGAG
ATCTGACTACTGGGGAGTACTGGGTACGTCACATGTTGCAGAGCGTCAAA
TTTTGGGACGGTATGCGCTCTTTACAAGATGCAAAGGTCAAAACCTTTAT
TGAAATTGGCCCAGAGCCACTTCTTACGGGCATGGGACGTCAGTGTGTCG
ATGATGCTAGAGAACGCCTATGGTTGCACTCTCTAGAGAAGAGCGGGGCG
AGCGCTGTGATCGAACGCAGTCTTCGTAAATTGGGGATCACTGTTCCTGC
TGCTGTTAAGAACAGTGGAGTTACCAACGAAGGGACTTGTAGAAATTTAT
TTGCAAGGAGACAAAGATTCAAATGGAGGAGCACAAGACGTTGTCGCAAT
CCTGCTTGTCGCCATGGACTGGCCAAAGTAGACGAGAGATAA back to topprotein sequence of rna953 >rna953-protein ID=rna953-protein|Name=rna953|organism=Nannochloropsis gaditana|type=polypeptide|length=226bp
MSFPWSIRSENSSDEIVFEVIWEEVATSPGSKSDATLFLGVTEGSREQLL
RISSEMASVTLVEQCSCEHLEAMDCTRETVREYRADLTNAVHMAELTSLE
SWTAVVLLPSDKSMMIRQSLALVKGALSPSAGKRSVSSLWFVSAGALPVG
EESVKDEASARQSWLSGFVKTVGIEHAELGVRHVDVRSDDDGVIDDISHL
LGGAMSLPEKEMERARSRSLLRSTLG back to topmRNA from alignment at CM002456.1:820175..820954+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna953 ID=rna953|Name=rna953|organism=Nannochloropsis gaditana|type=mRNA|length=780bp|location=Sequence derived from alignment at CM002456.1:820175..820954+ (Nannochloropsis gaditana)
ATGGTTTGAGGCAGGTCGACGTGGTGTCAGAGCGACCGGCGGCGCTGTTT
AACCGTCAGTCGTTCCCTTGGTCAATCCGTTCCGAGAATTCGTCCGATGA
GATAGTGTTCGAGGTGatttgggaggaggtggcgaccTCTCCTGGTAGTA
AGTCTGACGCGACGCTGTTTCTGGGCGTGACGGAAGGTTCGCGGGAGCAG
CTACTCAGAATAAGCTCGGAGATGGCATCGGTGACATTGGTGGAGCAGTG
TTCTTGTGAGCATCTGGAAGCCATGGACTGCACACGCGAGACTGTGCGGG
AGTATCGTGCGGACCTGACCAATGCTGTGCACATGGCGGAGCTGACCAGC
TTGGAGTCGTGGACAGCAGTCGTATTGTTACCAAGCGACAAGAGCATGAT
GATCCGACAAAGTTTGGCTTTGGTGAAGGGGGCATTGTCGCCGAGCGCAG
GCAAGAGAAGCGTGTCATCGCTCTGGTTTGTGAGTGCAGGGGCATTGCCG
GTAGGCGAGGAAAGCGTAAAGGATGAGGCAAGCGCACGGCAATCGTGGTT
GTCAGGTTTCGTGAAGACAGTAGGGATTGAGCACGCAGAGCTGGGTGTGC
GGCATGTGGATGTACGATCCGATGACGACGGGGTGATTGACGATATAAGC
CATTTGCTGGGCGGTGCTATGTCATtgccggagaaggagatggaagtGGC
TTTGCGCGGGAGTCGAGTTTACGTTCCTCGTTTGGTAGCGAGCAAGGAGC
AGATCTCTGCTTCGGAGCACTTTGGGGTAG back to topCoding sequence (CDS) from alignment at CM002456.1:820175..820954+ >rna953 ID=rna953|Name=rna953|organism=Nannochloropsis gaditana|type=CDS|length=2043bp|location=Sequence derived from alignment at CM002456.1:820175..820954+ (Nannochloropsis gaditana)
ATGTCGTTCCCTTGGTCAATCCGTTCCGAGAATTCGTCCGATGAGATAGT
GTTCGAGGTGatttgggaggaggtggcgaccTCTCCTGGTAGTAAGTCTG
ACGCGACGCTGTTTCTGGGCGTGACGGAAGGTTCGCGGGAGCAGCTACTC
AGAATAAGCTCGGAGATGGCATCGGTGACATTGGTGGAGCAGTGTTCTTG
TGAGCATCTGGAAGCCATGGACTGCACACGCGAGACTGTGCGGGAGTATC
GTGCGGACCTGACCAATGCTGTGCACATGGCGGAGCTGACCAGCTTGGAG
TCGTGGACAGCAGTCGTATTGTTACCAAGCGACAAGAGCATGATGATCCG
ACAAAGTTTGGCTTTGGTGAAGGGGGCATTGTCGCCGAGCGCAGGCAAGA
GAAGCGTGTCATCGCTCTGGTTTGTGAGTGCAGGGGCATTGCCGGTAGGC
GAGGAAAGCGTAAAGGATGAGGCAAGCGCACGGCAATCGTGGTTGTCAGG
TTTCGTGAAGACAGTAGGGATTGAGCACGCAGAGCTGGGTGTGCGGCATG
TGGATGTACGATCCGATGACGACGGGGTGATTGACGATATAAGCCATTTG
CTGGGCGGTGCTATGTCATtgccggagaaggagatggaaCGAGCAAGGAG
CAGATCTCTGCTTCGGAGCACTTTGGGGTAGATGTCGTTCCCTTGGTCAA
TCCGTTCCGAGAATTCGTCCGATGAGATAGTGTTCGAGGTGatttgggag
gaggtggcgaccTCTCCTGGTAGTAAGTCTGACGCGACGCTGTTTCTGGG
CGTGACGGAAGGTTCGCGGGAGCAGCTACTCAGAATAAGCTCGGAGATGG
CATCGGTGACATTGGTGGAGCAGTGTTCTTGTGAGCATCTGGAAGCCATG
GACTGCACACGCGAGACTGTGCGGGAGTATCGTGCGGACCTGACCAATGC
TGTGCACATGGCGGAGCTGACCAGCTTGGAGTCGTGGACAGCAGTCGTAT
TGTTACCAAGCGACAAGAGCATGATGATCCGACAAAGTTTGGCTTTGGTG
AAGGGGGCATTGTCGCCGAGCGCAGGCAAGAGAAGCGTGTCATCGCTCTG
GTTTGTGAGTGCAGGGGCATTGCCGGTAGGCGAGGAAAGCGTAAAGGATG
AGGCAAGCGCACGGCAATCGTGGTTGTCAGGTTTCGTGAAGACAGTAGGG
ATTGAGCACGCAGAGCTGGGTGTGCGGCATGTGGATGTACGATCCGATGA
CGACGGGGTGATTGACGATATAAGCCATTTGCTGGGCGGTGCTATGTCAT
tgccggagaaggagatggaaCGAGCAAGGAGCAGATCTCTGCTTCGGAGC
ACTTTGGGGTAGATGTCGTTCCCTTGGTCAATCCGTTCCGAGAATTCGTC
CGATGAGATAGTGTTCGAGGTGatttgggaggaggtggcgaccTCTCCTG
GTAGTAAGTCTGACGCGACGCTGTTTCTGGGCGTGACGGAAGGTTCGCGG
GAGCAGCTACTCAGAATAAGCTCGGAGATGGCATCGGTGACATTGGTGGA
GCAGTGTTCTTGTGAGCATCTGGAAGCCATGGACTGCACACGCGAGACTG
TGCGGGAGTATCGTGCGGACCTGACCAATGCTGTGCACATGGCGGAGCTG
ACCAGCTTGGAGTCGTGGACAGCAGTCGTATTGTTACCAAGCGACAAGAG
CATGATGATCCGACAAAGTTTGGCTTTGGTGAAGGGGGCATTGTCGCCGA
GCGCAGGCAAGAGAAGCGTGTCATCGCTCTGGTTTGTGAGTGCAGGGGCA
TTGCCGGTAGGCGAGGAAAGCGTAAAGGATGAGGCAAGCGCACGGCAATC
GTGGTTGTCAGGTTTCGTGAAGACAGTAGGGATTGAGCACGCAGAGCTGG
GTGTGCGGCATGTGGATGTACGATCCGATGACGACGGGGTGATTGACGAT
ATAAGCCATTTGCTGGGCGGTGCTATGTCATtgccggagaaggagatgga
aCGAGCAAGGAGCAGATCTCTGCTTCGGAGCACTTTGGGGTAG back to top
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