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Properties
Property Name | Value |
Product | tetratricopeptide repeat containing protein 4 |
Orig transcript id | gnl|cribi|Naga_100474g2.5242.mrna |
Orig protein id | gnl|cribi|Naga_100474g2.5242 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KK037254.1 | supercontig | KK037254.1:23942..26248 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9510 ID=rna9510|Name=rna9510|organism=Nannochloropsis gaditana|type=mRNA|length=279bp ATGTGGCATGGGTCTGGCCATATGGGGCTCCTCCTTCTCCTGGTGTCTTG TGCCACTGCCTTCCTCCTTCCTGCCGCGCCCTCCCCACGCGCCATCTCTT CCTCAACCAAGAACCCAATAGCTCGTTTCGCGTCCTCCATCGACGAGGCG CCTTCTCTGGTGGAACGACAGGAACCGCAACCTCAAGCACAACAGGAGCC ACCCCCGCGTGGTAATGCGCGCCGCCCTCTGTCCCCGAAGCCCGCAGGAC CTTGGGTGCTTCTGGAAGGTGAGCTCTGA back to topprotein sequence of rna9510 >rna9510-protein ID=rna9510-protein|Name=rna9510|organism=Nannochloropsis gaditana|type=polypeptide|length=509bp MVASPPSMATTSDDGTSAKEMPSLVVGDQIAAGTGGINQALAEGRGWSDE DVLAYAKTIGDNHPMFAETLEEMDPAMVDAIQAIKLGGKNAKQLALQAKS HGNELFGWGKKNPAQYSNCLPSYDEAEKYALAVPLLPEPSQASGGEETPA QDARHGQEEEEDCLSKAEQAVLLSQIYANRAMAHLMLKNYRSCQQDCTRA LARLPSNVKAHYRLARACFALGQYPEAIKACMAAVRRLKLRLNDQKKRAL AQAERRAGRRKALRAAWTMCQARGVRIGRPPWCEEAQGGGEARRRAEALP WEEAGAGGPQVGVWSLLLLYPEYATSDFVAAVEETGMVAQVLAEVLPEEE EGREGGAAGWDMRGDYTCSRLEVYFQAVRTGAGKGEVLPSEEAYVEAVED MYGRIGVGGGDYAKEGGEEGGREGGEEEKWGPPEAYWVHVHVGCRLLNVL QHPDYLLPATCPTLHVFARNSPAHSAFLGEHGATMRSLLPAGKGVGAREV PGGLETKGR back to topmRNA from alignment at KK037254.1:23942..26248+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9510 ID=rna9510|Name=rna9510|organism=Nannochloropsis gaditana|type=mRNA|length=2307bp|location=Sequence derived from alignment at KK037254.1:23942..26248+ (Nannochloropsis gaditana) ATGGTTGCGTCCCCACCCTCAATGGCTACAACTTCCGATGACGGTACTTC
AGCAAAGGAAATGCCGTCGCTTGTTGTGGGAGATCAAATAGcggcgggca
cgggggggatTAATCAGGCCTTGgctgaggggaggggatggtcCGATGAG
GATGTGTTGGCTTACGCTAAAACCATTGGGGACAACCATCCTATGTTTGC
AGAGACTCTAGAGGTACGTAGATGACGAATTACTGGGTGGATGGCCGGGT
ATATTCGCGGCAGCATGCAGGGAATAGGAGGATGAGTGGGTGGGAAGTGC
AGCAGCACTCGGGCCTCTGAGCGTCCTCAAAACGGCCGATGTCTGCTTAC
AGGCATAGGAGTCCACACAGAAAGTTCTTCTATATGAGCCTTGATTTTCT
GTGTCAATAACAATACGCACGTactgtctccttctcccctttcttagGAA
ATGGACCCTGCCATGGTCGACGCCATCCAAGCCATCAAGTTGGGCGGGAA
GAACGCGAAACAGCTGGCTCTGCAGGCGAAAAGTAATGCGCGGGGATGGG
CATgaagggtggaaaaggaggactcGATGGGATGGCGATGGTGGGGCGGT
GGAGTATATGGTCTTGCGGACATTGCTGAGAAGAGGTCTCATCACGTCAC
TTgacaccctccctccctcccttcctccctccctcccttcttttctgtcc
tcctgcctctcccccaccccctatTTCGTTCGAGCAGGTCACGGAAACGA
ACTCTTCGGATGGGGCAAAAAGAACCCCGCGCAATACAGTAATTGCCTGC
CCTCGTACGACGAAGCGGAGAAGTACGCCCTCGCCGTGCCCCTCCTACCA
GAGCCGTCGCAGGCatcgggaggggaggaaacaCCCGCCCAGGACGCCAG
ACAcggtcaagaggaggaagaggactgcCTCTCCAAAGCGGAGCAGGCCG
TGCTCCTATCCCAGATCTACGCCAACCGGGCCATGGCCCATCTCATGTTG
AAGTACGtacggatcggatcggtcctccccccctcctggcccggACGGAC
CCGCTCGAAGCTTGCGCccagcctctttcctccctccctccctccctccc
tccctccctcatcttcctcagGAACTACCGGTCCTGCCAACAGGATTGCA
CCCGAgcccttgcccgcctcccttccaacGTGAAGGCCCACTACCGGCTT
GCGCGGGCCTGTTTTGCCCTAGGACAATACCCGGAGGCGATCAAAGCGTG
CATGGCCGGTCTGGACCagtgccctccctcccgccctccctcccgccctc
cctcccgccctccctcccgcccagagggtgcggagggagggaaagagggg
gcggaggagacgggaCAAAATCCttcgaccgcctcccccccctcccctcc
tccctcccttcctcccgccctctctggTCCACCCGAGGACCCGaaccgcg
ccctcctccttgcccttcgcGAGCAAGCCGTCCGACGCCTGAAGCTTCGG
TTGAACGATCAGAAAAAGCGGGCCCTGGCGCaggcagaaaggagggcggg
acggaggaaggcgttGCGGGCGGCCTGGACCATGTGCCAGGCGCGAGGGG
TCCGGATCGGTCGACCTCCATGGTGCGAGGAGGCCCAGGGTGGGGGCGAG
GCACGGAGGCGGGCAGAGGCCTTGCcatgggaggaggcaggggcgggagg
gcctCAGGTTGGGGTGTGGTCCTTACTGTTGCTCTACCCCGAGTATGCGA
CCAGCGACTtcgtggcggcggtggaggagacagggatgGTGGCCcaggtg
ctggcggaggtCTTgcccgaggaagaggaagggagggagggcggggcagc
ggGGTGGGATATGCGGGGAGACTACACGTGCTCGCGCTTGGAGGTGTATT
TCCAGGCAGTCAGGAcgggagcagggaaaggggaggtgtTGCCAAGCGAG
GAAGCCTATGtcgaggcggtggaagacaTGTATGGGAGGATAGGGGTCGG
TGGGGGGGACtacgcgaaggagggaggggaggagggagggagggagggag
gggaggaggaaaagtgggGGCCGCCGGAGGCGTACTGGGTGCATGTGCAC
GTGGGCTGCCGACTTCTGAACGTGTTGCAACACCCAGATTATCTGCTCCC
GGCCACCTGCCCGACGTTGCATGTCTTTGCCCGAAATTCCCCGGCCCACT
CGGCCTTTCTCGGGGAACACGGGGCCACCATGCGGAGCTTGCTCCCAGCA
GGAAAGGGGGTTGGGGCACGGGAGGTTCCCGGTGGCTTGGAAACGAAAGG
GAGGTAA back to topCoding sequence (CDS) from alignment at KK037254.1:23942..26248+ >rna9510 ID=rna9510|Name=rna9510|organism=Nannochloropsis gaditana|type=CDS|length=7650bp|location=Sequence derived from alignment at KK037254.1:23942..26248+ (Nannochloropsis gaditana) ATGGTTGCGTCCCCACCCTCAATGGCTACAACTTCCGATGACGGTACTTC AGCAAAGGAAATGCCGTCGCTTGTTGTGGGAGATCAAATAGcggcgggca cgggggggatTAATCAGGCCTTGgctgaggggaggggatggtcCGATGAG GATGTGTTGGCTTACGCTAAAACCATTGGGGACAACCATCCTATGTTTGC AGAGACTCTAGAGGAAATGGACCCTGCCATGGTCGACGCCATCCAAGCCA TCAAGTTGGGCGGGAAGAACGCGAAACAGCTGGCTCTGCAGGCGAAAAGT CACGGAAACGAACTCTTCGGATGGGGCAAAAAGAACCCCGCGCAATACAG TAATTGCCTGCCCTCGTACGACGAAGCGGAGAAGTACGCCCTCGCCGTGC CCCTCCTACCAGAGCCGTCGCAGGCatcgggaggggaggaaacaCCCGCC CAGGACGCCAGACAcggtcaagaggaggaagaggactgcCTCTCCAAAGC GGAGCAGGCCGTGCTCCTATCCCAGATCTACGCCAACCGGGCCATGGCCC ATCTCATGTTGAAGAACTACCGGTCCTGCCAACAGGATTGCACCCGAgcc cttgcccgcctcccttccaacGTGAAGGCCCACTACCGGCTTGCGCGGGC CTGTTTTGCCCTAGGACAATACCCGGAGGCGATCAAAGCGTGCATGGCCG CCGTCCGACGCCTGAAGCTTCGGTTGAACGATCAGAAAAAGCGGGCCCTG GCGCaggcagaaaggagggcgggacggaggaaggcgttGCGGGCGGCCTG GACCATGTGCCAGGCGCGAGGGGTCCGGATCGGTCGACCTCCATGGTGCG AGGAGGCCCAGGGTGGGGGCGAGGCACGGAGGCGGGCAGAGGCCTTGCca tgggaggaggcaggggcgggagggcctCAGGTTGGGGTGTGGTCCTTACT GTTGCTCTACCCCGAGTATGCGACCAGCGACTtcgtggcggcggtggagg agacagggatgGTGGCCcaggtgctggcggaggtCTTgcccgaggaagag gaagggagggagggcggggcagcggGGTGGGATATGCGGGGAGACTACAC GTGCTCGCGCTTGGAGGTGTATTTCCAGGCAGTCAGGAcgggagcaggga aaggggaggtgtTGCCAAGCGAGGAAGCCTATGtcgaggcggtggaagac aTGTATGGGAGGATAGGGGTCGGTGGGGGGGACtacgcgaaggagggagg ggaggagggagggagggagggaggggaggaggaaaagtgggGGCCGCCGG AGGCGTACTGGGTGCATGTGCACGTGGGCTGCCGACTTCTGAACGTGTTG CAACACCCAGATTATCTGCTCCCGGCCACCTGCCCGACGTTGCATGTCTT TGCCCGAAATTCCCCGGCCCACTCGGCCTTTCTCGGGGAACACGGGGCCA CCATGCGGAGCTTGCTCCCAGCAGGAAAGGGGGTTGGGGCACGGGAGGTT CCCGGTGGCTTGGAAACGAAAGGGAGGTAAATGGTTGCGTCCCCACCCTC AATGGCTACAACTTCCGATGACGGTACTTCAGCAAAGGAAATGCCGTCGC TTGTTGTGGGAGATCAAATAGcggcgggcacgggggggatTAATCAGGCC TTGgctgaggggaggggatggtcCGATGAGGATGTGTTGGCTTACGCTAA AACCATTGGGGACAACCATCCTATGTTTGCAGAGACTCTAGAGGAAATGG ACCCTGCCATGGTCGACGCCATCCAAGCCATCAAGTTGGGCGGGAAGAAC GCGAAACAGCTGGCTCTGCAGGCGAAAAGTCACGGAAACGAACTCTTCGG ATGGGGCAAAAAGAACCCCGCGCAATACAGTAATTGCCTGCCCTCGTACG ACGAAGCGGAGAAGTACGCCCTCGCCGTGCCCCTCCTACCAGAGCCGTCG CAGGCatcgggaggggaggaaacaCCCGCCCAGGACGCCAGACAcggtca agaggaggaagaggactgcCTCTCCAAAGCGGAGCAGGCCGTGCTCCTAT CCCAGATCTACGCCAACCGGGCCATGGCCCATCTCATGTTGAAGAACTAC CGGTCCTGCCAACAGGATTGCACCCGAgcccttgcccgcctcccttccaa cGTGAAGGCCCACTACCGGCTTGCGCGGGCCTGTTTTGCCCTAGGACAAT ACCCGGAGGCGATCAAAGCGTGCATGGCCGCCGTCCGACGCCTGAAGCTT CGGTTGAACGATCAGAAAAAGCGGGCCCTGGCGCaggcagaaaggagggc gggacggaggaaggcgttGCGGGCGGCCTGGACCATGTGCCAGGCGCGAG GGGTCCGGATCGGTCGACCTCCATGGTGCGAGGAGGCCCAGGGTGGGGGC GAGGCACGGAGGCGGGCAGAGGCCTTGCcatgggaggaggcaggggcggg agggcctCAGGTTGGGGTGTGGTCCTTACTGTTGCTCTACCCCGAGTATG CGACCAGCGACTtcgtggcggcggtggaggagacagggatgGTGGCCcag gtgctggcggaggtCTTgcccgaggaagaggaagggagggagggcggggc agcggGGTGGGATATGCGGGGAGACTACACGTGCTCGCGCTTGGAGGTGT ATTTCCAGGCAGTCAGGAcgggagcagggaaaggggaggtgtTGCCAAGC GAGGAAGCCTATGtcgaggcggtggaagacaTGTATGGGAGGATAGGGGT CGGTGGGGGGGACtacgcgaaggagggaggggaggagggagggagggagg gaggggaggaggaaaagtgggGGCCGCCGGAGGCGTACTGGGTGCATGTG CACGTGGGCTGCCGACTTCTGAACGTGTTGCAACACCCAGATTATCTGCT CCCGGCCACCTGCCCGACGTTGCATGTCTTTGCCCGAAATTCCCCGGCCC ACTCGGCCTTTCTCGGGGAACACGGGGCCACCATGCGGAGCTTGCTCCCA GCAGGAAAGGGGGTTGGGGCACGGGAGGTTCCCGGTGGCTTGGAAACGAA AGGGAGGTAAATGGTTGCGTCCCCACCCTCAATGGCTACAACTTCCGATG ACGGTACTTCAGCAAAGGAAATGCCGTCGCTTGTTGTGGGAGATCAAATA GcggcgggcacgggggggatTAATCAGGCCTTGgctgaggggaggggatg gtcCGATGAGGATGTGTTGGCTTACGCTAAAACCATTGGGGACAACCATC CTATGTTTGCAGAGACTCTAGAGGAAATGGACCCTGCCATGGTCGACGCC ATCCAAGCCATCAAGTTGGGCGGGAAGAACGCGAAACAGCTGGCTCTGCA GGCGAAAAGTCACGGAAACGAACTCTTCGGATGGGGCAAAAAGAACCCCG CGCAATACAGTAATTGCCTGCCCTCGTACGACGAAGCGGAGAAGTACGCC CTCGCCGTGCCCCTCCTACCAGAGCCGTCGCAGGCatcgggaggggagga aacaCCCGCCCAGGACGCCAGACAcggtcaagaggaggaagaggactgcC TCTCCAAAGCGGAGCAGGCCGTGCTCCTATCCCAGATCTACGCCAACCGG GCCATGGCCCATCTCATGTTGAAGAACTACCGGTCCTGCCAACAGGATTG CACCCGAgcccttgcccgcctcccttccaacGTGAAGGCCCACTACCGGC TTGCGCGGGCCTGTTTTGCCCTAGGACAATACCCGGAGGCGATCAAAGCG TGCATGGCCGCCGTCCGACGCCTGAAGCTTCGGTTGAACGATCAGAAAAA GCGGGCCCTGGCGCaggcagaaaggagggcgggacggaggaaggcgttGC GGGCGGCCTGGACCATGTGCCAGGCGCGAGGGGTCCGGATCGGTCGACCT CCATGGTGCGAGGAGGCCCAGGGTGGGGGCGAGGCACGGAGGCGGGCAGA GGCCTTGCcatgggaggaggcaggggcgggagggcctCAGGTTGGGGTGT GGTCCTTACTGTTGCTCTACCCCGAGTATGCGACCAGCGACTtcgtggcg gcggtggaggagacagggatgGTGGCCcaggtgctggcggaggtCTTgcc cgaggaagaggaagggagggagggcggggcagcggGGTGGGATATGCGGG GAGACTACACGTGCTCGCGCTTGGAGGTGTATTTCCAGGCAGTCAGGAcg ggagcagggaaaggggaggtgtTGCCAAGCGAGGAAGCCTATGtcgaggc ggtggaagacaTGTATGGGAGGATAGGGGTCGGTGGGGGGGACtacgcga aggagggaggggaggagggagggagggagggaggggaggaggaaaagtgg gGGCCGCCGGAGGCGTACTGGGTGCATGTGCACGTGGGCTGCCGACTTCT GAACGTGTTGCAACACCCAGATTATCTGCTCCCGGCCACCTGCCCGACGT TGCATGTCTTTGCCCGAAATTCCCCGGCCCACTCGGCCTTTCTCGGGGAA CACGGGGCCACCATGCGGAGCTTGCTCCCAGCAGGAAAGGGGGTTGGGGC ACGGGAGGTTCCCGGTGGCTTGGAAACGAAAGGGAGGTAAATGGTTGCGT CCCCACCCTCAATGGCTACAACTTCCGATGACGGTACTTCAGCAAAGGAA ATGCCGTCGCTTGTTGTGGGAGATCAAATAGcggcgggcacgggggggat TAATCAGGCCTTGgctgaggggaggggatggtcCGATGAGGATGTGTTGG CTTACGCTAAAACCATTGGGGACAACCATCCTATGTTTGCAGAGACTCTA GAGGAAATGGACCCTGCCATGGTCGACGCCATCCAAGCCATCAAGTTGGG CGGGAAGAACGCGAAACAGCTGGCTCTGCAGGCGAAAAGTCACGGAAACG AACTCTTCGGATGGGGCAAAAAGAACCCCGCGCAATACAGTAATTGCCTG CCCTCGTACGACGAAGCGGAGAAGTACGCCCTCGCCGTGCCCCTCCTACC AGAGCCGTCGCAGGCatcgggaggggaggaaacaCCCGCCCAGGACGCCA GACAcggtcaagaggaggaagaggactgcCTCTCCAAAGCGGAGCAGGCC GTGCTCCTATCCCAGATCTACGCCAACCGGGCCATGGCCCATCTCATGTT GAAGAACTACCGGTCCTGCCAACAGGATTGCACCCGAgcccttgcccgcc tcccttccaacGTGAAGGCCCACTACCGGCTTGCGCGGGCCTGTTTTGCC CTAGGACAATACCCGGAGGCGATCAAAGCGTGCATGGCCGCCGTCCGACG CCTGAAGCTTCGGTTGAACGATCAGAAAAAGCGGGCCCTGGCGCaggcag aaaggagggcgggacggaggaaggcgttGCGGGCGGCCTGGACCATGTGC CAGGCGCGAGGGGTCCGGATCGGTCGACCTCCATGGTGCGAGGAGGCCCA GGGTGGGGGCGAGGCACGGAGGCGGGCAGAGGCCTTGCcatgggaggagg caggggcgggagggcctCAGGTTGGGGTGTGGTCCTTACTGTTGCTCTAC CCCGAGTATGCGACCAGCGACTtcgtggcggcggtggaggagacagggat gGTGGCCcaggtgctggcggaggtCTTgcccgaggaagaggaagggaggg agggcggggcagcggGGTGGGATATGCGGGGAGACTACACGTGCTCGCGC TTGGAGGTGTATTTCCAGGCAGTCAGGAcgggagcagggaaaggggaggt gtTGCCAAGCGAGGAAGCCTATGtcgaggcggtggaagacaTGTATGGGA GGATAGGGGTCGGTGGGGGGGACtacgcgaaggagggaggggaggaggga gggagggagggaggggaggaggaaaagtgggGGCCGCCGGAGGCGTACTG GGTGCATGTGCACGTGGGCTGCCGACTTCTGAACGTGTTGCAACACCCAG ATTATCTGCTCCCGGCCACCTGCCCGACGTTGCATGTCTTTGCCCGAAAT TCCCCGGCCCACTCGGCCTTTCTCGGGGAACACGGGGCCACCATGCGGAG CTTGCTCCCAGCAGGAAAGGGGGTTGGGGCACGGGAGGTTCCCGGTGGCT TGGAAACGAAAGGGAGGTAAATGGTTGCGTCCCCACCCTCAATGGCTACA ACTTCCGATGACGGTACTTCAGCAAAGGAAATGCCGTCGCTTGTTGTGGG AGATCAAATAGcggcgggcacgggggggatTAATCAGGCCTTGgctgagg ggaggggatggtcCGATGAGGATGTGTTGGCTTACGCTAAAACCATTGGG GACAACCATCCTATGTTTGCAGAGACTCTAGAGGAAATGGACCCTGCCAT GGTCGACGCCATCCAAGCCATCAAGTTGGGCGGGAAGAACGCGAAACAGC TGGCTCTGCAGGCGAAAAGTCACGGAAACGAACTCTTCGGATGGGGCAAA AAGAACCCCGCGCAATACAGTAATTGCCTGCCCTCGTACGACGAAGCGGA GAAGTACGCCCTCGCCGTGCCCCTCCTACCAGAGCCGTCGCAGGCatcgg gaggggaggaaacaCCCGCCCAGGACGCCAGACAcggtcaagaggaggaa gaggactgcCTCTCCAAAGCGGAGCAGGCCGTGCTCCTATCCCAGATCTA CGCCAACCGGGCCATGGCCCATCTCATGTTGAAGAACTACCGGTCCTGCC AACAGGATTGCACCCGAgcccttgcccgcctcccttccaacGTGAAGGCC CACTACCGGCTTGCGCGGGCCTGTTTTGCCCTAGGACAATACCCGGAGGC GATCAAAGCGTGCATGGCCGCCGTCCGACGCCTGAAGCTTCGGTTGAACG ATCAGAAAAAGCGGGCCCTGGCGCaggcagaaaggagggcgggacggagg aaggcgttGCGGGCGGCCTGGACCATGTGCCAGGCGCGAGGGGTCCGGAT CGGTCGACCTCCATGGTGCGAGGAGGCCCAGGGTGGGGGCGAGGCACGGA GGCGGGCAGAGGCCTTGCcatgggaggaggcaggggcgggagggcctCAG GTTGGGGTGTGGTCCTTACTGTTGCTCTACCCCGAGTATGCGACCAGCGA CTtcgtggcggcggtggaggagacagggatgGTGGCCcaggtgctggcgg aggtCTTgcccgaggaagaggaagggagggagggcggggcagcggGGTGG GATATGCGGGGAGACTACACGTGCTCGCGCTTGGAGGTGTATTTCCAGGC AGTCAGGAcgggagcagggaaaggggaggtgtTGCCAAGCGAGGAAGCCT ATGtcgaggcggtggaagacaTGTATGGGAGGATAGGGGTCGGTGGGGGG GACtacgcgaaggagggaggggaggagggagggagggagggaggggagga ggaaaagtgggGGCCGCCGGAGGCGTACTGGGTGCATGTGCACGTGGGCT GCCGACTTCTGAACGTGTTGCAACACCCAGATTATCTGCTCCCGGCCACC TGCCCGACGTTGCATGTCTTTGCCCGAAATTCCCCGGCCCACTCGGCCTT TCTCGGGGAACACGGGGCCACCATGCGGAGCTTGCTCCCAGCAGGAAAGG GGGTTGGGGCACGGGAGGTTCCCGGTGGCTTGGAAACGAAAGGGAGGTAA back to top
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