EWM21192.1, cds9479 (CDS) Nannochloropsis gaditana

Overview
NameEWM21192.1
Unique Namecds9479
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:23942..24154 +
Alignment locationKK037254.1:24389..24473 +
Alignment locationKK037254.1:24679..24943 +
Alignment locationKK037254.1:25063..25199 +
Alignment locationKK037254.1:25419..26248 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21192.1
Producttetratricopeptide repeat containing protein 4
Orig transcript idgnl|cribi|Naga_100474g2.5242.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:23942..24154 +
KK037254.1supercontigKK037254.1:24389..24473 +
KK037254.1supercontigKK037254.1:24679..24943 +
KK037254.1supercontigKK037254.1:25063..25199 +
KK037254.1supercontigKK037254.1:25419..26248 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom
IPR019734TPR_repeat
Homology
BLAST of EWM21192.1 vs. NCBI_GenBank
Match: gi|585101276|gb|EWM21192.1| (tetratricopeptide repeat containing protein 4 [Nannochloropsis gaditana])

HSP 1 Score: 1036.94 bits (2680), Expect = 0.000e+0
Identity = 509/509 (100.00%), Postives = 509/509 (100.00%), Query Frame = 0
Query:    1 MVASPPSMATTSDDGTSAKEMPSLVVGDQIAAGTGGINQALAEGRGWSDEDVLAYAKTIGDNHPMFAETLEEMDPAMVDAIQAIKLGGKNAKQLALQAKSHGNELFGWGKKNPAQYSNCLPSYDEAEKYALAVPLLPEPSQASGGEETPAQDARHGQEEEEDCLSKAEQAVLLSQIYANRAMAHLMLKNYRSCQQDCTRALARLPSNVKAHYRLARACFALGQYPEAIKACMAAVRRLKLRLNDQKKRALAQAERRAGRRKALRAAWTMCQARGVRIGRPPWCEEAQGGGEARRRAEALPWEEAGAGGPQVGVWSLLLLYPEYATSDFVAAVEETGMVAQVLAEVLPEEEEGREGGAAGWDMRGDYTCSRLEVYFQAVRTGAGKGEVLPSEEAYVEAVEDMYGRIGVGGGDYAKEGGEEGGREGGEEEKWGPPEAYWVHVHVGCRLLNVLQHPDYLLPATCPTLHVFARNSPAHSAFLGEHGATMRSLLPAGKGVGAREVPGGLETKGR 509
            MVASPPSMATTSDDGTSAKEMPSLVVGDQIAAGTGGINQALAEGRGWSDEDVLAYAKTIGDNHPMFAETLEEMDPAMVDAIQAIKLGGKNAKQLALQAKSHGNELFGWGKKNPAQYSNCLPSYDEAEKYALAVPLLPEPSQASGGEETPAQDARHGQEEEEDCLSKAEQAVLLSQIYANRAMAHLMLKNYRSCQQDCTRALARLPSNVKAHYRLARACFALGQYPEAIKACMAAVRRLKLRLNDQKKRALAQAERRAGRRKALRAAWTMCQARGVRIGRPPWCEEAQGGGEARRRAEALPWEEAGAGGPQVGVWSLLLLYPEYATSDFVAAVEETGMVAQVLAEVLPEEEEGREGGAAGWDMRGDYTCSRLEVYFQAVRTGAGKGEVLPSEEAYVEAVEDMYGRIGVGGGDYAKEGGEEGGREGGEEEKWGPPEAYWVHVHVGCRLLNVLQHPDYLLPATCPTLHVFARNSPAHSAFLGEHGATMRSLLPAGKGVGAREVPGGLETKGR
Sbjct:    1 MVASPPSMATTSDDGTSAKEMPSLVVGDQIAAGTGGINQALAEGRGWSDEDVLAYAKTIGDNHPMFAETLEEMDPAMVDAIQAIKLGGKNAKQLALQAKSHGNELFGWGKKNPAQYSNCLPSYDEAEKYALAVPLLPEPSQASGGEETPAQDARHGQEEEEDCLSKAEQAVLLSQIYANRAMAHLMLKNYRSCQQDCTRALARLPSNVKAHYRLARACFALGQYPEAIKACMAAVRRLKLRLNDQKKRALAQAERRAGRRKALRAAWTMCQARGVRIGRPPWCEEAQGGGEARRRAEALPWEEAGAGGPQVGVWSLLLLYPEYATSDFVAAVEETGMVAQVLAEVLPEEEEGREGGAAGWDMRGDYTCSRLEVYFQAVRTGAGKGEVLPSEEAYVEAVEDMYGRIGVGGGDYAKEGGEEGGREGGEEEKWGPPEAYWVHVHVGCRLLNVLQHPDYLLPATCPTLHVFARNSPAHSAFLGEHGATMRSLLPAGKGVGAREVPGGLETKGR 509          
BLAST of EWM21192.1 vs. NCBI_GenBank
Match: gi|553188512|ref|XP_005854810.1| (tpr repeat protein [Nannochloropsis gaditana CCMP526] >gi|422294246|gb|EKU21546.1| tpr repeat protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 555.444 bits (1430), Expect = 0.000e+0
Identity = 289/364 (79.40%), Postives = 292/364 (80.22%), Query Frame = 0
Query:   21 MPSLVVGDQIAAGTGGINQALAEGRGWSDEDVLAYAKTIGDNHPMFAETLEEMDPAMVDAIQAIKLGGKNAKQLALQAKSHGNELFGWGKKNPAQYSNCLPSYDEAEKYALAVPLLPEPSQASGGEETPAQDARHGQEEEEDCLSKAEQAVLLSQIYANRAMAHLMLKNYRSCQQDCTRALARLPSNVKAHYRLARACFALGQYPEAIKACMAAV--------------------------------------------------RRLKLRLNDQKKRAL------------AQAERRAGRRKALRAAWTMCQARGVRIGRPPWCEEAQGGGEARRRAEALPWEEAGAGGPQVGVWSLLLLYPE 322
            MPSLVVGDQIAAGTGGINQALAEGRGWSDEDVLAYAKTIGDNHPMFAETLEEMDPAMVDAIQAIKLGGKNAKQLALQAKSHGNELFGWGKKNPAQYSNCLPSYDEAEKYALAVPLLPEPSQASGGEETPA +ARHGQEEEEDCLSKAEQAVLLSQIYANRAMAHLMLKNYRSCQQDCTRALARLPSNVKAHYRLARACFALGQYPEAIKACMA +                                                  R L L L  Q  R L            AQAERRAGRRKALRAAWTMCQARGVRIGRPPWCEEAQGGGEARRRAEALPWEEAGAGGPQVGVWSLLLLYP+
Sbjct:    1 MPSLVVGDQIAAGTGGINQALAEGRGWSDEDVLAYAKTIGDNHPMFAETLEEMDPAMVDAIQAIKLGGKNAKQLALQAKSHGNELFGWGKKNPAQYSNCLPSYDEAEKYALAVPLLPEPSQASGGEETPAHNARHGQEEEEDCLSKAEQAVLLSQIYANRAMAHLMLKNYRSCQQDCTRALARLPSNVKAHYRLARACFALGQYPEAIKACMAGLDQCPASRPPSRTEGGKEGAEETGQNPSTASPPSPPPSLPPALSGPPEDPNRALLLALRGQAVRRLKLRLNDQKKRALAQAERRAGRRKALRAAWTMCQARGVRIGRPPWCEEAQGGGEARRRAEALPWEEAGAGGPQVGVWSLLLLYPD 364          
BLAST of EWM21192.1 vs. NCBI_GenBank
Match: gi|298706331|emb|CBJ29346.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 177.178 bits (448), Expect = 1.796e-46
Identity = 139/468 (29.70%), Postives = 209/468 (44.66%), Query Frame = 0
Query:   37 INQALAEGRGWSDEDVLAYAKTIGDN-HPMFAETLEEMDPAMVDAIQAIKLGGKNAKQLALQAKSHGNELFGWGKKNPAQYSNCLPSYDEAEKYALAVPLLPEPSQASGGEETPAQDARHGQEEEEDCLSKAEQAVLLSQIYANRAMAHLMLKNYRSCQQDCTRALARLPSNVKAHYRLARACFALGQYPEAIKACMAAVR-----RLKLRLNDQKKRALAQAE--------RRAGRRKALRAAWTMCQARGVRIGRPPWCEEAQGGGEARRRAEALPWEEAGAGGPQVGVWSLLLLYPEYATSDFVAAVEETGMVAQVLAEVLPEEEEGREGGAAGWDMRGDYTCSRLEVYFQAVRTGAGKGEVLPSEEAYVEAVEDMYGRIGVGGGDYAKEGGEEGGREGGEEEKWGPPEAYWVHVHVGCRLLNVLQHPDYLLPATCPTLHVFARNSPAHSAFLGEHGATMRSLLP 490
            I++A+  G+GW + +  AY K + +  HPMFAE+++EMDP +V A Q +    +    L    K  GN+ F  GKKN   + +   +Y E  +                GEETP                  E   ++  + +NRAMA+L LKNY SC++DC  ALA  P +VK  YR  +A   L ++ EA+  C   ++        L++  +  RAL  AE         +  R + L A W  C+A GV++G P   +E+       +R   LP  +   G     +W +LLLYP+Y  SD + A  +  M+A+ LA   PE     EG  A WD   +Y CS L +Y           E  PS   +V   E M      G  + ++   E          +       W  VH GC LL +L   D+++    PTL +F ++  +H  FL + G  + +L P
Sbjct:   22 IDKAVKAGKGWKEGEREAYLKRVREEEHPMFAESIDEMDPGVVKAFQDLTYEDETPLSLGEHFKQLGNDRFKRGKKNAMYFRHAQQAYTEGLR------------NVRLGEETP------------------ELTAMVVALLSNRAMANLALKNYGSCRKDCDEALALSPGHVKCLYRKGKAELMLRRHGEALAVCEEGLKIDPSNTELLKIKKECGRALKAAEDATAALNREKEERLERLAAVWDECEAAGVKLG-PSGFDESNH----EQRNAFLPMADDEHGDKGGVIWPVLLLYPQYGQSDLIQAFRDADMLAEHLAAAFPE-----EGPPAPWDTSFEYRCSELVIYLPLRPV-----EPSPSVFDWVAEFEKMEAAKVSGAEEMSRRSKERAAATAAAAAR----PQRWARVHPGCTLLRILSFEDHVVAGATPTLLLFPKDGQSHKDFLRDSGGRIFTLDP 440          
BLAST of EWM21192.1 vs. NCBI_GenBank
Match: gi|1173958936|gb|OQS05226.1| (hypothetical protein THRCLA_20685 [Thraustotheca clavata])

HSP 1 Score: 157.918 bits (398), Expect = 1.990e-39
Identity = 128/459 (27.89%), Postives = 204/459 (44.44%), Query Frame = 0
Query:   36 GINQALAEGRGWSDEDVLAYAKTIGDNHPMFAETLEEMDPAMVDAIQAIKLGGKNAKQLALQAKSHGNELFGWGKKNPAQYSNCLPSYDEAEKY---ALAVPLLPEPSQASGGEETPAQDARHGQEEEEDCLSKAEQAVLLSQIYANRAMAHLMLKNYRSCQQDCTRALARLPSNVKAHYRLARACFALGQYPEAIKAC------------MAAVRRLKLRLNDQKKRALAQAERRAGRRKALRAAW-TMCQARGVRIGRPPWCEEAQGGGEARRRAEALPWEEAGAGGPQVGVWSLLLLYPEYATSDFVAAVEETGMVAQVLAEVLPEEEEGREGGAAGWDMRGDYTCSRLEVYFQAVRTGAGKGEVLPSEEAYVEAVEDMYGRIGVGGGDYAKEGGEEGGREGGEEEKWGPPEAYWVHVHVGCRLLNVLQHPDYLLPATCPTLHVFARNSPAHSAFL 478
             +   + E + WS E+  AY   I +   +F + + + D  MVDA+ A+   G+ A+ LAL+ K+ GN++F  GKKN   Y   +  Y +A  Y   ALA P  P+       +E    D                   L++ I +NRA AHL LKNY SC+ D  RAL   P N+KA YR A+A   L +  + ++ C            + A+R+   R+ ++++      E +A ++ A+   +  +C  R +R+GR    +      E +        +E G  G     W +L LY EY  SDF+    E  M  + LA + PE     +G    WD R DY  S+L++Y  A        +V+P+ +   E        + + G    KE      +    +EK      +W  V   C+L  +L H +Y++P   P ++V  R S   ++FL
Sbjct:    2 SVELEIDESKVWSAEERQAYIDQIPE-MSLFEDHILDGD-VMVDAMMALVEEGETAETLALKYKNKGNKMFSDGKKNKNYYGYAIKEYTDAFTYGLKALAEPTDPDVLAKMDLDEPIVMDK------------------LMATILSNRAAAHLSLKNYGSCRSDAARALKYDPKNIKAIYRGAKASSLLKKPEDTLRYCSVGLTIDPTNKELLALRKDGDRILEEQRVQRELDEFKAKKKYAMTEKYRKLCTMRNIRVGRAVIDDARVKDFEGKA-----DLDEEGVMG-----WPVLFLYDEYGQSDFIQCFSEQDMFIEHLANMFPE-----DGPFCFWDKRQDYVASKLQIYVAA--------DVVPAFKLQEE------WHVALSG---VKELDSMETKRLDTDEKHEYKTKFWFLVSPFCKLFRLLTHREYVVPG-IPVVNVMVRGSKQEASFL 407          
BLAST of EWM21192.1 vs. NCBI_GenBank
Match: gi|1173932495|gb|OQR84459.1| (hypothetical protein ACHHYP_13362 [Achlya hypogyna])

HSP 1 Score: 154.066 bits (388), Expect = 4.376e-38
Identity = 141/461 (30.59%), Postives = 206/461 (44.69%), Query Frame = 0
Query:   36 GINQALAEGRGWSDEDVLAYAKTIGDNHPMFAETLEEMDPAMVDAIQAIKLGGKNAKQLALQAKSHGNELFGWGKK-NPAQYSNCLPSYDEAEKYALAVPLLPEPSQASGGEETPAQDARHGQEEEEDCLSKAEQAVLLSQIYANRAMAHLMLKNYRSCQQDCTRALARLPSNVKAHYRLARACFALGQYPEAIKACMAAV-------RRLKLRLNDQKKRALAQAERRAGRRKALRA-AWT-----MCQARGVRIGRPPWCEEAQGGGEARRRAEALPWEEAGAGGPQVGVWSLLLLYPEYATSDFVAAVEETGMVAQVLAEVLPEEEEGREGGAAGWDMRGDYTCSRLEVYFQAVRTGAGKGEVLP---SEEAYVEAVEDMYGRIGVGGGDYAKEG-GEEGGREGGEEEKWGPPEAYWVHVHVGCRLLNVLQHPDYLLPATCPTLHVFARNSPAHSAFL 478
             +   + E + WS E+  AY   I +   +F + + E D  MVDA+ A+   G+ A+ LAL+ K+ GN++F  GKK N   YS  L  Y +A  Y L     P          TPA++      +E   ++      L++ I  NRA AHL LKNY SC+ D  RAL   P N+KA YR A+A   L +  + ++ C   +         L LR++  +     + +R     KA +A A T     +C  RGVR+GR    +      E +          A      V  W +LLLY EY  SDF+ +  E  M  + LA + PE     EG    WD R DY  S+L VY           +V+P   + EA+          + + G   AKE    E  R   +E+    P+  W+ V   C+L  +L H  Y++P   P L+V  R S   ++FL
Sbjct:    2 SVELEIDESKVWSPEERQAYLDQIPE-MSLFEDHILEGD-VMVDAMMALVEEGETAETLALKFKNKGNKMFADGKKFNKNYYSYALKEYSDALAYGLKALASP----------TPAEELAKMDIDEPIVMT-----TLMATILTNRAAAHLALKNYGSCRSDAARALKYDPKNLKAIYRGAKASSLLKKPEDTLRYCAVGLAIDPNNKELLALRVDGDRILEEQRVQRELDAFKAKKAHAMTDKFRKLCALRGVRVGRGVLDDARVKDFEGK----------ADLDEEGVMCWPVLLLYDEYGQSDFIQSFGERDMFIEHLANMFPE-----EGPFCFWDQRHDYVASQLVVY--------AAADVVPAFSTPEAW---------HVALSG---AKESDAMESARLDADEKHEYKPKV-WLRVSPFCKLFQLLTHHQYVVPGI-PVLNVMVRGSKQEASFL 408          
BLAST of EWM21192.1 vs. NCBI_GenBank
Match: gi|301090414|ref|XP_002895422.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262098674|gb|EEY56726.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 147.132 bits (370), Expect = 1.386e-35
Identity = 142/459 (30.94%), Postives = 206/459 (44.88%), Query Frame = 0
Query:   36 GINQALAEGRGWSDEDVLAYAKTIGDNHPMFAETLEEMDPAMVDAIQAIKLGGKNAKQLALQAKSHGNELFGWGKK-NPAQYSNCLPSYDEAEKYALAVPLLPEPSQASGGEETPAQDARHGQEEEEDCLSKAEQAVLLSQIYANRAMAHLMLKNYRSCQQDCTRALARLPSNVKAHYRLARACFALGQYPEAIKACMAAVRR-----LKLRLNDQKKR--------ALAQAERRAGRRKALRAAWTMCQARGVRIGRPPWCEEAQGGGEARRRAEALPWEEAGAGGPQVG--VWSLLLLYPEYATSDFVAAVEETGMVAQVLAEVLPEEEEGREGGAAGWDMRGDYTCSRLEVYFQAVRTGAGKGEVLPSEEAYVEAVEDMYGRIGVGGGDYAKEGGEEGGREGGEEEKWGPPEAYWVHVHVGCRLLNVLQHPDYLLPATCPTLHVFARNSPAHSAFL 478
            G++  + E + W   +  AY   + D   +F + + E D  MV+AIQA+   G+ A+ LAL  K+ GN++F   KK +   + N +  Y++A  YA     LP+                    EE D     ++  L SQI  NRA   L LKNY SC+ D  +A+ R PSNVKA+YR A+A   L +  + ++ C   ++R     L L+L  + +R         L +   R  RR A      +C +RGVR+GR      A    E  R+     +E      PQ G   W +L LY ++ TSDFV    E   V + LA + PE     +G  A WD   ++  S+L VY       A    V+P    Y  + E     +G+ G    KE  +E       EEK      YW+ V   C L  +L H  Y++P   P L++F R S A   FL
Sbjct:    5 GVDLEIDESKLWDPAERQAYMDALPD-MTLFEDHVVEGDE-MVEAIQALIEDGETAESLALHWKNQGNDMFSDAKKAHRGYFKNAMKYYNDALAYAYKALALPD--------------------EERDLSYDMKE--LTSQILCNRAAVQLELKNYASCRSDAAKAINRDPSNVKAYYRGAKASRMLRKPVDTLRYCEEGLKRDPKNNLLLKLQVEGRRLVEELRVEKLKRERERMKRRAATDKYRKLCASRGVRVGR------AMVDDERVRQ-----YEGKADLDPQSGNMYWPVLFLYDQHGTSDFVQFFGEQDTVIEHLANMFPE-----DGPYADWDTNNEFVASKLVVY-------AAADMVVP----YSSSKE---WHVGLSG---EKEEDDEEVSRIRLEEKHEAKTQYWIEVAPFCTLQQLLTHEKYVVPGV-PVLNIFVRGSEALGNFL 405          
BLAST of EWM21192.1 vs. NCBI_GenBank
Match: gi|1210529947|dbj|GAX11480.1| (hypothetical protein FisN_22Lh165 [Fistulifera solaris])

HSP 1 Score: 143.28 bits (360), Expect = 1.580e-33
Identity = 128/502 (25.50%), Postives = 211/502 (42.03%), Query Frame = 0
Query:   35 GGINQALAEGRGWSDEDVLAYAKTIGDNH---PMFAETLEEMDPA-MVDAIQAIKLGGKNAKQLALQAKSHGNELFGWGKKNPAQ----YSNCLPSYDEAEKYALAVPLLPEPSQASGGEETPAQDARHGQEEEEDCLSKAEQAVLLSQIYANRAMAHLMLKNYRSCQQDCTRALARLPSNVKAHYRLARACFALGQY-----------------PEAIKACMAAVRRLKLRLNDQKKRALAQAERRAGRRKALRAAWTMCQARGVRIGRPP--------------WCEEAQGGGEARRRAEALPWEEAGAGGPQVGVWSLLLLYPEYATSDFVAAVEETGMVAQVLAEVLPEEEEGREGGAAGWDMRGDYTCSRLEVYFQAVRTGAG------KGEVLPSEEAYVEAVEDMYGRIGVGGGDYAKEGGEEGGREGGEEEK---------WG-PPEAYWVHVHVGCRLLNVLQHPDYLLPATCPTLHVFARNSPAHSAFLGEH 481
              I+ A+ +GRGW   +  AY + I D+    P+FA ++EE++ + + +A  ++   G+   +L L  +  GN+ F  GK+N  +    +   L  Y EA  +AL +  L E   A    + P  + +   +E              S+I  N A+ H+ LKN+   + +  +AL     NVKA YRLA+A   L ++                 P+ +K       R++     +++R  A+AER +     ++A W       + +G+ P              W       G   R+ +          G    VW  L LYP +  SDF+A   E+ M+A  LAEV PE EE        WD   ++TCS+L +YF+  +T           ++L ++   +   E      G  G D A        ++  E+ +         W  PP    V VH    L ++L+    ++P    TL++F    PAH+AF+ EH
Sbjct:   42 NAIDLAIQQGRGWGPGEKEAYLEKILDDDFIPPLFATSVEEVEKSGLQEAFTSLIYDGETPTRLMLSFRKKGNDAFQNGKRNQVKNLSYFRTALNHYYEAFAWALKIEPLHEGDYAVADTDDPTYNEQELNQER-------------SKICGNIALTHMQLKNWGFVRDESKKALQYDDQNVKAWYRLAKAYQQLQEWEAAGDALDKGLAVEPENPDLLKLQQLLAERIRKARKQRQQRERARAERVSK----VKAVWKHASTNKIALGKVPLVSSVEEDEEEETRWHHHMPHSGHLPRQLQ---------DGVDEWVWPCLFLYPSHQHSDFIAQFGESEMLAMRLAEVFPELEEDETETDMPWDHNNEFTCSQLAIYFEIHQTAHDDIIHPEHVQLLKTQGDTMRFYEASRALKGDEGDDIAAIVTAVARKQLHEQRQAWKKKHGSLWAVPPPNTVVRVHPALTLGDILRDERMVVPNFLVTLYIFPEQHPAHAAFIKEH 517          
BLAST of EWM21192.1 vs. NCBI_GenBank
Match: gi|1214712302|gb|OWZ23253.1| (hypothetical protein PHMEG_0001916 [Phytophthora megakarya])

HSP 1 Score: 141.354 bits (355), Expect = 1.661e-33
Identity = 139/457 (30.42%), Postives = 205/457 (44.86%), Query Frame = 0
Query:   36 GINQALAEGRGWSDEDVLAYAKTIGDNHPMFAETLEEMDPAMVDAIQAIKLGGKNAKQLALQAKSHGNELFGWGKK-NPAQYSNCLPSYDEAEKYALAVPLLPEPSQASGGEETPAQDARHGQEEEEDCLSKAEQAVLLSQIYANRAMAHLMLKNYRSCQQDCTRALARLPSNVKAHYRLARACFALGQYPEAIKACMAAVRR-----LKLRLNDQKKRAL-------AQAER-RAGRRKALRAAWTMCQARGVRIGRPPWCEEAQGGGEARRRAEALPWEEAGAGGPQVGVWSLLLLYPEYATSDFVAAVEETGMVAQVLAEVLPEEEEGREGGAAGWDMRGDYTCSRLEVYFQAVRTGAGKGEVLPSEEAYVEAVEDMYGRIGVGGGDYAKEGGEEGGREGGEEEKWGPPEAYWVHVHVGCRLLNVLQHPDYLLPATCPTLHVFARNSPAHSAFL 478
            G++  + E + W   +  AY   + D   +F + L E D  MV AIQA+   G+ A+ LAL  K+ GN++F   KK +   + N +  Y++A  YA     LP+                    EE D     ++  L SQI  NRA   L LKNY SC+ D  +A+   P+NVKA++R A+A   L +  + ++ C   ++R     L L+L  + +R +        Q ER R  RR A      +C AR +R+GR    +E     E   +A+  P  E+G+       W +L LY ++ TSDFV    E   V + LA + PE     +G  A WD   ++  S+L VY       A    VLP    Y    E     +G+ G     +   +  R    EEK      YW+ V   C L  +L H  Y++P   P L++F R S A   FL
Sbjct:    3 GVDLEIDESKLWDPAERQAYMDALPD-MTLFEDHLVEGD-EMVAAIQALIEDGETAESLALHWKNQGNDMFSDAKKAHRGYFQNAMKYYNDALAYAYKALALPD--------------------EERDLSYDMKE--LTSQILCNRAAVQLELKNYASCRSDAAKAINFDPTNVKAYFRGAKASRMLRKPADTLRYCDEGLKRDPENKLLLKLQTEGRRLVEELRVEKLQRERERMKRRAATDKYRKLCAARNIRVGRALVDDERVRQYEG--KADLDP--ESGS-----MYWPVLFLYDQHGTSDFVQFFGEQDQVIEHLANMFPE-----DGPYAEWDTNKEFVASKLVVY-------AAADMVLP----YSSPKE---WHVGLSGEKEEDDEEVKRIR---LEEKHEAKTQYWIEVAPFCTLQQLLTHEKYVVPG-IPVLNIFVRGSEALGNFL 403          
BLAST of EWM21192.1 vs. NCBI_GenBank
Match: gi|669158008|ref|XP_008614566.1| (hypothetical protein SDRG_10358 [Saprolegnia diclina VS20] >gi|530733922|gb|EQC32164.1| hypothetical protein SDRG_10358 [Saprolegnia diclina VS20])

HSP 1 Score: 140.969 bits (354), Expect = 2.261e-33
Identity = 131/456 (28.73%), Postives = 202/456 (44.30%), Query Frame = 0
Query:   41 LAEGRGWSDEDVLAYAKTIGDNHPMFAETLEEMDPAMVDAIQAIKLGGKNAKQLALQAKSHGNELFGWGKK--NPAQYSNCLPSYDEAEKYALAVPLLPEPSQASGGEETPAQDARHGQEEEEDCLSKAEQAVLLSQIYANRAMAHLMLKNYRSCQQDCTRALARLPSNVKAHYRLARACFALGQYPEAIKAC------------MAAVRRLKLRLNDQKKRALAQAERRAGRRKALRAAW----TMCQARGVRIGRPPWCEEAQGGGEARRRAEALPWEEAGAGGPQVGVWSLLLLYPEYATSDFVAAVEETGMVAQVLAEVLPEEEEGREGGAAGWDMRGDYTCSRLEVYFQAVRTGAGKGEVLPSEEAYVEAVEDMYGRIGVGGGDYAKEGGEEGGREGGEEEKWGPPEAYWVHVHVGCRLLNVLQHPDYLLPATCPTLHVFARNSPAHSAFL 478
            + E + WS E+  AY   I +   +F + + E D  MVDA+ A+   G+ A+ LAL+ K+ GN++F   KK  N   Y   +  Y +A  Y L     P P+     +E  A D      +E   +S      L++ I +NRA AHL LKNY SC+ D  RAL     ++K+ YR A+A   L +  + ++ C            +  ++R   ++ D+++    QAE  A + K  +A       +C  R +R+GR    +      E +          A      V  W +LLLY EY  SDF+ +  E  M  + LA + PE     EG    WD R DY  S+L+VY  A         V+P       A +D +  + + G   AKE           +EK       W+ V   C+L  +L H  Y++P   P +++  R S   ++FL
Sbjct:    7 IDESKVWSPEERQAYLDQIPE-MSLFEDHILEGD-VMVDAMMALVEEGETAETLALKFKNKGNKMFADAKKSMNALYYEYAIKEYSDALGYGLKALAAPTPA-----DELAAMDL-----DEPIVMS-----TLMTTILSNRAAAHLSLKNYGSCRSDAARALQHDSKHLKSIYRGAKASAMLKKPVDTLRYCKVGLALDPSNKELLVLQRDGEKMLDEQR---VQAELDAFKAKKAQAMVEKYRKLCTLRKIRVGRGILDDARVKDFEGK----------ADLDEEGVMCWPVLLLYDEYGQSDFIQSFGEQDMFIEHLANMFPE-----EGPFCFWDKRHDYVASQLQVYVAA-------DVVVPF------ATQDAW-HVALSG---AKESDAVESARLDADEKHSYKHKVWLRVSPFCKLYRLLSHHQYVVPGI-PVINIMVRGSKQEASFL 409          
BLAST of EWM21192.1 vs. NCBI_GenBank
Match: gi|813149699|ref|XP_012200496.1| (hypothetical protein SPRG_19963 [Saprolegnia parasitica CBS 223.65] >gi|641534819|gb|KDO28749.1| hypothetical protein SPRG_19963 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 139.813 bits (351), Expect = 7.142e-33
Identity = 132/453 (29.14%), Postives = 194/453 (42.83%), Query Frame = 0
Query:   41 LAEGRGWSDEDVLAYAKTIGDNHPMFAETLEEMDPAMVDAIQAIKLGGKNAKQLALQAKSHGNELFGWGKK--NPAQYSNCLPSYDEAEKYALAVPLLPEPSQASGGEETPAQDARHGQEEEEDCLSKAEQAVLLSQIYANRAMAHLMLKNYRSCQQDCTRALARLPSNVKAHYRLARACFALGQYPEAIKAC-----MAAVRRLKLRLNDQKKRAL----AQAERRAGRRKALRAAW----TMCQARGVRIGRPPWCEEAQGGGEARRRAEALPWEEAGAGGPQVGVWSLLLLYPEYATSDFVAAVEETGMVAQVLAEVLPEEEEGREGGAAGWDMRGDYTCSRLEVYFQAVRTGAGKGEVLPSEEAYVEAVEDMYGRIGVGGGDYAKEGGEEGGREGGEEEKWGPPEAYWVHVHVGCRLLNVLQHPDYLLPATCPTLHVFARNSPAHSAFL 478
            + E + WS E+  AY   I +   +F + + E D  MVDA+ A+   G+ A+ LAL+ K+ GN++F   KK  N   Y   +  Y +A  Y L     P P+     +E  A D                   L++ I +NRA AHL LKNY SC+ D  RAL     ++K+ YR A+A   L +  + ++ C     + A  +  L L    ++ L     QAE  A + K   A       +C  R VR+GR    +      E +          A      V  W +L LY EY  SDF+ +  E  M  + LA + PE     EG    WD R DY  S+L+VY  A         V+P       A  D +  + + G   AKE           +EK G     W+ V   C+L  +L H  Y++P   P +++  R S   ++FL
Sbjct:    7 IDESKVWSPEERQAYLDQIPE-MSLFEDHILEGD-VMVDAMMALVEEGETAETLALKFKNKGNKMFADAKKSKNHLYYEYAIKEYSDALAYGLKALAAPTPA-----DELAAMDLD----------EPIRMPALMTTILSNRAAAHLALKNYGSCRSDAARALQHDSKHLKSIYRGAKASAMLKKPADTLRYCKVGLAIDATNKELLVLQRDGEKMLEEQRQQAELDAFKAKKAHAMVEKYRKLCTLRNVRVGRGILDDARVKDFEGK----------ADLDEEGVMCWPVLFLYDEYGQSDFIQSFGEQDMFIEHLANMFPE-----EGPFCFWDKRQDYVASQLQVYVAA-------DVVVPF------ATPDAW-HVALNG---AKESDAIESARLDADEKHGYKHKVWLRVSPFCKLYRLLSHHQYVVPGI-PVINIMVRGSKQEASFL 409          
The following BLAST results are available for this feature:
BLAST of EWM21192.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101276|gb|EWM21192.1|0.000e+0100.00tetratricopeptide repeat containing protein 4 [Nan... [more]
gi|553188512|ref|XP_005854810.1|0.000e+079.40tpr repeat protein [Nannochloropsis gaditana CCMP5... [more]
gi|298706331|emb|CBJ29346.1|1.796e-4629.70conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173958936|gb|OQS05226.1|1.990e-3927.89hypothetical protein THRCLA_20685 [Thraustotheca c... [more]
gi|1173932495|gb|OQR84459.1|4.376e-3830.59hypothetical protein ACHHYP_13362 [Achlya hypogyna... [more]
gi|301090414|ref|XP_002895422.1|1.386e-3530.94conserved hypothetical protein [Phytophthora infes... [more]
gi|1210529947|dbj|GAX11480.1|1.580e-3325.50hypothetical protein FisN_22Lh165 [Fistulifera sol... [more]
gi|1214712302|gb|OWZ23253.1|1.661e-3330.42hypothetical protein PHMEG_0001916 [Phytophthora m... [more]
gi|669158008|ref|XP_008614566.1|2.261e-3328.73hypothetical protein SDRG_10358 [Saprolegnia dicli... [more]
gi|813149699|ref|XP_012200496.1|7.142e-3329.14hypothetical protein SPRG_19963 [Saprolegnia paras... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9510rna9510Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications