rna951, rna951 (mRNA) Nannochloropsis gaditana

Overview
Namerna951
Unique Namerna951
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length432
Alignment locationCM002456.1:812430..813140 -

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Properties
Property NameValue
Productnuclear cap-binding protein subunit 2
Orig transcript idgnl|cribi|Naga_100022g67.843.mrna
Orig protein idgnl|cribi|Naga_100022g67.843
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:812430..813140 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100022g67gene914Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna951rna951-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29744.1cds951Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna951 ID=rna951|Name=rna951|organism=Nannochloropsis gaditana|type=mRNA|length=432bp
ATGAGTAGGTCGAATATAGCATATACTTCAACCACCAATGCGCGTTGGAT
GCGGTTGCCTTTTTGCATGGCACAACATTGGATGATCGCATCATCCGTGT
GGAACTTGATTGGGGGTATCATCCTTCTCGACGTTATGGACGAGGAGAGA
GTGGGGGTCAAGTCCGCGATGAAAAACGCATGGATTACGATGAGGGTCGT
GGCGGATATGGCAGAGCGGCCATGTACCATTCTGTGCCGGACCCAAGTGC
GGAAGCGCCTCAGGTGGCGAACCCAGTATCCAGCAGGCGGCAACAGCGCC
CCGGAGTGGTATGATCGAAAGCAGGTTCATTACCAGGTTTTTTGCACGAA
GAATTCAAAACGTGTACCGTGTGATTTGAAATGTTCCATTGCCGTTCCTT
TTGTTCCTTCTAGAGCGTTTCAATACATATGA
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protein sequence of rna951

>rna951-protein ID=rna951-protein|Name=rna951|organism=Nannochloropsis gaditana|type=polypeptide|length=123bp
MRVERGYQSGCVFINYCRFLKAIVMAELFDTDPQPLVYWDRKQFTHFQDQ
IKSLRGTKVVYIGNLSFQTTEPQIYQAFSKIGIIKRVIMGLNRFTKEPCG
FCFIEWVAFFIFFFELGILLSRY
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mRNA from alignment at CM002456.1:812430..813140-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna951 ID=rna951|Name=rna951|organism=Nannochloropsis gaditana|type=mRNA|length=711bp|location=Sequence derived from alignment at CM002456.1:812430..813140- (Nannochloropsis gaditana)
ATGAGAGTAGAAAGAGGTTACCAATCTGGATGGTACGGGCTCAGAGGCTT
GTTTGCCTAAGCAATAAGGTTGCATCGCATTACTTGTGGCCCTTGTATGT
TTTTTAAAGGAAGTGTGAAGTTTATGTAAGAGATGAGGGGTAATTTTCAA
ACCAGAAGAGCTTTTGAAGTCGCGAACACCGCTCCTGCAATGTCTGATAA
CCTGACGTGTTTTAACTTGCAAAAGTGTTTTTATCAACTACTGTAGGTTT
CTGAAAGCAATTGTTATGGCGGAACTCTTCGACACTGATCCTCAACCTTT
GGTGTATTGGGACCGTAAACAGTTCACTCATTTCCAAGACCAGGTGTGTG
GAGGAATTCAATCATCATTTGAACAACATTGTAAAGATTTTAAATCGGAC
GCCTGCCCGTACCTAGATCAAGTCACTACGGGGAACTAAAGTGGTGTACA
TCGGGAACCTCAGTTTTCAAACAACTGAACCTCAAATTTATCAGGCCTTC
TCTAAGGTGAGAAAATCTGCGCCGTGCATGACACTTGATGAGAGCATCAT
ATCTGACACCTTGTCCCTGTTCCCAATAGATCGGCATAATCAAGCGTGTT
ATCATGGGGCTTAACCGATTCACGAAAGAGCCGTGCGGTTTCTGCTTTAT
TGAGTGGGTAGCATTTTTCATTTTCTTTTTCGAGTTGGGAATATTACTTT
CGCGTTATTGA
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Coding sequence (CDS) from alignment at CM002456.1:812430..813140-

>rna951 ID=rna951|Name=rna951|organism=Nannochloropsis gaditana|type=CDS|length=1488bp|location=Sequence derived from alignment at CM002456.1:812430..813140- (Nannochloropsis gaditana)
ATCGGCATAATCAAGCGTGTTATCATGGGGCTTAACCGATTCACGAAAGA
GCCGTGCGGTTTCTGCTTTATTGAGTGGGTAGCATTTTTCATTTTCTTTT
TCGAGTTGGGAATATTACTTTCGCGTTATTGAATCAAGTCACTACGGGGA
ACTAAAGTGGTGTACATCGGGAACCTCAGTTTTCAAACAACTGAACCTCA
AATTTATCAGGCCTTCTCTAAGTGTTTTTATCAACTACTGTAGGTTTCTG
AAAGCAATTGTTATGGCGGAACTCTTCGACACTGATCCTCAACCTTTGGT
GTATTGGGACCGTAAACAGTTCACTCATTTCCAAGACCAGATGAGAGTAG
AAAGAGGTTACCAATCTGGATGATCGGCATAATCAAGCGTGTTATCATGG
GGCTTAACCGATTCACGAAAGAGCCGTGCGGTTTCTGCTTTATTGAGTGG
GTAGCATTTTTCATTTTCTTTTTCGAGTTGGGAATATTACTTTCGCGTTA
TTGAATCAAGTCACTACGGGGAACTAAAGTGGTGTACATCGGGAACCTCA
GTTTTCAAACAACTGAACCTCAAATTTATCAGGCCTTCTCTAAGTGTTTT
TATCAACTACTGTAGGTTTCTGAAAGCAATTGTTATGGCGGAACTCTTCG
ACACTGATCCTCAACCTTTGGTGTATTGGGACCGTAAACAGTTCACTCAT
TTCCAAGACCAGATGAGAGTAGAAAGAGGTTACCAATCTGGATGATCGGC
ATAATCAAGCGTGTTATCATGGGGCTTAACCGATTCACGAAAGAGCCGTG
CGGTTTCTGCTTTATTGAGTGGGTAGCATTTTTCATTTTCTTTTTCGAGT
TGGGAATATTACTTTCGCGTTATTGAATCAAGTCACTACGGGGAACTAAA
GTGGTGTACATCGGGAACCTCAGTTTTCAAACAACTGAACCTCAAATTTA
TCAGGCCTTCTCTAAGTGTTTTTATCAACTACTGTAGGTTTCTGAAAGCA
ATTGTTATGGCGGAACTCTTCGACACTGATCCTCAACCTTTGGTGTATTG
GGACCGTAAACAGTTCACTCATTTCCAAGACCAGATGAGAGTAGAAAGAG
GTTACCAATCTGGATGATCGGCATAATCAAGCGTGTTATCATGGGGCTTA
ACCGATTCACGAAAGAGCCGTGCGGTTTCTGCTTTATTGAGTGGGTAGCA
TTTTTCATTTTCTTTTTCGAGTTGGGAATATTACTTTCGCGTTATTGAAT
CAAGTCACTACGGGGAACTAAAGTGGTGTACATCGGGAACCTCAGTTTTC
AAACAACTGAACCTCAAATTTATCAGGCCTTCTCTAAGTGTTTTTATCAA
CTACTGTAGGTTTCTGAAAGCAATTGTTATGGCGGAACTCTTCGACACTG
ATCCTCAACCTTTGGTGTATTGGGACCGTAAACAGTTCACTCATTTCCAA
GACCAGATGAGAGTAGAAAGAGGTTACCAATCTGGATG
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Synonyms
Publications