rna9505, rna9505 (mRNA) Nannochloropsis gaditana

Overview
Namerna9505
Unique Namerna9505
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1151
Alignment locationKK037254.1:17507..18334 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102488g1.2219.mrna
Orig protein idgnl|cribi|Naga_102488g1.2219
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:17507..18334 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102488g1gene9226Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9505rna9505-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21199.1cds9474Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9505 ID=rna9505|Name=rna9505|organism=Nannochloropsis gaditana|type=mRNA|length=1151bp
CCCAATCCGTCTCTCTCTCCGTCTATTCTTCCTACTTTCCACCGTCCTCG
AGCCTCCGTCTCCTCCTCCTCCTCCTCCTCCTCCTCGCCCTCAGCAAAGT
TCAACCGACGCGCTCCTACTTCCTCTCGTTCCCCTTCCAATCTCATCACC
TCCCTCCGCCGTCCCGCTCATTGCGTGCGAGGAGCGTCTGCCCGCAAGCT
TTCGCATGAAGGTGGCTCCAGTCGAGAGGAGAGGGTCATCCTGAGTGGCC
TCATGAAGCGGACGATGGGTTGGGAAGTGGATGATGCGGGGGGAGGAGAC
GGGAGCTACGAGGATGACCTCCCGTGGGAGGTGCGGGGAAGTGAGGAAGA
AGGGGATGCGGAGGAGGAGGAGGAGGAAGAGGAGGGGGAGGAGGAGGAGG
AGGACGAGGAGGGGGAACTGTCAGATTTCATTGCTTCGGAAGACGAGGAG
GAGGAGGAGGGGGAGGGAGGGAAAGAGGGAGGGCGGCCATGGATGCACGA
CGGGGTGCGATGCCTCTGTGGGGCGCGGGCGTTCGGCCGTGGTCAGGAGG
GGAGGGAAGGGGGGAGGGAGAGAGGGAGGGATGGAGGGATAAAGGTGCAG
TGCACGAACGAGGAGTGTGCCTATTGGGGGCACGGTTCCTGTTACGGGAT
TGAGGAGGAGGAGGAGGTGCCGTTGGACTTCAAATGCTATCACTGCCGTC
CTTCCCCCCGACAGGGCGGGCGCGAAGACGTGCCCGCCGCGGTGATGGGG
AAGGACGGGAGGTTGATGGACTTGTATCGGCTGTTGCAGGCGGGGGTGTC
GAGGGAGGCGTTTGGGAAAGCCTTGAGGCGGGTGAGGAGGCGGGAGGGAG
GAAGGGAGGGAGGGAGGGGTCCCTGGTGGGAAATACCGGCGCAGTACCGT
GCGAGTGGGCACACGGTCTTGATGGAGGCAGCCGCCTTGGGGCGAGTGGA
GGAGGTGCGGCTCCTGACCGAAGCGGAGAGGGAGGAGGAGGGAGGAGGGA
GGAGGAGGAGGGGGGGGGGAGAAAGGGATTGGTAGGTTCGGTGGATGCGG
AGGGGCGGACGGCGGCGCATCATGCGCTGAAAAAATCTCGACGTGCAAGA
GGAGGTGGTGGTGGAGGTGTTGAAAGGGTTGATGGATTCGGACGGAGGAG
G
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protein sequence of rna9505

>rna9505-protein ID=rna9505-protein|Name=rna9505|organism=Nannochloropsis gaditana|type=polypeptide|length=169bp
LLAEILDWDPVLHRSLSCVLATEKAEHLGLSFTHSRPVWVQKGTDPGTRV
VAVEETPLCEGGEVREVTDANKEEFVVRLLHAHFQAYLPAARALRRGLLD
VLRPSNGRLLKIYTAMELATLSGGVSDLPVSEWRTHTTLSSALLHLSSSP
PSGPPSPPSASRRGTDRRC
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mRNA from alignment at KK037254.1:17507..18334+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9505 ID=rna9505|Name=rna9505|organism=Nannochloropsis gaditana|type=mRNA|length=828bp|location=Sequence derived from alignment at KK037254.1:17507..18334+ (Nannochloropsis gaditana)
CCTCCTGGCGGAGATCCTTGACTGGgatcctgtcctccaccgctcGCTGA
GTTGTGTGCTCGCCACGGAAAAGGCCGAGCATCTCGGCCTTTCCTTCACC
CACAGCCGCCCGGTCTGGGTCCAGAAAGGGACCGACCCAGGCACGAGGGT
AGTGGCAGTGGAAGAGACGCCGCTCtgtgaggggggggaggttcggGAGG
TTACGGATGCGAACAAGGAGGAATTCGtcgttcgcctcctccacgcccat
tTCCAGGCCTacctccctgccgcccggGCATTGCGGCGGGGGCTCTTGGA
TGTGCTGCGGCCCAGCAACGGGCGTCTGTTGAAGATATACACGGCCATGG
AGCTCGCCACATTGAGCGGAGGGGTCTCCGACCTGCCCGTCTCCGAATGG
CGAACGCAtaccaccctctcctccgccctcctccacctgtcctcctcccc
gccctccggccctccctcccccccgtcggCTTCCCGACGCGGCACGGACA
GAAGGTGCTGAGCTGGTTCTGGGCCTTCCTGGAAACGCTCTCCAAAGAAG
ATAAAGCCCTCCTTCTAAAATTCGCCACCGGCCTCTCCCGTCTGCCCGTG
GGGGGGTTCTctgccctccaacccccctTCACCTTGCAGCCGCTGGCATT
CGATTCGGCGCGACCGTTACCGATCGCCGCCACCTGTTTCCACGTCTTGA
AGCTGCCCTTGTATCCAACGGCGGAGGACTTGGAGAAACATGTCCTGCTT
GCCCTCCGGTTTGGGAGTGAAGGCTTTGCATTTGCATGAAGGGTaacaac
ccctccctccctccctccctccctccct
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Coding sequence (CDS) from alignment at KK037254.1:17507..18334+

>rna9505 ID=rna9505|Name=rna9505|organism=Nannochloropsis gaditana|type=CDS|length=510bp|location=Sequence derived from alignment at KK037254.1:17507..18334+ (Nannochloropsis gaditana)
CTCCTGGCGGAGATCCTTGACTGGgatcctgtcctccaccgctcGCTGAG
TTGTGTGCTCGCCACGGAAAAGGCCGAGCATCTCGGCCTTTCCTTCACCC
ACAGCCGCCCGGTCTGGGTCCAGAAAGGGACCGACCCAGGCACGAGGGTA
GTGGCAGTGGAAGAGACGCCGCTCtgtgaggggggggaggttcggGAGGT
TACGGATGCGAACAAGGAGGAATTCGtcgttcgcctcctccacgcccatt
TCCAGGCCTacctccctgccgcccggGCATTGCGGCGGGGGCTCTTGGAT
GTGCTGCGGCCCAGCAACGGGCGTCTGTTGAAGATATACACGGCCATGGA
GCTCGCCACATTGAGCGGAGGGGTCTCCGACCTGCCCGTCTCCGAATGGC
GAACGCAtaccaccctctcctccgccctcctccacctgtcctcctccccg
ccctccggccctccctcccccccgtcggCTTCCCGACGCGGCACGGACAG
AAGGTGCTGA
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Synonyms
Publications