EWM21199.1, cds9474 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21199.1 vs. NCBI_GenBank
Match: gi|585101287|gb|EWM21199.1| (hypothetical protein Naga_102488g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 338.576 bits (867), Expect = 1.094e-117 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 Query: 1 LLAEILDWDPVLHRSLSCVLATEKAEHLGLSFTHSRPVWVQKGTDPGTRVVAVEETPLCEGGEVREVTDANKEEFVVRLLHAHFQAYLPAARALRRGLLDVLRPSNGRLLKIYTAMELATLSGGVSDLPVSEWRTHTTLSSALLHLSSSPPSGPPSPPSASRRGTDRRC 169 LLAEILDWDPVLHRSLSCVLATEKAEHLGLSFTHSRPVWVQKGTDPGTRVVAVEETPLCEGGEVREVTDANKEEFVVRLLHAHFQAYLPAARALRRGLLDVLRPSNGRLLKIYTAMELATLSGGVSDLPVSEWRTHTTLSSALLHLSSSPPSGPPSPPSASRRGTDRRC Sbjct: 1 LLAEILDWDPVLHRSLSCVLATEKAEHLGLSFTHSRPVWVQKGTDPGTRVVAVEETPLCEGGEVREVTDANKEEFVVRLLHAHFQAYLPAARALRRGLLDVLRPSNGRLLKIYTAMELATLSGGVSDLPVSEWRTHTTLSSALLHLSSSPPSGPPSPPSASRRGTDRRC 169
BLAST of EWM21199.1 vs. NCBI_GenBank
Match: gi|1173951490|gb|OQR99364.1| (HECT E3 ubiquitin ligase [Achlya hypogyna]) HSP 1 Score: 72.7886 bits (177), Expect = 6.210e-12 Identity = 51/143 (35.66%), Postives = 75/143 (52.45%), Query Frame = 0 Query: 2 LAEILDWDPVLHRSLSCVLATEKAEHLGLSFTHSRPVWVQKGTDPGTRVVAVEETPLCEGGEVREVTDANKEEFVVRLL-HAHFQAYLPAARALRRGLLDVLRPSNGRLLKIYTAMELATLSGGVSDLPVSEWRTHTTLSSAL 143 + +I D L++SL +LATE AE L L+F+ S R VEE L E G+ VTDANK ++V RL+ + F+ P RAL +GL ++ P LL + E L G++++ VS+W +T +SS L Sbjct: 452 MDDIESLDKTLYKSLRYLLATENAEDLALTFSVSE-----------LRGTTVEEVDLVENGQDIAVTDANKHDYVERLVRYLLFERIQPQLRALMQGLYAIIPP---ELLVPFDHKEFELLVTGLAEIDVSDWEANTDVSSNL 580
BLAST of EWM21199.1 vs. NCBI_GenBank
Match: gi|301111246|ref|XP_002904702.1| (HECT E3 ubiquitin ligase, putative [Phytophthora infestans T30-4] >gi|262095032|gb|EEY53084.1| HECT E3 ubiquitin ligase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 63.1586 bits (152), Expect = 1.371e-8 Identity = 55/156 (35.26%), Postives = 72/156 (46.15%), Query Frame = 0 Query: 9 DPVLHRSLSCVLATEKAEHLGLSFTHSRPVWVQKGTDPGTRVVAVEETPLCEGGEVREVTDANKEEFVVRLL-HAHFQAYLPAARALRRGLLDVLRPSNGRLLKIYTAMELATLSGGVSDLPVSEWRTHTTLSSALLHLSSSPPSGPPSPPSASRR 163 D LHR + E AE L L FT R +G D + EE L GG+ VTDANKEE++ LL H F A AL +GL DVL + LL ++ EL L GV + V++W +HT + GP P +A R+ Sbjct: 420 DAELHRHALWLRDNEGAEALALDFTAQR-----QGNDGS---IITEE--LKAGGKDIPVTDANKEEYLTLLLKHKMFGAVREQLEALLQGLYDVLPRT---LLAVFDYQELELLVCGVPSIDVADWESHTDVRYM------RAEQGPNKPAAAERQ 556
BLAST of EWM21199.1 vs. NCBI_GenBank
Match: gi|570985536|gb|ETP44797.1| (hypothetical protein F442_08675 [Phytophthora parasitica P10297]) HSP 1 Score: 60.077 bits (144), Expect = 1.681e-7 Identity = 48/132 (36.36%), Postives = 65/132 (49.24%), Query Frame = 0 Query: 9 DPVLHRSLSCVLATEKAEHLGLSFTHSRPVWVQKGTDPGTRVVAVEETPLCEGGEVREVTDANKEEFVVRLL-HAHFQAYLPAARALRRGLLDVLRPSNGRLLKIYTAMELATLSGGVSDLPVSEWRTHTTL 139 D LHR + E E L L FT R +GTD ++ E P GG+ VTDANKEE++ LL H F A A+ +GL DVL + LL ++ EL L GV + V++W +HT + Sbjct: 537 DAELHRHALWLRENEGVEALALDFTAQR-----QGTDGA--IITEELKP---GGKDIPVTDANKEEYLTLLLKHKMFGAVREQLEAMLQGLYDVLPRT---LLAVFDYQELELLVCGVPSIDVADWESHTDV 655
BLAST of EWM21199.1 vs. NCBI_GenBank
Match: gi|566024023|gb|ETI46934.1| (hypothetical protein F443_08741 [Phytophthora parasitica P1569]) HSP 1 Score: 60.077 bits (144), Expect = 1.697e-7 Identity = 48/132 (36.36%), Postives = 65/132 (49.24%), Query Frame = 0 Query: 9 DPVLHRSLSCVLATEKAEHLGLSFTHSRPVWVQKGTDPGTRVVAVEETPLCEGGEVREVTDANKEEFVVRLL-HAHFQAYLPAARALRRGLLDVLRPSNGRLLKIYTAMELATLSGGVSDLPVSEWRTHTTL 139 D LHR + E E L L FT R +GTD ++ E P GG+ VTDANKEE++ LL H F A A+ +GL DVL + LL ++ EL L GV + V++W +HT + Sbjct: 537 DAELHRHALWLRENEGVEALALDFTAQR-----QGTDGA--IITEELKP---GGKDIPVTDANKEEYLTLLLKHKMFGAVREQLEAMLQGLYDVLPRT---LLAVFDYQELELLVCGVPSIDVADWESHTDV 655
BLAST of EWM21199.1 vs. NCBI_GenBank
Match: gi|567961334|gb|ETK86879.1| (hypothetical protein L915_08569 [Phytophthora parasitica]) HSP 1 Score: 60.077 bits (144), Expect = 1.714e-7 Identity = 48/132 (36.36%), Postives = 65/132 (49.24%), Query Frame = 0 Query: 9 DPVLHRSLSCVLATEKAEHLGLSFTHSRPVWVQKGTDPGTRVVAVEETPLCEGGEVREVTDANKEEFVVRLL-HAHFQAYLPAARALRRGLLDVLRPSNGRLLKIYTAMELATLSGGVSDLPVSEWRTHTTL 139 D LHR + E E L L FT R +GTD ++ E P GG+ VTDANKEE++ LL H F A A+ +GL DVL + LL ++ EL L GV + V++W +HT + Sbjct: 537 DAELHRHALWLRENEGVEALALDFTAQR-----QGTDGA--IITEELKP---GGKDIPVTDANKEEYLTLLLKHKMFGAVREQLEAMLQGLYDVLPRT---LLAVFDYQELELLVCGVPSIDVADWESHTDV 655
BLAST of EWM21199.1 vs. NCBI_GenBank
Match: gi|567990055|gb|ETL40292.1| (hypothetical protein L916_08499 [Phytophthora parasitica] >gi|570951477|gb|ETP16734.1| hypothetical protein F441_08718 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 60.077 bits (144), Expect = 1.730e-7 Identity = 48/132 (36.36%), Postives = 65/132 (49.24%), Query Frame = 0 Query: 9 DPVLHRSLSCVLATEKAEHLGLSFTHSRPVWVQKGTDPGTRVVAVEETPLCEGGEVREVTDANKEEFVVRLL-HAHFQAYLPAARALRRGLLDVLRPSNGRLLKIYTAMELATLSGGVSDLPVSEWRTHTTL 139 D LHR + E E L L FT R +GTD ++ E P GG+ VTDANKEE++ LL H F A A+ +GL DVL + LL ++ EL L GV + V++W +HT + Sbjct: 537 DAELHRHALWLRENEGVEALALDFTAQR-----QGTDGA--IITEELKP---GGKDIPVTDANKEEYLTLLLKHKMFGAVREQLEAMLQGLYDVLPRT---LLAVFDYQELELLVCGVPSIDVADWESHTDV 655
BLAST of EWM21199.1 vs. NCBI_GenBank
Match: gi|566024024|gb|ETI46935.1| (hypothetical protein, variant [Phytophthora parasitica P1569]) HSP 1 Score: 60.077 bits (144), Expect = 1.741e-7 Identity = 48/132 (36.36%), Postives = 65/132 (49.24%), Query Frame = 0 Query: 9 DPVLHRSLSCVLATEKAEHLGLSFTHSRPVWVQKGTDPGTRVVAVEETPLCEGGEVREVTDANKEEFVVRLL-HAHFQAYLPAARALRRGLLDVLRPSNGRLLKIYTAMELATLSGGVSDLPVSEWRTHTTL 139 D LHR + E E L L FT R +GTD ++ E P GG+ VTDANKEE++ LL H F A A+ +GL DVL + LL ++ EL L GV + V++W +HT + Sbjct: 404 DAELHRHALWLRENEGVEALALDFTAQR-----QGTDGA--IITEELKP---GGKDIPVTDANKEEYLTLLLKHKMFGAVREQLEAMLQGLYDVLPRT---LLAVFDYQELELLVCGVPSIDVADWESHTDV 522
BLAST of EWM21199.1 vs. NCBI_GenBank
Match: gi|567961335|gb|ETK86880.1| (hypothetical protein, variant [Phytophthora parasitica] >gi|570985537|gb|ETP44798.1| hypothetical protein, variant [Phytophthora parasitica P10297]) HSP 1 Score: 60.077 bits (144), Expect = 1.758e-7 Identity = 48/132 (36.36%), Postives = 65/132 (49.24%), Query Frame = 0 Query: 9 DPVLHRSLSCVLATEKAEHLGLSFTHSRPVWVQKGTDPGTRVVAVEETPLCEGGEVREVTDANKEEFVVRLL-HAHFQAYLPAARALRRGLLDVLRPSNGRLLKIYTAMELATLSGGVSDLPVSEWRTHTTL 139 D LHR + E E L L FT R +GTD ++ E P GG+ VTDANKEE++ LL H F A A+ +GL DVL + LL ++ EL L GV + V++W +HT + Sbjct: 404 DAELHRHALWLRENEGVEALALDFTAQR-----QGTDGA--IITEELKP---GGKDIPVTDANKEEYLTLLLKHKMFGAVREQLEAMLQGLYDVLPRT---LLAVFDYQELELLVCGVPSIDVADWESHTDV 522
BLAST of EWM21199.1 vs. NCBI_GenBank
Match: gi|567990056|gb|ETL40293.1| (hypothetical protein, variant [Phytophthora parasitica] >gi|570951478|gb|ETP16735.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1]) HSP 1 Score: 60.077 bits (144), Expect = 1.844e-7 Identity = 48/132 (36.36%), Postives = 65/132 (49.24%), Query Frame = 0 Query: 9 DPVLHRSLSCVLATEKAEHLGLSFTHSRPVWVQKGTDPGTRVVAVEETPLCEGGEVREVTDANKEEFVVRLL-HAHFQAYLPAARALRRGLLDVLRPSNGRLLKIYTAMELATLSGGVSDLPVSEWRTHTTL 139 D LHR + E E L L FT R +GTD ++ E P GG+ VTDANKEE++ LL H F A A+ +GL DVL + LL ++ EL L GV + V++W +HT + Sbjct: 404 DAELHRHALWLRENEGVEALALDFTAQR-----QGTDGA--IITEELKP---GGKDIPVTDANKEEYLTLLLKHKMFGAVREQLEAMLQGLYDVLPRT---LLAVFDYQELELLVCGVPSIDVADWESHTDV 522 The following BLAST results are available for this feature:
BLAST of EWM21199.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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