rna9502, rna9502 (mRNA) Nannochloropsis gaditana

Overview
Namerna9502
Unique Namerna9502
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1513
Alignment locationKK037254.1:11496..11764 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101229g3.10041.mrna
Orig protein idgnl|cribi|Naga_101229g3.10041
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:11496..11764 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101229g3gene9223Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9502rna9502-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21203.1cds9471Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9502 ID=rna9502|Name=rna9502|organism=Nannochloropsis gaditana|type=mRNA|length=1513bp
CATTACTTTTTCTCAGAAACATCTGAATACTTATCAATCAAAAGCGCTTT
CTTGTCACGACGACTTGTTTCGGCAAGATCCGCTGCTCCCATGGGCCAGA
CTGCCAGGATCGTGGTCAACAAGCAAAAAACGTGCCCACACACAGAAAAC
TCGGGGGGAGGAAACACATGCCACGATGATATTCTTGTTGTTTTTTTTGT
CAACCATGGCATTTACTGCGTGTATGGGCGGTCGGTGGGGTCATGGTTTG
AGTTGAAATCCACTCGATCGTGCCACGCATGCACGGCCATGTGCTTGAAG
CAGCTACCAGGCAGGACTCAGCCTTCTGCTTGAGGTTACCCTGCAGTGTC
AGCCTGTCTGGCACGCAGGGCTTGACCAATGCTTTGCCTGCCATTGTACG
TACATTAATTGCAAGGTAACATGGGCAAGTGTGGCAGGCCTGCGCGGGTT
TGGGGCCAGGGTGTGCTGACGTCAGGAAAGAATCGGAGGGCAATGATCCG
GCTGGAGGGAATCAGCCAGGGACATATAATGTTTCACTTTTCCTGGGGCG
TTGGGATGGTTGAGTGCAGGCCATGTGTACCGGCACGCTTGCGGTTGTAA
GAAAGCATTTGTCGTGTGGTGGTATGACTCTTGAATGGTGTCTTTTGGGT
GCGTGCCTTGTATTTTTAAAATTTATCCCGTGACGGCTTTCTGCCTCGTG
TTGCGGCGTTCTATGGCCCGTGCCGTTTGACCTTGACACGACTTGGAAAT
CAACACCAGGCACAGACAGGCGACCATCCCGCCGATACGTAGACAGTTAC
AAGTACATCCGTGCACTGGGAAGCTTGCATTCGTGGCGTTGGTGTTGCCT
TGTGAGAGTCGTGGCAGTGAACGTTTGAGTAACCTATCAACTTGCGCCTG
GGTTGAGTCGTCAGCATCGATCTCCGCGCCATCGTTTGAGAGAAATAAAT
TGACAAGCCAGCAACCTATTTTCTAGATGAAACGGAGTAAAACAGTGGGC
GACCTGGTAGGACTCGGGCACTACGAACGCCGCAAGTTGCTGTGGGCGAA
GCGGCAAGCCTGTGGTGTCTTTCCCGTTCCATACCCATCCCCTTCTTCAG
CTGCTCTTCGCCCTTTGGCCCCGTCCACCTTGGGGATCACAGATCGGGGG
GAGGATAATGATGGAAGAGGGACCAAGTTTGGGGGCGCGAGCGATGAGAA
TGGGGACACTTCCCGCGCGCAACCTCCCTTCCGGACACATCACCCTTTGG
ATGTGGCTCCCTCATGCGCCCTTTCTTCCACCTCCCTGCGAGACCTCCCA
CTCTCCCCCACCGCTGTCTCCGCCCCAGCCCCGACCGATCCGCCCTCCAC
ATCCATCACGAGCACACCTGGTACATCCCCATCACCAGCCGCCTTCCCCC
CGCCCCACCCGCTTTGGAGGCAATCGTCGGGCTCCGGAGTGGGCCAGGAA
ATGACAAGCATGATGTCTTCCTTGACGCTGGTAAGGAGGGAGGGAGGGAG
GGAGGGAGGGGGG
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protein sequence of rna9502

>rna9502-protein ID=rna9502-protein|Name=rna9502|organism=Nannochloropsis gaditana|type=polypeptide|length=66bp
MWTLMKICSGRGGSEEGREGGRGEGGGEDKEGRKLGGYRLVKFALIPFAD
AFEKAGGPKACAMGDD
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mRNA from alignment at KK037254.1:11496..11764-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9502 ID=rna9502|Name=rna9502|organism=Nannochloropsis gaditana|type=mRNA|length=269bp|location=Sequence derived from alignment at KK037254.1:11496..11764- (Nannochloropsis gaditana)
ATGTGGACGCTGATGAAGATGTGGACTCTTTTCGAATAGATGGAATCTGA
GACGTACGCGAAGAATGCTTACGGTGCCCCCCGGACAGCTGCTCAGGAAG
GGGAGGGAGTGAAGAAGGGAGAGAAGGAGGGAGGGGGGAGGGAGGGGGGG
AGGACAAGGAAGGCCGGAAACTGGGCGGATATCGTTTAGTAAAGTTTGCC
TTAATTCCCTTCGCGGATGCATTCGAGAAGGCAGGTGGTCCGAAGGCTTG
TGCCATGGGCGACGATTGA
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Coding sequence (CDS) from alignment at KK037254.1:11496..11764-

>rna9502 ID=rna9502|Name=rna9502|organism=Nannochloropsis gaditana|type=CDS|length=402bp|location=Sequence derived from alignment at KK037254.1:11496..11764- (Nannochloropsis gaditana)
CTGCTCAGGAAGGGGAGGGAGTGAAGAAGGGAGAGAAGGAGGGAGGGGGG
AGGGAGGGGGGGAGGACAAGGAAGGCCGGAAACTGGGCGGATATCGTTTA
GTAAAGTTTGCCTTAATTCCCTTCGCGGATGCATTCGAGAAGGCAGGTGG
TCCGAAGGCTTGTGCCATGGGCGACGATTGAATGTGGACGCTGATGAAGA
TCTGCTCAGGAAGGGGAGGGAGTGAAGAAGGGAGAGAAGGAGGGAGGGGG
GAGGGAGGGGGGGAGGACAAGGAAGGCCGGAAACTGGGCGGATATCGTTT
AGTAAAGTTTGCCTTAATTCCCTTCGCGGATGCATTCGAGAAGGCAGGTG
GTCCGAAGGCTTGTGCCATGGGCGACGATTGAATGTGGACGCTGATGAAG
AT
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Synonyms
Publications