EWM21203.1, cds9471 (CDS) Nannochloropsis gaditana

Overview
NameEWM21203.1
Unique Namecds9471
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:11745..11764 -
Alignment locationKK037254.1:11496..11676 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21203.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101229g3.10041.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:11745..11764 -
KK037254.1supercontigKK037254.1:11496..11676 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21203.1 vs. NCBI_GenBank
Match: gi|585101295|gb|EWM21203.1| (hypothetical protein Naga_101229g3 [Nannochloropsis gaditana])

HSP 1 Score: 129.413 bits (324), Expect = 4.843e-38
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 
Query:    1 MWTLMKICSGRGGSEEGREGGRGEGGGEDKEGRKLGGYRLVKFALIPFADAFEKAGGPKACAMGDD 66
            MWTLMKICSGRGGSEEGREGGRGEGGGEDKEGRKLGGYRLVKFALIPFADAFEKAGGPKACAMGDD
Sbjct:    1 MWTLMKICSGRGGSEEGREGGRGEGGGEDKEGRKLGGYRLVKFALIPFADAFEKAGGPKACAMGDD 66
The following BLAST results are available for this feature:
BLAST of EWM21203.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101295|gb|EWM21203.1|4.843e-38100.00hypothetical protein Naga_101229g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9502rna9502Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications