rna9482, rna9482 (mRNA) Nannochloropsis gaditana

Overview
Namerna9482
Unique Namerna9482
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length210
Alignment locationKK037253.1:391910..392637 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100521g4.3640.mrna
Orig protein idgnl|cribi|Naga_100521g4.3640
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:391910..392637 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100521g4gene9203Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21220.1cds9451Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9482rna9482-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9482 ID=rna9482|Name=rna9482|organism=Nannochloropsis gaditana|type=mRNA|length=210bp
ATGACGATGTCGAGGACGAGGTCGAGGATGATGACGAGGAGAGCTGGGAT
GAAGTGTACGACGAAGAGGAGGAGGCTCTGGCCGCCGATGACGATGTCGA
GGACGAGGTCGAGGATGATGACGAGGAGCTTGTCGACACATTCTTCGGAG
ACGATGACGCGGAGGATGGCGAGGAGGAGGAGGAGCTCGGGGACGACGAT
TTGCAGGTGA
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protein sequence of rna9482

>rna9482-protein ID=rna9482-protein|Name=rna9482|organism=Nannochloropsis gaditana|type=polypeptide|length=210bp
MPTLAVKRGVLVHVLAALVLTAPASEGQLFGGLGAARGRTNNNNNNAAGD
NGGGLFGFGGGGLMNAFTTRSPDPTKAPTNAPTLAPTKAPTLAPTRKPLI
KKETAPPTSYWEGDDDEDDDFTWPPTPVSENGENGPDLELTADDDADFDP
LAADDDLEDDDFEIDEDEKALAADDDIEDDDFEIDEDEEALAADDDVEDD
DFEIDEDEEV
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mRNA from alignment at KK037253.1:391910..392637-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9482 ID=rna9482|Name=rna9482|organism=Nannochloropsis gaditana|type=mRNA|length=728bp|location=Sequence derived from alignment at KK037253.1:391910..392637- (Nannochloropsis gaditana)
TCACGAAGTCTCTTTAGCCGTGAGCTATTCTTTGCACCTCTGACCCACCC
GAACCCCCGTTTCTCCCTTTCCACACAGGCACTGCGTAAACACAAACATG
CCGACTCTAGCCGTCAAACGTGGCGTTCTTGTCCACGTGCTTGCGGCTCT
CGTACTGACAGCCCCTGCTTCGGAGGGTCAGCTTTTTGGTGGTCTGGGCG
CCGCACGCGGCCGGACCAACAATAACAACAATAACGCCGCGGGTGATAAC
GGCGGTGGATTGTTTGGCTTTGGCGGAGGCGGGCTTATGAATGCCTTCAC
CACTAGGAGCCCTGATCCAACTAAGGCTCCGACGAACGCGCCCACCCTCG
CTCCTACCAAGGCGCCCACCCTGGCCCCGACGCGGAAGCCGCTGATCAAG
AAAGAAACCGCCCCCCCCACCAGCTACTGGGAAGGGGACGACGATGAGGA
CGATGACTTCACTTGGCCACCCACCCCTGTGAGCGAGAACGGCGAGAACG
GGCCGGATCTGGAACTCACGGCGGACGATGACGCTGATTTCGACCCTCTG
GCCGCCGATGATGACCTTGAGGACGATGACTTCGAGATTGACGAGGATGA
GAAGGCTCTGGCCGCTGATGATGATATTGAGGACGATGACTTCGAGATTG
ACGAAGACGAGGAGGCTCTGGCCGCTGATGACGATGTCGAGGACGATGAC
TTCGAGATTGACGAAGACGAGGAGGTTC
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Coding sequence (CDS) from alignment at KK037253.1:391910..392637-

>rna9482 ID=rna9482|Name=rna9482|organism=Nannochloropsis gaditana|type=CDS|length=631bp|location=Sequence derived from alignment at KK037253.1:391910..392637- (Nannochloropsis gaditana)
ATGCCGACTCTAGCCGTCAAACGTGGCGTTCTTGTCCACGTGCTTGCGGC
TCTCGTACTGACAGCCCCTGCTTCGGAGGGTCAGCTTTTTGGTGGTCTGG
GCGCCGCACGCGGCCGGACCAACAATAACAACAATAACGCCGCGGGTGAT
AACGGCGGTGGATTGTTTGGCTTTGGCGGAGGCGGGCTTATGAATGCCTT
CACCACTAGGAGCCCTGATCCAACTAAGGCTCCGACGAACGCGCCCACCC
TCGCTCCTACCAAGGCGCCCACCCTGGCCCCGACGCGGAAGCCGCTGATC
AAGAAAGAAACCGCCCCCCCCACCAGCTACTGGGAAGGGGACGACGATGA
GGACGATGACTTCACTTGGCCACCCACCCCTGTGAGCGAGAACGGCGAGA
ACGGGCCGGATCTGGAACTCACGGCGGACGATGACGCTGATTTCGACCCT
CTGGCCGCCGATGATGACCTTGAGGACGATGACTTCGAGATTGACGAGGA
TGAGAAGGCTCTGGCCGCTGATGATGATATTGAGGACGATGACTTCGAGA
TTGACGAAGACGAGGAGGCTCTGGCCGCTGATGACGATGTCGAGGACGAT
GACTTCGAGATTGACGAAGACGAGGAGGTTC
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Synonyms
Publications