rna9470, rna9470 (mRNA) Nannochloropsis gaditana

Overview
Namerna9470
Unique Namerna9470
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length431
Alignment locationKK037253.1:362057..363504 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101310g1.9040.mrna
Orig protein idgnl|cribi|Naga_101310g1.9040
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:362057..363504 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101310g1gene9191Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9470rna9470-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21234.1cds9439Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9470 ID=rna9470|Name=rna9470|organism=Nannochloropsis gaditana|type=mRNA|length=431bp
GGGCCTTGGGGTGATCCTTGTCACAGTTGTCGGACCACGGGTCCGGTCTC
CCACTTGGTTTCCGCGTCTCTCTTGTCCGATCGCCCCGCTCGATCTCTTG
AACTTACCTTAACATTTCTCTCCGTGTCGCGCCCGGGGGCTTGCAGCGCT
CGACCGGACTTCGGGGTGCTTTTGTACCCTGTCATCTCCATGGACAGGAA
GGTTACTCACCACGGAAGCAGGGTAGGGCGAGAGGGAGGGCGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAGGTGCTGGTGAGCTCT
CTGGCTGAACGCATCGGGTCATAGTCCACCCCTGCTTTGTCTCCCTTTCT
CTTCCTCCACGCCTTCTTTGGGGGCAGCGTGTGTGTACCTTTTTTCTCCT
TCTCCGCTCTCGTTCTCCCTTTGCTTTTCCC
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protein sequence of rna9470

>rna9470-protein ID=rna9470-protein|Name=rna9470|organism=Nannochloropsis gaditana|type=polypeptide|length=99bp
MTGNNLSLLALRIWPVDEPSVEQGHWGGIWKVSLLTALAQVLGLIGLPWL
PRNVHHQRESQGKGRDRRNLWGGRALVAFVVLAFCWTVILDVVTIVQEF
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mRNA from alignment at KK037253.1:362057..363504-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9470 ID=rna9470|Name=rna9470|organism=Nannochloropsis gaditana|type=mRNA|length=1448bp|location=Sequence derived from alignment at KK037253.1:362057..363504- (Nannochloropsis gaditana)
CCTCAGTGGGGCATCCCCGACCTGGCCTTCATACTCGGTCAGAACGTGCT
CGACGCTTTCCTGGAGGGCTTCCGGCAGCTGCCCCTGCAAATCCTCTACC
TGGGCTTCTGCCCCAAGGGCGCCGAGGGCACCACCCTCGCCACCCTCCAG
ACCTTCAACTCCCTCGCCATCATGACCGGGAACAACCTCAGCCTCCTCGC
CCTCCGGATCTGGCCCGTGGACGAACCGTCGGTGGAACAAGGGCACTGGG
GGGGCATCTGGAAGGTCTCCCTGCTCACGGCCCTCGCCCAGGTGCTTGGT
AAGGAGCTTTTGCCTTTTTTCCCTGTATGCTCGCGGGAGGGGAGGAGAGG
GGGGGAAAGAGGCTGTGCTCTCTCCCCTTCGACCCCGGGCCCTCCGTCTC
CCCCAGCTTCCCCACGAACACCGCTTCGCTTTCCACACCCCTGCCACGGG
CAAGCCCCTCCCCCCTTACGCCAAGCCAGCCCCTAATACTCCTCGCATTT
TCCCCGACTTTCCCCGACAGGTTTGATCGGCCTGCCCTGGCTCCCCCGGA
ACGTCCACCACCAGCGGGAGAGCCAAGGAAAAGGCCGAGACCGTCGGAAT
TTGTGGGGGGGGCGGGCCTTGGTGGCCTTCGTGGTGCTGGCCTTCTGTTG
GACGGTGATTTTGGACGTGGTGACGATCGTTCAAGAGTTCTAAGCCATGC
CTTTCCGTGGAAAGTTTCCATCCCTAGGGGGGCGGTGGCAAGGGGTTGCG
CCCGGGGGGGGAAACGTCTGGGGCAGGGGACGACGAGGGAGGGTCTCGGG
AGCGTAGAAGGTCCTCCCACTGGCCCGGTCTAGGCCGTTTCCAGGAGGGA
AGGAAAGGAGAAGGCAGTGTAAATACAGAGGCAAAGGGTGGTGAGGGTTG
GGGAGGGGAGGGATTTCATAGGGCGACAAGAGCGTCTGGCGTGGGGCGGG
GAAAGTGACGAGGGGGGAGAGTGCAACCGATCAATGACTCGGCAGGTGCT
AGGGGCAGGCCCCAGATGGGGATATGACCCTGCCAGCTGCGGGCGAGACC
GGTCTGAAAGAGAGGACGTGGCGTGGAGAGGCCGCCTTCCATAGCAGGAT
CGCATGCTCGTATCGCTTCGTCCTCCTGGACTTTGGGTCGGAGGAAAGCA
AAGGGCACAGTAGCGCGGGCGGCGGATCAATTAGCATACATAAGCACCAC
CGATTTTGTAGCAGGGATTATGCAGGGATTCGGATGTCTCGAGTTAGGAC
TGAAGCTATCAGCGGGAAGCGCAGACGGCGTTTCGCGCACTTAGGTGAGA
ATGGAAGGCAAAGAAGGACTGAAACTGACGAGCGGACGCCAAGAAGCTGT
GGAGTGTGCACGATAAAAATATTAAAAAATAGCAAAAGAATGCTTGCAAG
TAAAATTCTCTCCGGACGAAGGAAAAAAAAGCATCGAGCACAGACGCA
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Coding sequence (CDS) from alignment at KK037253.1:362057..363504-

>rna9470 ID=rna9470|Name=rna9470|organism=Nannochloropsis gaditana|type=CDS|length=600bp|location=Sequence derived from alignment at KK037253.1:362057..363504- (Nannochloropsis gaditana)
GTTTGATCGGCCTGCCCTGGCTCCCCCGGAACGTCCACCACCAGCGGGAG
AGCCAAGGAAAAGGCCGAGACCGTCGGAATTTGTGGGGGGGGCGGGCCTT
GGTGGCCTTCGTGGTGCTGGCCTTCTGTTGGACGGTGATTTTGGACGTGG
TGACGATCGTTCAAGAGTTCTAAATGACCGGGAACAACCTCAGCCTCCTC
GCCCTCCGGATCTGGCCCGTGGACGAACCGTCGGTGGAACAAGGGCACTG
GGGGGGCATCTGGAAGGTCTCCCTGCTCACGGCCCTCGCCCAGGTGCTTG
GTTTGATCGGCCTGCCCTGGCTCCCCCGGAACGTCCACCACCAGCGGGAG
AGCCAAGGAAAAGGCCGAGACCGTCGGAATTTGTGGGGGGGGCGGGCCTT
GGTGGCCTTCGTGGTGCTGGCCTTCTGTTGGACGGTGATTTTGGACGTGG
TGACGATCGTTCAAGAGTTCTAAATGACCGGGAACAACCTCAGCCTCCTC
GCCCTCCGGATCTGGCCCGTGGACGAACCGTCGGTGGAACAAGGGCACTG
GGGGGGCATCTGGAAGGTCTCCCTGCTCACGGCCCTCGCCCAGGTGCTTG
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Synonyms
Publications