EWM21234.1, cds9439 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21234.1 vs. NCBI_GenBank
Match: gi|585101352|gb|EWM21234.1| (hypothetical protein Naga_101310g1 [Nannochloropsis gaditana]) HSP 1 Score: 199.134 bits (505), Expect = 1.220e-64 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
Query: 1 MTGNNLSLLALRIWPVDEPSVEQGHWGGIWKVSLLTALAQVLGLIGLPWLPRNVHHQRESQGKGRDRRNLWGGRALVAFVVLAFCWTVILDVVTIVQEF 99
MTGNNLSLLALRIWPVDEPSVEQGHWGGIWKVSLLTALAQVLGLIGLPWLPRNVHHQRESQGKGRDRRNLWGGRALVAFVVLAFCWTVILDVVTIVQEF
Sbjct: 1 MTGNNLSLLALRIWPVDEPSVEQGHWGGIWKVSLLTALAQVLGLIGLPWLPRNVHHQRESQGKGRDRRNLWGGRALVAFVVLAFCWTVILDVVTIVQEF 99
BLAST of EWM21234.1 vs. NCBI_GenBank
Match: gi|585110164|gb|EWM27840.1| (folate biopterin transporter [Nannochloropsis gaditana]) HSP 1 Score: 80.1073 bits (196), Expect = 1.816e-15 Identity = 39/97 (40.21%), Postives = 60/97 (61.86%), Query Frame = 0
Query: 1 MTGNNLSLLALRIWPVDEPSVEQGHWGGIWKVSLLTALAQVLGLIGLPWLPRNVHHQRESQGKGRDRRNLWGGRALVAFVVLAFCWTVILDVVTIVQ 97
MT N+ LL L+IW V ++ G++ G+W+++LL L Q++G+ + LPRN HQ Q DR +WGG ++FVV+AF T++LDV +V
Sbjct: 575 MTSTNIGLLFLKIWDVGAETIAAGNFEGVWRLTLLCGLCQLVGVCFVKLLPRNAKHQEMLQ--SFDRNIVWGGICFISFVVIAFMATIVLDVTYMVH 669
BLAST of EWM21234.1 vs. NCBI_GenBank
Match: gi|585105320|gb|EWM24033.1| (folate biopterin transporter [Nannochloropsis gaditana]) HSP 1 Score: 62.7734 bits (151), Expect = 2.015e-9 Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 0
Query: 3 GNNLSLLALRIWPVDEPSVEQGHWGGIWKVSLLTALAQVLGLIGLPWLPRNVHHQRESQGKGRDRRNLWGGRALVAFVVLAFCWTVILDVVTIVQ 97
G++L L IW V ++ G W G+WK+SLLT+L Q LGL L LPR+V HQ+ Q D+R+ WGG V F+V+A+ WT++ + + V+
Sbjct: 501 GSDLGTLMTGIWDVSNTALAAGEWTGLWKLSLLTSLLQPLGLCLLFLLPRDVAHQKAMQKC--DKRDWWGGFGFVTFLVVAWTWTIVQTLASWVE 593 The following BLAST results are available for this feature:
BLAST of EWM21234.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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