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Properties
| Property Name | Value |
|---|
| Product | adp-ribosylation factor 3 |
| Orig transcript id | gnl|cribi|Naga_100022g62.824.mrna |
| Orig protein id | gnl|cribi|Naga_100022g62.824 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:797983..800792 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna946 ID=rna946|Name=rna946|organism=Nannochloropsis gaditana|type=mRNA|length=4431bp
ATGAATCAGGGCAACAATTGTGGGGGCAGCGGACATGAAAGAGAGCGCAA
TCGTGGGGAGAAGTCGGTCGCATTCCGTGGCAACGTTTGGCCATCCTCAC
AGAAAGACTATCGTTCTCTTTTGAGTGAAAGCGATAGGGAAGACAGAAAA
CCGGGGAATGGGTCCAGTGTGGGAGGCAGGTCCCGTAGGAATGTAAGCTA
CAGACGGGACGCGTTCGACGATGATAGAGAGCTGCGAACGAGTGGTTTTA
TCGACTTTAAAGGCCGCGAACGAGATATGGGCCTTCATAGGGGACGCTCG
CGCTCGGACAGTGAGCGTGCATCCTGGCCTACTGCACCTTTAATGTCATC
CAATCCGGGTGGTCCACTGGATAATGTCAGGAATCGTCTCCTATCGGCGT
CGGCTTCCTTGCCCTCTGATTCCTTGCAAGCTACGCGCCGCTGTACCATG
GGAGATGATGACACATCACGCAACTCGCGGGGTCGCAAGGAGGACGACGC
GACGTCGTTAGCGGCTGCAGGGACAGACCGTTTGCTGAAACTTAATATGG
ACAGAAGGAAGACAGGGAGAAGAGAAATGGAAGAAGTTAGGCATTCGACA
GCAGCAAGGGGGAAACACAAGCATTTTTCTTGGGAAGAGGGGCCACTGGA
AGCGTCGCATGCATCTAGACGGCCGTCATTGACCCAAGAAACGGGTCGTT
CTTCAGTAATTTCTAGCACGCGGACTTTATCTGCGGCTTCCATTATACAT
GGGAAGTCTTGCCTTTATGAAAGCAGCCATAATGCAGATAAGGGGCATAA
TCAGTACTTGCCGAGGAGTGACGAGCAGGGAGTCCCAGAAGTCTTTTGTC
AATCATTGCTTTGTCGCCCTCTGGATGGTGGATATGGACCGCGACGAGCT
CCTTGGCGCTACAGCGATTTATCAATAACAGAGGCTCGGCAAAGAAGGGT
TGCTTTTGAGTTGGGTGAAGTGCAAGGGGCAGGTGTAGAGGCATTCGCAT
TTGGTCATGATACTTTTTTAACTAATGGCCAGGTCGGAGGAGTAGAAGGA
CCCGATTTTGTCGAGGAGTACCCGTTATCCAGGTGTCATAGCACCTATTC
GCTCGATAATTCTGACATTCTCGAAGGACACGGGAGTATGCAAGCACCTT
GTCTTCCAACGCCTACGAAAACAGGCGTAGGAGGTGTAAGTAGGCTGCTA
AGCGTGCGCCAGGGTACGGCACATGTGTCGAGTCGAGAGCCGCGAATGGA
ACGCACCCATTCCGAGAGCTCTGGATCAGCAAGTAGTGGCCGATTGCGGC
TTGGTTGGGGTCAAGGTCTTGCACGCCGAGCAACCGCGTTTGAGCAGAAA
TCCCCGAGAGATGACGCGGCCATTCTCCCGAAAAAATACGGTGCTAGGGG
CAATGCTGACTTCGCAGCTGACAAGCCAAACAATGTAGAATTATCTTCTA
AAGTTTTAAACTCCGATCTTTGTGCCTTAAAAGATCCAGGATTGGGCGTA
TCGAAGGCGACATCACTTCAGAATGATCCCAGCCAGCAGCAGTTCTTACC
GATAGCAGACGGCATCGGTCTTCCTTCTACGTCATTCACTCAGTCACGAA
AAGGGCGGGAGCAACAAGAGAAGAGGCTACTTCAAAACAAGGGAGCCAAG
AAGTTTTTCCAGACGAGACGCTTGCGTCAAATGGCGGTTGCGTATGTCAG
ACATGTGTGGCGTAAAAACGCACTAAAACCGGCCGCAAGAGTTTCTCTTT
TCACAATTTCTTCCTCCTCTGTAGGCGGGGTATCGGCTCCTGGAGGCGTA
GTCAGCGGCAAAAATGAAAATGTGCCATTTGTCCCTAGTATCGATAAAAA
GGTGGTGCAGGAAGAACTACTTAAAACCGATGCCGCGTCATCGTCGAATA
AACAGCGTAAGGGCAGTCCGTGCCGATTTTTGGAGCAGGAAGGAGGAAAT
GTGGAGGTAAAACGTCAGAAAAGCGCCTGCATGACTGAGACCAGTTTGAC
GTCGGCAACAAAGCATGCCGAGAGGGAAGCTGCGCAAGCCAAGTTGCAGA
AGTATCGAGCGTTGTCGGCTGCTGCGGGCTATCCCCTGTGCGGTTTACTT
CCAAAAGAATCTATGGCTCGCGCCCTTAAAGTGACGGCTTGTGTGCGTGC
GTTTCGGCCGCACGCGGACAAGAACATGCAAACAGTACTTAAAGCAGAAG
CAGAAATGGTTCCATTACCGTGTCGAGAGGATATTTTGAGCGCACTCGAA
TTTGTGAATGCTGATGTGGAACGTCTTCAAGCTGAGGTCACCGTCGTCGA
AGACAGTATCTTACATGGAGCAGCTGGGTCAGCGGCATACCGGGCTCCCT
GGTGGAACAGGGCCTACGCAGATGTGCTTCGTCTGCGGCGAGAAGCTAGC
CGGAAGATAAAGATGCTCGCGTGGAAGGTGAAAAAGGAACAGCTTCTGTT
GGAGGTGTCTTCTGAAGGCGCGAGGGATAAAGTGTATGATTCAATTCAAG
CTTCGAATGCCACCGACGAAAACGCAAACGAGAATCGAGATATTCGGTGT
GGCGCTTTGGGGGCCTTGGCAAAGCGGCAGATTAGTCGAGAAGCAATTCA
AAGCATCGTGCAGTCGAGGGTAATTCAAATCCATCGCTACGTTGAGCAGC
TGACTGACCAATACACACAGATCGATGAGGCTTGGAAGCAATCCCACCCT
CCGAGACCCGATGAGTCAAGGGATGCCCACTTTGCGAGTGACATGCGAAC
GACACGGACTTTAGCGGCATTACAACGCACGTCGTTCCCGGGAGCCAATG
CAAGTGACCGCCCCACCCGCATGGGGGCATTCACTCTTCGTGGCGGAGAC
TTCGCCGGCAGTGAGTACGATGTCTCTCTAATAACACGCGAAATCGAGAA
AAAAGAGAAAATGAAAATTCGAATAGAACAAGGAGGAGCTGAAATACCTA
CAATGCTCTCATTGTCGGGACGCTTTGGTACCCACGAATTTTCCGATACC
TCAAGTGGTCCACTGACGAGCGATGGAGGGCCCATGCGATGTGCAAGCCG
GACCTTAACAGAAAAATGCACGGCAGACTGCAATTGTCCGCGGGCAGTTG
AAAGGCGGAGCCGTTATGTTAATCCTTGGTCGGATATGGAGAAGTGCATT
TTTTTGGACAAATTCCTGCAGTATCCCAAAAATTTTCGGAAGATTGCATC
TTTTTTACGCCGCAAAAGCACTCACGACGTAATTGAATTTTATTATGACT
CCAAGCAGTGTATCCACTACAAAGCTCTGCTGAAAGAAAATGAAGCGCGC
CGCCGCGGTGCTGACCAAAATTTGGTGTGGCTAAAGCACGCTGCGCGCCA
GGTAGGGGCCACGATCGACTTGCGCTGTGATAATGATGGCCATGAGGTTT
TGAGGCTTTATCCTCCAGGCAACGACTATCTCTACACAACCTTCAACAAA
CATCCCGGGAGTCGACCCTTCCATCAAACAAGCTTGCTTCAGCAATCGGG
GGAGTATGTCAAACATCAAGCCGTGGCTCGGCGTCAAGTATGCGCTACAT
CTCAAAGCATTGAACAGACGACATCTTACGCGCCTTTACCCTCCTTCGCA
TTTCCTGAGCGTCACTCCGCACAACTTTACGGTGGAAATGGCAATAACGG
CGTGGTGGTTGACAGATCCTCAGTTCCCAATGATGCGGCTTTAAACATGT
TACCAACTTTACATCATGTTGAGGAATCAAGGTCGTCAGTAGTATTTCAA
GAGCGAGATGAAACGCACTTTGTGACACCGGCGGACTTCTCGCCCCGGCA
ACATGACGATGAAGATGTGGAGGGTAAACGGGTGATGACCAAATGGACCG
AAGAGGAGAAGCATTATGCAATCCAGCTTTTGGAGACATACGGCAAACAG
TGGGCCTTGATTTCCGGCATGATGGAAGGAAGCAAGAAGCCCGAGCAAAT
AAAAAACTTTTTCAGTAACTACAAAAAAAAATATCGTCTTGATGAGCGAC
TGCCGCCGTCATTGCCCGTGCAAAGGCGCAAGGAATACTCGGCGACCAGG
CGGGTGAAATCTCCACAGCCTAGGGATTTGGCCACGACATCCTCCAGAGG
AACAGCGCTCCTACAAGACGCTAATTTGGCTCACGGCCAGCCAGCACATG
AGTACAAAGAAACATGTACACCGTTTCTCTTGGATACATTGGCCCAGGAC
CCGAATTCACGAGCGGTGATCTTCTCCTCCACCATGGCCTCCTCGGCTAA
TGAAGACGACAAAAAAAAAGTCGAGGCAGAGCAGAGGTTAGAAGGCTCAG
GGTATGTTGCATCGAAAGCCCCAGACGTACAGAGTCAACCTCAAGGTGCT
CGAGGCAGCAAGCCGAGCGGTGATGGGGAAAAGGAATTGCAATCGCCTGA
GAGGTTGCATTATGGAAACCTGTTAATCTAA back to topprotein sequence of rna946 >rna946-protein ID=rna946-protein|Name=rna946|organism=Nannochloropsis gaditana|type=polypeptide|length=189bp
MGLLFSRIIQSFSAMFGNKECRILILGLDNAGKTTILNRLQNDSDEVMQT
VPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSA
DVERLAIAKQELCAMLEEEELRESILLVFANKQDQKGALNASQISEALGL
SNLRSRQWSIQETSATKGKGLFEGFDWLSTAILGGNTSA back to topmRNA from alignment at CM002456.1:797983..800792+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna946 ID=rna946|Name=rna946|organism=Nannochloropsis gaditana|type=mRNA|length=2810bp|location=Sequence derived from alignment at CM002456.1:797983..800792+ (Nannochloropsis gaditana)
CGATGACAGTGCCTGCAGAGAAGCCGACACCCAGCAAAGCGACCCACCCT
CTTGTTTATGTACACCAATGCTCACTTTTCATTTCACTCGGACATATGCT
TTCTTCACAAGTGCATCAGCATGTAGTTCACATGGTTTAAGGACTGTTCT
TAACTTCTCATATTTTTGTTATAACTTTTTGTCTTGCTGCCCCCACAGTA
CAACCTTTCTTCCCAGGTTGACGTGTCACTCCCATTAACTTGTACCGCAT
TGCATACTGTTTTGCGTGGCGTCTTCAAGCCATTAGCAATCGACGGACAA
AGGTTGGAAAGTCGTGACGGTTCTTAGAAATGTAAGTCGAATTCGGAATC
GTTCGCTTGGGGCGGTGTGAGAAGCATGCATACTGATGATAATCGGAGGT
GTATCAGCTTGCGTAGGTGCATGGGTCCTTTGCCATGGATAAATCCCGTG
TTTTAGACCATGTTATGACTGATTGGACTGATGTTTGATTTTTGGAAATT
TGTGATATGGCGTCTGCGCAAAACAAACAGCAGTTTCGAGGGCTTGTATT
CAACTTGGATTGACGTCGAAATTGAGAAACACGACACATACCACATTCGG
CACAGGGGGCTGCTTTTCTCACGGATAATCCAGTCCTTTTCAGCAATGTT
TGGAAATAAGGAGTGCCGAATTTTGATCCTTGGTCTTGACAACGCTGGAA
AGACGACCATCTTGAACAGGTTGCAAAATGACTCGGACGAGGTTATGCAA
ACAGTTCCGACAATCGGGTGAGTCAAAATTTGAAAGTGAGCTTCTACGGA
CGACGTTTTTGTGCGCCATGCACGGCCGTCTCTCCTGAGCACACGAACGC
GCGTTTGGATGATGACAACTGCATTTCTAAGGCTTAATTGCACCAAGGAT
TTACCCGGGAAGATTTAATGCTGATTTTTTGATTTGAAAGCGTGGCAATT
AATTTCTGGCGCTTTTGGGATCATTTCCATGGTAGATTTAATGTGGAGAC
CCTTCAATATAAAAATATCAAATTCCAGGTATGTGTCAGAAAAGCATTTA
TTTACTTGCAGCGATAGGTTCCGAAATTAAATGGAAGACAAACGCTGTGC
TTGAGATCAACAGTGTAAATTCAAAATATATaatgtcctctttcccttca
cgCTTTCCCAATGTCATGGGAAATTATCGTCACGTAAGCACAGGTGTGGG
ATCTAGGTGGACAGACAAGTATTCGACCGTACTGGAGGTGCTATTATCCG
AACACCGATGCCATAATTTTTGTTGTTGATAGCGCTGACGTCGAAAGGCT
GGCGATTGCCAAGCAAGAACTGTGTGCGAtgcttgaagaggaagaactcC
GGGAGTCAATCCTTCTCGTATTTGCGAACAAGCAAGATCAAAAAGGCGCG
CTCAACGCCAGTCAGGTAAGTCGCGGGACTATCTTCATCGCTTTGAAAGT
CCTCCTTTCTACCTCCGTCCTTTCGAGATAATGAATGGCCGAAAGATTGA
TGGACTTCATTTTACATACATGAATTTAGATTTCTGAAGCGCTAGGGTTG
TCAAACCTGAGAAGTAGACAATGGTCCATTCAGGAGACTTCAGCaacgaa
aggaaagggtTTATTCGAAGGCTTCGACTGGTTGTCGACTGCCATACTTG
GAGGCAATACAAGTGCATGAGATCAATTTTGTGAAGCAGTCATACATCCC
ATCCCTGGTCGATAAACCGAAGGCTGGAATAACACTTGAGATTGTAAAGT
CATGATCGTGGCATCTGAGGGCTCCGAACACTGCGGGAATTGTACTCATA
ACCAAGCAAACCAAATTTGGTAACGTTTTTAAAATCTATTTGCAATGATG
TTTATGATCTGGTCTTCTACATAGAACGGAACAGGGAGACTCTTGGTTGG
GAGGTCATCACCAATAATTTATTTTTGATCTCGTTTAGCTGTACATGCAA
TTGAACTGACATTCTTATGATGGCGTTCAAAATGTTACCTCGTTAGCTCT
ACTTCAGGCGTTCAGTACGATATAAAAACCCCTTCAGGACTTCTTAAGCT
GCAAAAGAGGGCAATAACCATGTATTTCGATTTAGAGGCTGATAGGTAGG
ATATGTTATGCGCGACAACTCTTGTCTTTTTAAGGACGAAATAGCAAAGT
GTTTCTCTTTCCAGACCCCAACTAGAAattggaaggggagcagtGTAAAT
AAACCCTTTTTTCTTATAATGCTTGCATTCGTCAGACTTTTTCAAAATTA
CCATGCACCTTACTTTTTTCGACTCAAAGTTCGTTGCTTCTCTGCATAAA
GAACAAGCTTTTCTCCAATTTGTAGTCCCTTCCGTCGACGTGTTTCATCA
ATATACCTGCGGGCTATGTTAAAATCGCTTCCAAAAGTTTCTCCAAACTC
CTCTCGATCATCTTCATTCTGAGGACGCCAAAATGGGTTCACCTCCATAC
GCTCCCAGTGAGAAAAAAATAGCTGTGGGGAAGTTGCTGCCCCTGAAGTC
TTTTTTAAGAGCTCTGTTGCGAATCCAAAACTTTCCGCAACAGGAAGTAG
TGCTTTGATCATAAATAGATCAGTCCCTTCAAGGATATCTTCGCGAATca
cccgtcccctcctttttgaaAGTACACCATACAGCCTCCCGAGTTGCAAC
TGTAGCCATGTATGATTCAAAAAAAAATTGAAATTTGAGATCTGGTTTTT
TGCGTTCCTCATGCAAGTCAAGATGCAAATTTATCACGATTCCAAACTCA
TGACAACGTTATCAGTGACATAAGGAGACACTCACCCTGTCGCATTGAAG
ATCGCATTCA back to topCoding sequence (CDS) from alignment at CM002456.1:797983..800792+ >rna946 ID=rna946|Name=rna946|organism=Nannochloropsis gaditana|type=CDS|length=2850bp|location=Sequence derived from alignment at CM002456.1:797983..800792+ (Nannochloropsis gaditana)
ATGGGGCTGCTTTTCTCACGGATAATCCAGTCCTTTTCAGCAATGTTTGG
AAATAAGGAGTGCCGAATTTTGATCCTTGGTCTTGACAACGCTGGAAAGA
CGACCATCTTGAACAGGTTGCAAAATGACTCGGACGAGGTTATGCAAACA
GTTCCGACAATCGGATTTAATGTGGAGACCCTTCAATATAAAAATATCAA
ATTCCAGGTGTGGGATCTAGGTGGACAGACAAGTATTCGACCGTACTGGA
GGTGCTATTATCCGAACACCGATGCCATAATTTTTGTTGTTGATAGCGCT
GACGTCGAAAGGCTGGCGATTGCCAAGCAAGAACTGTGTGCGAtgcttga
agaggaagaactcCGGGAGTCAATCCTTCTCGTATTTGCGAACAAGCAAG
ATCAAAAAGGCGCGCTCAACGCCAGTCAGATTTCTGAAGCGCTAGGGTTG
TCAAACCTGAGAAGTAGACAATGGTCCATTCAGGAGACTTCAGCaacgaa
aggaaagggtTTATTCGAAGGCTTCGACTGGTTGTCGACTGCCATACTTG
GAGGCAATACAAGTGCATGAATGGGGCTGCTTTTCTCACGGATAATCCAG
TCCTTTTCAGCAATGTTTGGAAATAAGGAGTGCCGAATTTTGATCCTTGG
TCTTGACAACGCTGGAAAGACGACCATCTTGAACAGGTTGCAAAATGACT
CGGACGAGGTTATGCAAACAGTTCCGACAATCGGATTTAATGTGGAGACC
CTTCAATATAAAAATATCAAATTCCAGGTGTGGGATCTAGGTGGACAGAC
AAGTATTCGACCGTACTGGAGGTGCTATTATCCGAACACCGATGCCATAA
TTTTTGTTGTTGATAGCGCTGACGTCGAAAGGCTGGCGATTGCCAAGCAA
GAACTGTGTGCGAtgcttgaagaggaagaactcCGGGAGTCAATCCTTCT
CGTATTTGCGAACAAGCAAGATCAAAAAGGCGCGCTCAACGCCAGTCAGA
TTTCTGAAGCGCTAGGGTTGTCAAACCTGAGAAGTAGACAATGGTCCATT
CAGGAGACTTCAGCaacgaaaggaaagggtTTATTCGAAGGCTTCGACTG
GTTGTCGACTGCCATACTTGGAGGCAATACAAGTGCATGAATGGGGCTGC
TTTTCTCACGGATAATCCAGTCCTTTTCAGCAATGTTTGGAAATAAGGAG
TGCCGAATTTTGATCCTTGGTCTTGACAACGCTGGAAAGACGACCATCTT
GAACAGGTTGCAAAATGACTCGGACGAGGTTATGCAAACAGTTCCGACAA
TCGGATTTAATGTGGAGACCCTTCAATATAAAAATATCAAATTCCAGGTG
TGGGATCTAGGTGGACAGACAAGTATTCGACCGTACTGGAGGTGCTATTA
TCCGAACACCGATGCCATAATTTTTGTTGTTGATAGCGCTGACGTCGAAA
GGCTGGCGATTGCCAAGCAAGAACTGTGTGCGAtgcttgaagaggaagaa
ctcCGGGAGTCAATCCTTCTCGTATTTGCGAACAAGCAAGATCAAAAAGG
CGCGCTCAACGCCAGTCAGATTTCTGAAGCGCTAGGGTTGTCAAACCTGA
GAAGTAGACAATGGTCCATTCAGGAGACTTCAGCaacgaaaggaaagggt
TTATTCGAAGGCTTCGACTGGTTGTCGACTGCCATACTTGGAGGCAATAC
AAGTGCATGAATGGGGCTGCTTTTCTCACGGATAATCCAGTCCTTTTCAG
CAATGTTTGGAAATAAGGAGTGCCGAATTTTGATCCTTGGTCTTGACAAC
GCTGGAAAGACGACCATCTTGAACAGGTTGCAAAATGACTCGGACGAGGT
TATGCAAACAGTTCCGACAATCGGATTTAATGTGGAGACCCTTCAATATA
AAAATATCAAATTCCAGGTGTGGGATCTAGGTGGACAGACAAGTATTCGA
CCGTACTGGAGGTGCTATTATCCGAACACCGATGCCATAATTTTTGTTGT
TGATAGCGCTGACGTCGAAAGGCTGGCGATTGCCAAGCAAGAACTGTGTG
CGAtgcttgaagaggaagaactcCGGGAGTCAATCCTTCTCGTATTTGCG
AACAAGCAAGATCAAAAAGGCGCGCTCAACGCCAGTCAGATTTCTGAAGC
GCTAGGGTTGTCAAACCTGAGAAGTAGACAATGGTCCATTCAGGAGACTT
CAGCaacgaaaggaaagggtTTATTCGAAGGCTTCGACTGGTTGTCGACT
GCCATACTTGGAGGCAATACAAGTGCATGAATGGGGCTGCTTTTCTCACG
GATAATCCAGTCCTTTTCAGCAATGTTTGGAAATAAGGAGTGCCGAATTT
TGATCCTTGGTCTTGACAACGCTGGAAAGACGACCATCTTGAACAGGTTG
CAAAATGACTCGGACGAGGTTATGCAAACAGTTCCGACAATCGGATTTAA
TGTGGAGACCCTTCAATATAAAAATATCAAATTCCAGGTGTGGGATCTAG
GTGGACAGACAAGTATTCGACCGTACTGGAGGTGCTATTATCCGAACACC
GATGCCATAATTTTTGTTGTTGATAGCGCTGACGTCGAAAGGCTGGCGAT
TGCCAAGCAAGAACTGTGTGCGAtgcttgaagaggaagaactcCGGGAGT
CAATCCTTCTCGTATTTGCGAACAAGCAAGATCAAAAAGGCGCGCTCAAC
GCCAGTCAGATTTCTGAAGCGCTAGGGTTGTCAAACCTGAGAAGTAGACA
ATGGTCCATTCAGGAGACTTCAGCaacgaaaggaaagggtTTATTCGAAG
GCTTCGACTGGTTGTCGACTGCCATACTTGGAGGCAATACAAGTGCATGA back to top
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