rna9458, rna9458 (mRNA) Nannochloropsis gaditana

Overview
Namerna9458
Unique Namerna9458
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length466
Alignment locationKK037253.1:339533..340391 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100910g1.5855.mrna
Orig protein idgnl|cribi|Naga_100910g1.5855
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:339533..340391 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100910g1gene9179Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9458rna9458-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21244.1cds9427Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9458 ID=rna9458|Name=rna9458|organism=Nannochloropsis gaditana|type=mRNA|length=466bp
CCGTCCCAACGCCATTTTTTTCAAGGGAGGCTTCTTCCTCCTCGGTGACG
TCTCTCACGTCTCGGTGCCGCAAGTCTACCTGGAAGAAGGTACACTGGCT
ATGCCTATCATGACACGCGACTGGGCCTTCTGTCGGTGGCTCGCGTATGA
ATACGGCGTCATTGCCATACCGACGAGTGCGTTCTACGGATCACCGCCCG
GGCATACGGAGGAAGAAGGAGGGAGAAGTTTAGTGCGTTTCACGTTTTGT
AAAACAGACGAGACCTTAGATGCAGCAGCGAAGGCTTTGAGGAGACTTGG
AGCTAATCAACGGGAGCGGGAGGGAAAGGAGGAAACTGCAGGGCAAGTGG
AAAGGGATGGAGGGTTGTTGTAAAATAATAGGAACGAGGGCGGAGGTCTT
CAGATTTCAATGACGCCTTCCCGCAGTAAAATTAAAAGTAGCGACACTTG
TCCGGCATTGCTATTC
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protein sequence of rna9458

>rna9458-protein ID=rna9458-protein|Name=rna9458|organism=Nannochloropsis gaditana|type=polypeptide|length=192bp
MGAPSTRRVSKSGQRDGHGVNRASFHRSPLIMALLLPLLPPPVWGWGGTR
SPFPCSAFMPGGASGTSSHASTEGRRRLGWERTTGLKATTTPLTSSTTPV
KAIPASPSPSTSSPPYSTVDPPSSSSSPGPSPRPSVIANKLQKPQNAPTV
WVEFGALAASLPPEKIINLGQGFPNWVRREGGREGVGGTSEG
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mRNA from alignment at KK037253.1:339533..340391-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9458 ID=rna9458|Name=rna9458|organism=Nannochloropsis gaditana|type=mRNA|length=859bp|location=Sequence derived from alignment at KK037253.1:339533..340391- (Nannochloropsis gaditana)
AACAGAAAAAAGGGGAGCCTTTTCGGCGTCGCACACGCAGGGATGGGCGC
TCCGTCGACACGGCGAGTGTCGAAAAGTGGCCAACGTGACGGGCATGGCG
TGAACCGCGCCTCCTTTCACCGCTCGCCACTCATTATGGCTCTCCTCCTC
CCTCTCCTTCCTCCGCCCGTTTGGGGCTGGGGAGGGACAAGAAGCCCTTT
CCCATGCTCGGCTTTCATGCCCGGGGGTGCTTCTGGCACCAGCAGTCATG
CTAGCACGGAAGGAAGGAGACGGCTGGGCTGGGAGCGAACCACGGGACTG
AAGGCCACTACCACCCCTTTGACGAGCAGCACGACCCCTGTCAAGGTAGG
GCGAGGTGCTCGGGGGACCTGGTAGTGCAGCTTGTCCACTGCACGCACGT
CATGGGAAAGGCACTGAAGGGCTCACTCGTGTCTTCCTTTTCCTTCCTCC
TTTCTCAGGCGATCCCTGCCTCGCCTTCCCCCTCAACCTCCTCCCCCCCC
TACTCCACCGTCGACCCTCCCTCCTCCTCCTCGTCTCCAGGACCGTCCCC
GCGCCCAAGCGTCATTGCCAACAAGCTTCAGAAACCCCAAAACGCGCCTA
CGGTACGCCGTGCTTCCCATTTTCCTTCCCTCCTTCCCTCTCGTCCCCCC
GCTTGCTTCCTTTCGTTTCACATATTTTTTAAAATATATTTCCTGCCTCA
TCACCGCGTTATTGATCGCGTTGCGACCAGGTGTGGGTGGAATTCGGGGC
CCTTGCGGCTTCCTTGCCTCCGGAGAAGATCATCAACCTGGGTCAAGGCT
TTCCCAACTGGGTAAGGAGGGAGGGAGGGAGGGAGGGAGTGGGAGGGACA
AGCGAAGGG
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Coding sequence (CDS) from alignment at KK037253.1:339533..340391-

>rna9458 ID=rna9458|Name=rna9458|organism=Nannochloropsis gaditana|type=CDS|length=1728bp|location=Sequence derived from alignment at KK037253.1:339533..340391- (Nannochloropsis gaditana)
GTGTGGGTGGAATTCGGGGCCCTTGCGGCTTCCTTGCCTCCGGAGAAGAT
CATCAACCTGGGTCAAGGCTTTCCCAACTGGGTAAGGAGGGAGGGAGGGA
GGGAGGGAGTGGGAGGGACAAGCGAAGGGGCGATCCCTGCCTCGCCTTCC
CCCTCAACCTCCTCCCCCCCCTACTCCACCGTCGACCCTCCCTCCTCCTC
CTCGTCTCCAGGACCGTCCCCGCGCCCAAGCGTCATTGCCAACAAGCTTC
AGAAACCCCAAAACGCGCCTACGATGGGCGCTCCGTCGACACGGCGAGTG
TCGAAAAGTGGCCAACGTGACGGGCATGGCGTGAACCGCGCCTCCTTTCA
CCGCTCGCCACTCATTATGGCTCTCCTCCTCCCTCTCCTTCCTCCGCCCG
TTTGGGGCTGGGGAGGGACAAGAAGCCCTTTCCCATGCTCGGCTTTCATG
CCCGGGGGTGCTTCTGGCACCAGCAGTCATGCTAGCACGGAAGGAAGGAG
ACGGCTGGGCTGGGAGCGAACCACGGGACTGAAGGCCACTACCACCCCTT
TGACGAGCAGCACGACCCCTGTCAAGGTGTGGGTGGAATTCGGGGCCCTT
GCGGCTTCCTTGCCTCCGGAGAAGATCATCAACCTGGGTCAAGGCTTTCC
CAACTGGGTAAGGAGGGAGGGAGGGAGGGAGGGAGTGGGAGGGACAAGCG
AAGGGGCGATCCCTGCCTCGCCTTCCCCCTCAACCTCCTCCCCCCCCTAC
TCCACCGTCGACCCTCCCTCCTCCTCCTCGTCTCCAGGACCGTCCCCGCG
CCCAAGCGTCATTGCCAACAAGCTTCAGAAACCCCAAAACGCGCCTACGA
TGGGCGCTCCGTCGACACGGCGAGTGTCGAAAAGTGGCCAACGTGACGGG
CATGGCGTGAACCGCGCCTCCTTTCACCGCTCGCCACTCATTATGGCTCT
CCTCCTCCCTCTCCTTCCTCCGCCCGTTTGGGGCTGGGGAGGGACAAGAA
GCCCTTTCCCATGCTCGGCTTTCATGCCCGGGGGTGCTTCTGGCACCAGC
AGTCATGCTAGCACGGAAGGAAGGAGACGGCTGGGCTGGGAGCGAACCAC
GGGACTGAAGGCCACTACCACCCCTTTGACGAGCAGCACGACCCCTGTCA
AGGTGTGGGTGGAATTCGGGGCCCTTGCGGCTTCCTTGCCTCCGGAGAAG
ATCATCAACCTGGGTCAAGGCTTTCCCAACTGGGTAAGGAGGGAGGGAGG
GAGGGAGGGAGTGGGAGGGACAAGCGAAGGGGCGATCCCTGCCTCGCCTT
CCCCCTCAACCTCCTCCCCCCCCTACTCCACCGTCGACCCTCCCTCCTCC
TCCTCGTCTCCAGGACCGTCCCCGCGCCCAAGCGTCATTGCCAACAAGCT
TCAGAAACCCCAAAACGCGCCTACGATGGGCGCTCCGTCGACACGGCGAG
TGTCGAAAAGTGGCCAACGTGACGGGCATGGCGTGAACCGCGCCTCCTTT
CACCGCTCGCCACTCATTATGGCTCTCCTCCTCCCTCTCCTTCCTCCGCC
CGTTTGGGGCTGGGGAGGGACAAGAAGCCCTTTCCCATGCTCGGCTTTCA
TGCCCGGGGGTGCTTCTGGCACCAGCAGTCATGCTAGCACGGAAGGAAGG
AGACGGCTGGGCTGGGAGCGAACCACGGGACTGAAGGCCACTACCACCCC
TTTGACGAGCAGCACGACCCCTGTCAAG
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Synonyms
Publications