rna9457, rna9457 (mRNA) Nannochloropsis gaditana

Overview
Namerna9457
Unique Namerna9457
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:338442..339028 -

Link to JBrowse

Properties
Property NameValue
Productaminotransferase
Orig transcript idgnl|cribi|Naga_100927g1.8295.mrna
Orig protein idgnl|cribi|Naga_100927g1.8295
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:338442..339028 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100927g1gene9178Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21247.1cds9426Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9457rna9457-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

protein sequence of rna9457

>rna9457-protein ID=rna9457-protein|Name=rna9457|organism=Nannochloropsis gaditana|type=polypeptide|length=90bp
MPIMTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFC
KTDETLDAAAKALRRLGANQREREGKEETAGQVERDGGLL
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mRNA from alignment at KK037253.1:338442..339028-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9457 ID=rna9457|Name=rna9457|organism=Nannochloropsis gaditana|type=mRNA|length=587bp|location=Sequence derived from alignment at KK037253.1:338442..339028- (Nannochloropsis gaditana)
CCGTCCCAACGCCATTTTTTTCAAGGGAGGCTTCTTCCTCCTCGGTGACG
TCTCTCACGTCTCGGTGCCGCAAGTCTACCTGGAAGAAGGTAGTCTTATT
TCTCCCTCCTGCCTCCCTTGCTCTCTTACTCGTCTCATCAGTGTTTCTCG
GACCTGATTGGTTATTCCCTCCCTTTTCCCTCCCTCCCTTCGTTCCCTCC
CTCTCCATAGGTACACTGGCTATGCCTATCATGACACGCGACTGGGCCTT
CTGTCGGTGGCTCGCGTATGAATACGGCGTCATTGCCATACCGACGAGTG
CGTTCTACGGATCACCGCCCGGGCATACGGAGGAAGAAGGAGGGAGAAGT
TTAGTGCGTTTCACGTTTTGTAAAACAGACGAGACCTTAGATGCAGCAGC
GAAGGCTTTGAGGAGACTTGGAGCTAATCAACGGGAGCGGGAGGGAAAGG
AGGAAACTGCAGGGCAAGTGGAAAGGGATGGAGGGTTGTTGTAAAATAAT
AGGAACGAGGGCGGAGGTCTTCAGATTTCAATGACGCCTTCCCGCAGTAA
AATTAAAAGTAGCGACACTTGTCCGGCATTGCTATTC
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Coding sequence (CDS) from alignment at KK037253.1:338442..339028-

>rna9457 ID=rna9457|Name=rna9457|organism=Nannochloropsis gaditana|type=CDS|length=273bp|location=Sequence derived from alignment at KK037253.1:338442..339028- (Nannochloropsis gaditana)
ATGCCTATCATGACACGCGACTGGGCCTTCTGTCGGTGGCTCGCGTATGA
ATACGGCGTCATTGCCATACCGACGAGTGCGTTCTACGGATCACCGCCCG
GGCATACGGAGGAAGAAGGAGGGAGAAGTTTAGTGCGTTTCACGTTTTGT
AAAACAGACGAGACCTTAGATGCAGCAGCGAAGGCTTTGAGGAGACTTGG
AGCTAATCAACGGGAGCGGGAGGGAAAGGAGGAAACTGCAGGGCAAGTGG
AAAGGGATGGAGGGTTGTTGTAA
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Synonyms
Publications