EWM21247.1, cds9426 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|585101379|gb|EWM21247.1| (aminotransferase [Nannochloropsis gaditana]) HSP 1 Score: 187.193 bits (474), Expect = 3.017e-60 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
Query: 1 MPIMTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRLGANQREREGKEETAGQVERDGGLL 90
MPIMTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRLGANQREREGKEETAGQVERDGGLL
Sbjct: 1 MPIMTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRLGANQREREGKEETAGQVERDGGLL 90
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|299115335|emb|CBN74154.1| (Kynurenine/Oxoglutarate Transaminase [Ectocarpus siliculosus]) HSP 1 Score: 90.1225 bits (222), Expect = 3.697e-19 Identity = 41/77 (53.25%), Postives = 55/77 (71.43%), Query Frame = 0
Query: 1 MPIMTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEG-GRSLVRFTFCKTDETLDAAAKALRRLGANQREREGK 76
MP+MT DWAFCRWLA E+G++AIPTS F+ + ++G G LVRF FCKTDET++AAA+ L ++ Q + EG
Sbjct: 507 MPVMTHDWAFCRWLAIEHGLVAIPTSPFFSE---DSRKKGLGNGLVRFCFCKTDETIEAAAEVLMKMAEEQAQMEGS 580
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|873226478|emb|CEM21121.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 81.2629 bits (199), Expect = 4.719e-16 Identity = 41/74 (55.41%), Postives = 47/74 (63.51%), Query Frame = 0
Query: 2 PIMTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRLGANQREREG 75
P MTRDWAFCRWLA E GV+AIP SAFY H G +LVR FCKTD+ LD AA+ L R+ +R G
Sbjct: 444 PEMTRDWAFCRWLAKEIGVVAIPASAFYSMENRHR----GENLVRLAFCKTDDVLDEAARRLERVAEFRRLDSG 513
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|551631711|ref|XP_005818740.1| (hypothetical protein GUITHDRAFT_159025 [Guillardia theta CCMP2712] >gi|428162636|gb|EKX31760.1| hypothetical protein GUITHDRAFT_159025 [Guillardia theta CCMP2712]) HSP 1 Score: 75.485 bits (184), Expect = 4.644e-14 Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 0
Query: 4 MTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRLGANQRER 73
MTRDWA CRWLA E+G+I+IP S FY H + VRF FCKTDETL A +A R +G ++ +
Sbjct: 401 MTRDWALCRWLAKEHGIISIPCSPFYSPENRHL----ASNFVRFAFCKTDETLQEALEAFRVIGQAEQSK 466
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|909132532|gb|KNE59002.1| (hypothetical protein AMAG_03354 [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 71.633 bits (174), Expect = 1.051e-12 Identity = 34/66 (51.52%), Postives = 40/66 (60.61%), Query Frame = 0
Query: 1 MPIMTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRL 66
MP RDW C WL + GV AIP S+FY H E +L RF FCKT+ETLD A KAL++L
Sbjct: 365 MPSANRDWRVCYWLTTKIGVAAIPPSSFYSPENAHLAE----NLARFCFCKTEETLDQAVKALQKL 426
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|922853274|gb|KOO21900.1| (kynurenine-oxoglutarate transaminase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 71.633 bits (174), Expect = 1.231e-12 Identity = 34/67 (50.75%), Postives = 41/67 (61.19%), Query Frame = 0
Query: 4 MTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRLGANQ 70
+TRDWA CRWLAYE GVIAIPTS F+ P H + VRF FCK+D+T+ A L L +
Sbjct: 356 VTRDWALCRWLAYEAGVIAIPTSPFFSPPNKHL----AANYVRFAFCKSDDTIREACDRLEALTKHH 418
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|470474326|ref|XP_004342060.1| (Kynurenine Aminotransferase [Acanthamoeba castellanii str. Neff] >gi|440798890|gb|ELR19951.1| Kynurenine Aminotransferase [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 69.707 bits (169), Expect = 5.572e-12 Identity = 35/62 (56.45%), Postives = 39/62 (62.90%), Query Frame = 0
Query: 5 TRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRL 66
TRD+ FCRWL E GV AIP SAF+ H E + VRFTFCK DE LDAAA L +L
Sbjct: 422 TRDYQFCRWLTRELGVGAIPPSAFFSKENAHIAE----NFVRFTFCKRDEVLDAAATKLHKL 479
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|909131102|gb|KNE57821.1| (hypothetical protein AMAG_04668 [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 69.3218 bits (168), Expect = 8.704e-12 Identity = 33/66 (50.00%), Postives = 39/66 (59.09%), Query Frame = 0
Query: 1 MPIMTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRL 66
MP RDW C WL + GV AIP S+FY H E +L RF FCKT+ETLD A AL++L
Sbjct: 411 MPSTNRDWRVCYWLTTKIGVAAIPPSSFYSPENAHLAE----NLARFCFCKTEETLDQAVAALQKL 472
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|829190332|ref|XP_001033561.2| (kynurenine-oxoglutarate transaminase [Tetrahymena thermophila SB210] >gi|586729511|gb|EAR85898.2| kynurenine-oxoglutarate transaminase [Tetrahymena thermophila SB210]) HSP 1 Score: 68.9366 bits (167), Expect = 1.200e-11 Identity = 34/70 (48.57%), Postives = 42/70 (60.00%), Query Frame = 0
Query: 5 TRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAK----ALRRLGANQ 70
T+DWAFC WL E GV+A+P SAFY H G++LVR FCKT+ETL A K L + +NQ
Sbjct: 377 TKDWAFCLWLCKEKGVVALPCSAFYSKQYAHI----GQNLVRIAFCKTEETLIEAGKRIGSTLHKTNSNQ 442
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|470474271|ref|XP_004342058.1| (Kynurenine--oxoglutarate transaminase [Acanthamoeba castellanii str. Neff] >gi|440798888|gb|ELR19949.1| Kynurenine--oxoglutarate transaminase [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 67.0106 bits (162), Expect = 1.759e-11 Identity = 34/62 (54.84%), Postives = 38/62 (61.29%), Query Frame = 0
Query: 5 TRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRL 66
TR + FCRWL E GV AIP SAF+ H E + VRFTFCK DE LDAAA L +L
Sbjct: 171 TRSYQFCRWLTRELGVGAIPPSAFFSKENAHIAE----NFVRFTFCKRDEVLDAAATKLHKL 228 The following BLAST results are available for this feature:
BLAST of EWM21247.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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