EWM21247.1, cds9426 (CDS) Nannochloropsis gaditana

Overview
NameEWM21247.1
Unique Namecds9426
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:338535..338807 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21247.1
Productaminotransferase
Orig transcript idgnl|cribi|Naga_100927g1.8295.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:338535..338807 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR015424PyrdxlP-dep_Trfase
IPR015422PyrdxlP-dep_Trfase_major_sub2
Homology
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|585101379|gb|EWM21247.1| (aminotransferase [Nannochloropsis gaditana])

HSP 1 Score: 187.193 bits (474), Expect = 3.017e-60
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
Query:    1 MPIMTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRLGANQREREGKEETAGQVERDGGLL 90
            MPIMTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRLGANQREREGKEETAGQVERDGGLL
Sbjct:    1 MPIMTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRLGANQREREGKEETAGQVERDGGLL 90          
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|299115335|emb|CBN74154.1| (Kynurenine/Oxoglutarate Transaminase [Ectocarpus siliculosus])

HSP 1 Score: 90.1225 bits (222), Expect = 3.697e-19
Identity = 41/77 (53.25%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    1 MPIMTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEG-GRSLVRFTFCKTDETLDAAAKALRRLGANQREREGK 76
            MP+MT DWAFCRWLA E+G++AIPTS F+      + ++G G  LVRF FCKTDET++AAA+ L ++   Q + EG 
Sbjct:  507 MPVMTHDWAFCRWLAIEHGLVAIPTSPFFSE---DSRKKGLGNGLVRFCFCKTDETIEAAAEVLMKMAEEQAQMEGS 580          
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|873226478|emb|CEM21121.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 81.2629 bits (199), Expect = 4.719e-16
Identity = 41/74 (55.41%), Postives = 47/74 (63.51%), Query Frame = 0
Query:    2 PIMTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRLGANQREREG 75
            P MTRDWAFCRWLA E GV+AIP SAFY     H     G +LVR  FCKTD+ LD AA+ L R+   +R   G
Sbjct:  444 PEMTRDWAFCRWLAKEIGVVAIPASAFYSMENRHR----GENLVRLAFCKTDDVLDEAARRLERVAEFRRLDSG 513          
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|551631711|ref|XP_005818740.1| (hypothetical protein GUITHDRAFT_159025 [Guillardia theta CCMP2712] >gi|428162636|gb|EKX31760.1| hypothetical protein GUITHDRAFT_159025 [Guillardia theta CCMP2712])

HSP 1 Score: 75.485 bits (184), Expect = 4.644e-14
Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 0
Query:    4 MTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRLGANQRER 73
            MTRDWA CRWLA E+G+I+IP S FY     H       + VRF FCKTDETL  A +A R +G  ++ +
Sbjct:  401 MTRDWALCRWLAKEHGIISIPCSPFYSPENRHL----ASNFVRFAFCKTDETLQEALEAFRVIGQAEQSK 466          
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|909132532|gb|KNE59002.1| (hypothetical protein AMAG_03354 [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 71.633 bits (174), Expect = 1.051e-12
Identity = 34/66 (51.52%), Postives = 40/66 (60.61%), Query Frame = 0
Query:    1 MPIMTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRL 66
            MP   RDW  C WL  + GV AIP S+FY     H  E    +L RF FCKT+ETLD A KAL++L
Sbjct:  365 MPSANRDWRVCYWLTTKIGVAAIPPSSFYSPENAHLAE----NLARFCFCKTEETLDQAVKALQKL 426          
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|922853274|gb|KOO21900.1| (kynurenine-oxoglutarate transaminase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 71.633 bits (174), Expect = 1.231e-12
Identity = 34/67 (50.75%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    4 MTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRLGANQ 70
            +TRDWA CRWLAYE GVIAIPTS F+  P  H       + VRF FCK+D+T+  A   L  L  + 
Sbjct:  356 VTRDWALCRWLAYEAGVIAIPTSPFFSPPNKHL----AANYVRFAFCKSDDTIREACDRLEALTKHH 418          
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|470474326|ref|XP_004342060.1| (Kynurenine Aminotransferase [Acanthamoeba castellanii str. Neff] >gi|440798890|gb|ELR19951.1| Kynurenine Aminotransferase [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 69.707 bits (169), Expect = 5.572e-12
Identity = 35/62 (56.45%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    5 TRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRL 66
            TRD+ FCRWL  E GV AIP SAF+     H  E    + VRFTFCK DE LDAAA  L +L
Sbjct:  422 TRDYQFCRWLTRELGVGAIPPSAFFSKENAHIAE----NFVRFTFCKRDEVLDAAATKLHKL 479          
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|909131102|gb|KNE57821.1| (hypothetical protein AMAG_04668 [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 69.3218 bits (168), Expect = 8.704e-12
Identity = 33/66 (50.00%), Postives = 39/66 (59.09%), Query Frame = 0
Query:    1 MPIMTRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRL 66
            MP   RDW  C WL  + GV AIP S+FY     H  E    +L RF FCKT+ETLD A  AL++L
Sbjct:  411 MPSTNRDWRVCYWLTTKIGVAAIPPSSFYSPENAHLAE----NLARFCFCKTEETLDQAVAALQKL 472          
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|829190332|ref|XP_001033561.2| (kynurenine-oxoglutarate transaminase [Tetrahymena thermophila SB210] >gi|586729511|gb|EAR85898.2| kynurenine-oxoglutarate transaminase [Tetrahymena thermophila SB210])

HSP 1 Score: 68.9366 bits (167), Expect = 1.200e-11
Identity = 34/70 (48.57%), Postives = 42/70 (60.00%), Query Frame = 0
Query:    5 TRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAK----ALRRLGANQ 70
            T+DWAFC WL  E GV+A+P SAFY     H     G++LVR  FCKT+ETL  A K     L +  +NQ
Sbjct:  377 TKDWAFCLWLCKEKGVVALPCSAFYSKQYAHI----GQNLVRIAFCKTEETLIEAGKRIGSTLHKTNSNQ 442          
BLAST of EWM21247.1 vs. NCBI_GenBank
Match: gi|470474271|ref|XP_004342058.1| (Kynurenine--oxoglutarate transaminase [Acanthamoeba castellanii str. Neff] >gi|440798888|gb|ELR19949.1| Kynurenine--oxoglutarate transaminase [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 67.0106 bits (162), Expect = 1.759e-11
Identity = 34/62 (54.84%), Postives = 38/62 (61.29%), Query Frame = 0
Query:    5 TRDWAFCRWLAYEYGVIAIPTSAFYGSPPGHTEEEGGRSLVRFTFCKTDETLDAAAKALRRL 66
            TR + FCRWL  E GV AIP SAF+     H  E    + VRFTFCK DE LDAAA  L +L
Sbjct:  171 TRSYQFCRWLTRELGVGAIPPSAFFSKENAHIAE----NFVRFTFCKRDEVLDAAATKLHKL 228          
The following BLAST results are available for this feature:
BLAST of EWM21247.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101379|gb|EWM21247.1|3.017e-60100.00aminotransferase [Nannochloropsis gaditana][more]
gi|299115335|emb|CBN74154.1|3.697e-1953.25Kynurenine/Oxoglutarate Transaminase [Ectocarpus s... [more]
gi|873226478|emb|CEM21121.1|4.719e-1655.41unnamed protein product [Vitrella brassicaformis C... [more]
gi|551631711|ref|XP_005818740.1|4.644e-1450.00hypothetical protein GUITHDRAFT_159025 [Guillardia... [more]
gi|909132532|gb|KNE59002.1|1.051e-1251.52hypothetical protein AMAG_03354 [Allomyces macrogy... [more]
gi|922853274|gb|KOO21900.1|1.231e-1250.75kynurenine-oxoglutarate transaminase [Chrysochromu... [more]
gi|470474326|ref|XP_004342060.1|5.572e-1256.45Kynurenine Aminotransferase [Acanthamoeba castella... [more]
gi|909131102|gb|KNE57821.1|8.704e-1250.00hypothetical protein AMAG_04668 [Allomyces macrogy... [more]
gi|829190332|ref|XP_001033561.2|1.200e-1148.57kynurenine-oxoglutarate transaminase [Tetrahymena ... [more]
gi|470474271|ref|XP_004342058.1|1.759e-1154.84Kynurenine--oxoglutarate transaminase [Acanthamoeb... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9457rna9457Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications