rna9455, rna9455 (mRNA) Nannochloropsis gaditana

Overview
Namerna9455
Unique Namerna9455
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1616
Alignment locationKK037253.1:334589..335495 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100927g2.8296.mrna
Orig protein idgnl|cribi|Naga_100927g2.8296
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:334589..335495 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100927g2gene9176Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9455rna9455-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21248.1cds9425Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9455 ID=rna9455|Name=rna9455|organism=Nannochloropsis gaditana|type=mRNA|length=1616bp
TCTAACAGGAGCTTTTCTTAGTATGGTCGCAAAGGACACAAAAACCGTAG
TCCATCAGTCAAATATGTACAAAACCCCAATCCGTCTACCATGAAGGACA
CAGAGCTGCCGGATACGGAGCAGCTTGGCAGGGATGCTCACCCACGTACA
TCCCTGTCACATCTCAGGATAGCTTACGCCCTGATGCTGGTACTTTCACT
CGCGTCGATGTGGAAGATGGGGAGCCGGCGCGAGCTCCTTGTGGGAACGG
AGATCACAGCATCCATCCCACCGATCGAGCGCAACAAGAGTCTCTTTTAC
GTCACCACCCATCTTTCTCCGTCACACTACGAGTTTTTCCAGAAATGCTG
GCCGTCTCTCATTGCTAAGAGCCAATTATACAAGGAATCAGACTTTTTGA
TTTTCGCCACTGGATCGAATGCCAGCAATATCGATTGGAGCGTACTAAAT
GCTACCTTTGCCAACGCGACATACGCCGTGCAAGTCATGGATAATCCTGG
ATACCAAGAAGGAGCCATGTTGGCGTTGACCGAGGCATTCAGTAAGCACT
GGTTCGATGGTTACGAGTGGGTGATACGTGTCAATCCCGACGTGCTGATC
CGGAACGATACGTTTTTGCGGAAGAGTATGCAAGACTCGAGCATCAAGGG
GATTTTTGCGGACTGTTTGGAAACGCCTTGTGCAACCGGCACAAACTGCA
CGAATAGACTGATCCATACGGATTTCTTTGCGATCCGACCCGAAGCTGTC
TCTGAGCAAGCTGTTTTGGAAGCAAGATCGAAGCAAACGAATGCCGAACG
AATGGCTACTCAAGCCTTTTCCAGCATAGTGCTCGCCGGGGCTGATAGCT
GGGTTCCGAACGTAGGACCCCTTGGTTTGCAGTGTCGTGTCGGAGGTGTG
GCTTCTCCAGTGATGCACACTCACAATCAACGGCAAGTTCATCCCCAATG
CCTGTCTTGGTATGACTAGCCATTGAGTGGTCTCCAGTCAGAGTCTGACG
AATTGAGTATCATGTGCCAGGTTTGGTCGACTGAGGACAGCATCACCTCA
CAAAATGGTGCGAGGGTCTGTCTGTATAATCGCCGGGCGCAGCCATGGGT
TTGTGAGCTGTCATCCCGGCTGAAGCAGCGGATGAGAATGGAGAGATGGA
AAACGAGTAGACTACAAGAGCTTGTAGGGCTTTGGTTTGTGCGAGGGATA
TGTTTTGACGATGGTTACCCAATAGTTTTGTGACAAGCACATACGTATAT
ACCTATATACTTCTATATACATATATATAGGTATATGTATAAAAAGGTAT
ATTGCTATGACGCTGCTGTAGCGGTAAGCATATGATAGCAAAGTCGTTGA
TGATTTCATTGGAAAAAATACGGAAAACAGAAAATCCAAGACGTTGGTTC
CTCTGCTTCACCAGTCTGCAAGCTTACAAGTTGCTTTCGTGATCAAGTTT
CACAATTGCGTTGAAAACTACTCGAGAGCCACCAACATAAAGAATGCAAT
CCCTGCATGTGGATAGCCAAAGCCTGTGTAGAGGTAAGAAGTCACCTTTT
GCCAGTCTTTGGGCCCGCACACGGATCTGTGGCTTCTCGGACACAAGGTG
CATGCGCCCGTATTCC
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protein sequence of rna9455

>rna9455-protein ID=rna9455-protein|Name=rna9455|organism=Nannochloropsis gaditana|type=polypeptide|length=140bp
MSTWSTASNGGPKDSVSNFSSTRRKPSLCQTGHSTSNCSENVRNVNGPRT
TSLPKALAIAMAFAAGVLCNPTTAFHVPNFLSLPCIPSQLPLSRTPAVWG
GHEVRGGHSLALYPPLVGPAVPTGVRSLTLFSLPVPGCLS
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mRNA from alignment at KK037253.1:334589..335495-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9455 ID=rna9455|Name=rna9455|organism=Nannochloropsis gaditana|type=mRNA|length=907bp|location=Sequence derived from alignment at KK037253.1:334589..335495- (Nannochloropsis gaditana)
AGAGCGTAGTTAACAGTTCTTGACACAGTGTGCCTTTTTTACCTTTCTTT
AACCTCCCTCAGTAACGGGATTTCCCCCCTTATTTCGACTGGGCAAGTGA
CCATGTCGACATGGAGCACGGCTTCAAATGGAGGGCCAAAGGACTCCGTA
TCAAACTTCTCTTCTACAAGGAGGAAACCCAGTCTTTGTCAGACCGGTCA
TAGCACCAGCAACTGCAGTGAAAACGTGCGCAACGTCAACGGCCCACGTA
CCACCAGCTTGCCCAAAGCCCTCGCCATTGCCATGGCTTTTGCTGCGGGC
GTACTCTGCAACCCCACGACCGCCTTCCACGTGCCGAATTTCCTTTCCTT
GCCATGTACGTTCATTGTGCCCTCGAAGATACCACCAAAGCCGTCGTGGC
CTCGGCGAGCCCATCGTTTGGTCCCCCCTTCCCTTGCGCGATGCCCCTGC
CGCTCCTACACCCCAACTCCCACAACCCTTATTGGCATTGATTTTTTGCT
GGGTTCTTACCACTCTTCCAGGCATCCCTTCTCAGCTACCCTTGAGCAGA
ACGCCTGCCGTCTGGGGCGGACATGAGGTACGTGGAGGCCATTCCCTCGC
CCTCTATCCTCCTCTTGTTGGGCCCGCCGTCCCCACCGGCGTCCGCTCCC
TCACCCTCTTCTCCCTCCCTGTCCCTGGCTGTCTCTCGTGATGGTAGGGT
GCGGCCCTGCTGTTCACCGGAAGAAGATGTGCGGCCAGCATCACTGGGCG
GTGCAGTGCCGCGGTTGCCTCGGCGGCATCCATGCCCGCGCCGGAAGGCA
GGAAGGAGGGCGAGGGGGCCAAAAGGGACGAGGACCTGCCCGAGCTTAAC
TCGATCCTGAGCAAGAAGATCGTGATCGGAAACAAGTTTTTGACCCCCAT
GTGCGTG
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Coding sequence (CDS) from alignment at KK037253.1:334589..335495-

>rna9455 ID=rna9455|Name=rna9455|organism=Nannochloropsis gaditana|type=CDS|length=846bp|location=Sequence derived from alignment at KK037253.1:334589..335495- (Nannochloropsis gaditana)
GCATCCCTTCTCAGCTACCCTTGAGCAGAACGCCTGCCGTCTGGGGCGGA
CATGAGGTACGTGGAGGCCATTCCCTCGCCCTCTATCCTCCTCTTGTTGG
GCCCGCCGTCCCCACCGGCGTCCGCTCCCTCACCCTCTTCTCCCTCCCTG
TCCCTGGCTGTCTCTCGTGAATGTCGACATGGAGCACGGCTTCAAATGGA
GGGCCAAAGGACTCCGTATCAAACTTCTCTTCTACAAGGAGGAAACCCAG
TCTTTGTCAGACCGGTCATAGCACCAGCAACTGCAGTGAAAACGTGCGCA
ACGTCAACGGCCCACGTACCACCAGCTTGCCCAAAGCCCTCGCCATTGCC
ATGGCTTTTGCTGCGGGCGTACTCTGCAACCCCACGACCGCCTTCCACGT
GCCGAATTTCCTTTCCTTGCCATGCATCCCTTCTCAGCTACCCTTGAGCA
GAACGCCTGCCGTCTGGGGCGGACATGAGGTACGTGGAGGCCATTCCCTC
GCCCTCTATCCTCCTCTTGTTGGGCCCGCCGTCCCCACCGGCGTCCGCTC
CCTCACCCTCTTCTCCCTCCCTGTCCCTGGCTGTCTCTCGTGAATGTCGA
CATGGAGCACGGCTTCAAATGGAGGGCCAAAGGACTCCGTATCAAACTTC
TCTTCTACAAGGAGGAAACCCAGTCTTTGTCAGACCGGTCATAGCACCAG
CAACTGCAGTGAAAACGTGCGCAACGTCAACGGCCCACGTACCACCAGCT
TGCCCAAAGCCCTCGCCATTGCCATGGCTTTTGCTGCGGGCGTACTCTGC
AACCCCACGACCGCCTTCCACGTGCCGAATTTCCTTTCCTTGCCAT
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Synonyms
Publications