rna9451, rna9451 (mRNA) Nannochloropsis gaditana

Overview
Namerna9451
Unique Namerna9451
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length504
Alignment locationKK037253.1:323473..324305 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101184g1.2342.mrna
Orig protein idgnl|cribi|Naga_101184g1.2342
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:323473..324305 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101184g1gene9172Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9451rna9451-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21251.1cds9421Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9451 ID=rna9451|Name=rna9451|organism=Nannochloropsis gaditana|type=mRNA|length=504bp
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTACTCTTTCCCGTCCTCCCTCCTTTCCGTGCTCCGTG
CAGACGAGGCGCTACGTGGCATGGAAGAAAAATGCCTCCTGCTCACGCGT
CTGGAGGACGATCAGCGCCTATGGAAAGAGGAGAAGGAGATGCTTCAAGA
AGAGCTCGAAGTGGCCCGCTCGGTGCCTATACCCCTTTCCCCTCTTCTTC
CTACCTCCCTCCCTTTTCTCCCTCTCTCTTACTTTCTCGTTTCTTCTGAT
CTTTCGCGTCCTTCTCTTTCTTTCGTCTCCATTCAAGACCTAGTGCTGGT
TGATGTCCTCATTTCACAGACGGCCATGGACCTTGACAGCTTAGCTCACC
TCCTTCCCTCCCTCCCTCCCTCCCTCCCTGCCTTCCCCGCAGAACCAAGA
ACGGGGCGTGGAGGGATTGAGGCAGGAGGTTCGGGAATCGGAGGCGGCCC
TTGA
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protein sequence of rna9451

>rna9451-protein ID=rna9451-protein|Name=rna9451|organism=Nannochloropsis gaditana|type=polypeptide|length=170bp
MSQSLFNKLQSGLNYLDGAFKETMEGEEEATEEMLLEQRRQRQLRMTAVQ
QQAAFGSALYPSDSGTQESGFPPGMVARKEDAATGKGNEIPVKEEKGHEH
LAGTARKPAPPAPSRRSPPPPHPGVHIRREGGSAEEEVAETPACLLGMSS
PLAAGPLVRESEVWKEEAGE
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mRNA from alignment at KK037253.1:323473..324305-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9451 ID=rna9451|Name=rna9451|organism=Nannochloropsis gaditana|type=mRNA|length=833bp|location=Sequence derived from alignment at KK037253.1:323473..324305- (Nannochloropsis gaditana)
AATATAGCTACCGATAGCTGATTTTTGTGCTTTCACGTGATTTTGCAGGG
CATACGCAGCGGTTCATTTTACGACAGCAGCGGGTCGTCATGTCGCAGTC
TTTGTTCAACAAACTCCAATCTGGTCTCAATTACCTGGATGGGGCTTTCA
AGGAGACCATGGAGGGCGAAGAGGAGGCGACCGAGGAGATGCTGCTAGAG
CAGCGACGACAGGTATCGTAGGAAAAGATCATGAAGAGGGGCACGTTAGA
GGTGCCAGTAAGCCCTGAGGCGTCAAGACGCACCGGTACTCGAGCGTGCT
CCCCGCTGTCTGGGCGGGACATGGTTAAATGCGAGAGCAGCAAGGGGTCA
TGGGCCGTTGATTTGCCTCCCCTGTCCAGCGAGCATGCATCCCAAACCCT
TTCTTCCTCCCTTTCCTTGCCGCGACCCACCTTCTATCCCCAGCGCCAAC
TTCGCATGACCGCAGTCCAACAGCAAGCCGCCTTTGGGAGTGCCCTGTAC
CCCTCGGACTCGGGGACACAGGAGAGCGGCTTTCCTCCGGGGATGGTGGC
GCGGAAAGAAGATGCGGCCACGGGAAAGGGGAATGAGATCCCCGTCAAGG
AGGAGAAAGGTCATGAACATTTGGCAGGTACTGCACGGAAGCCCGCCCCG
CCAGCACCTTCGAGACGCTCGCCTCCTCCTCCCCACCCCGGCGTCCACAT
TCGAAGGGAGGGGGGAAGCGCGGAGGAAGAGGTTGCCGAGACCCCTGCCT
GCTTGCTGGGCATGTCCTCTCCGTTAGCGGCGGGGCCCCTGGTCCGGGAA
AGCGAGGTGTGGAAAGAGGAAGCGGGGGAGTGA
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Coding sequence (CDS) from alignment at KK037253.1:323473..324305-

>rna9451 ID=rna9451|Name=rna9451|organism=Nannochloropsis gaditana|type=CDS|length=1026bp|location=Sequence derived from alignment at KK037253.1:323473..324305- (Nannochloropsis gaditana)
CGCCAACTTCGCATGACCGCAGTCCAACAGCAAGCCGCCTTTGGGAGTGC
CCTGTACCCCTCGGACTCGGGGACACAGGAGAGCGGCTTTCCTCCGGGGA
TGGTGGCGCGGAAAGAAGATGCGGCCACGGGAAAGGGGAATGAGATCCCC
GTCAAGGAGGAGAAAGGTCATGAACATTTGGCAGGTACTGCACGGAAGCC
CGCCCCGCCAGCACCTTCGAGACGCTCGCCTCCTCCTCCCCACCCCGGCG
TCCACATTCGAAGGGAGGGGGGAAGCGCGGAGGAAGAGGTTGCCGAGACC
CCTGCCTGCTTGCTGGGCATGTCCTCTCCGTTAGCGGCGGGGCCCCTGGT
CCGGGAAAGCGAGGTGTGGAAAGAGGAAGCGGGGGAGTGAATGTCGCAGT
CTTTGTTCAACAAACTCCAATCTGGTCTCAATTACCTGGATGGGGCTTTC
AAGGAGACCATGGAGGGCGAAGAGGAGGCGACCGAGGAGATGCTGCTAGA
GCAGCGACGACAGCGCCAACTTCGCATGACCGCAGTCCAACAGCAAGCCG
CCTTTGGGAGTGCCCTGTACCCCTCGGACTCGGGGACACAGGAGAGCGGC
TTTCCTCCGGGGATGGTGGCGCGGAAAGAAGATGCGGCCACGGGAAAGGG
GAATGAGATCCCCGTCAAGGAGGAGAAAGGTCATGAACATTTGGCAGGTA
CTGCACGGAAGCCCGCCCCGCCAGCACCTTCGAGACGCTCGCCTCCTCCT
CCCCACCCCGGCGTCCACATTCGAAGGGAGGGGGGAAGCGCGGAGGAAGA
GGTTGCCGAGACCCCTGCCTGCTTGCTGGGCATGTCCTCTCCGTTAGCGG
CGGGGCCCCTGGTCCGGGAAAGCGAGGTGTGGAAAGAGGAAGCGGGGGAG
TGAATGTCGCAGTCTTTGTTCAACAAACTCCAATCTGGTCTCAATTACCT
GGATGGGGCTTTCAAGGAGACCATGGAGGGCGAAGAGGAGGCGACCGAGG
AGATGCTGCTAGAGCAGCGACGACAG
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Synonyms
Publications