rna9447, rna9447 (mRNA) Nannochloropsis gaditana

Overview
Namerna9447
Unique Namerna9447
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length917
Alignment locationKK037253.1:317528..318338 -

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Properties
Property NameValue
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101545g1.9945.mrna
Orig protein idgnl|cribi|Naga_101545g1.9945
GbkeymRNA
End range.
End range318338
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:317528..318338 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101545g1gene9168Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21256.1cds9417Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9447rna9447-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9447 ID=rna9447|Name=rna9447|organism=Nannochloropsis gaditana|type=mRNA|length=917bp
TGGCCTCGACATAAGAACATACGCACACATTGATCTTAAACATCGGAAAA
CGGAGAGGTTCTGCATCCCCTCACCAGTCCAGGCACTTTTTTAGAATTGC
GCATGGCGTTGTTGTGCAGCCATTGGGCTAGGTTGGGTGGAAGCTAACTT
TCTGATCAACCTTCTCACAAGCGGATATTTTCCCTACTGTGACCACTCGG
TGACAGAAATCTTTTCGGGTAGAAAACAGTCGTTTTCTACCATCACAACA
AGCTTGCTGACGTGCACTGGTCATTTTGACGTGGCAAAAGAGAGCATGCC
GGCATCTCTTTTCGCAGGGTCGGCACCGTGTCCCGTCGGAGGCCCTAACG
TCCCCATGGATGGTGGAGAAGGCGATCTCCGAGTAGCTGACGAAGGACAA
AGCACCATTTCCGAAGATCTGACACGCACAACCACTACGGTAGACGCCAC
GTCGCTTTCCTCTTCCTCTCGCAGCCCTAGTGTGGCAGCCGGTGGGGATA
GCACTGCCGTTGCCAGAACCTCCGTAGGTGCTGCTACTATTGGCTCCGAC
TTGATCACACGCACGCAGCTCGACGGGACATTCTCCGTTGTCGATACTCC
CGGCAGAATGGCAGAGGTGAAGCCAAAGCGGTGGAGGAGAACAAGGAATC
AGGCCATGGAGACCCCTGCCTTGGCCTCTCCGGGCTTGCCGGCGTCCTCG
ATGGGGGAATGGGTCCGCTTGGATAAGGAAGAGGAGGAGGAAGAGGAGGG
AGAAGAGGAGGGGGAGGAGGAGGGGGAGGAGGAGGAGGAGGAGGATGAGG
AGGAGGAGGAGGAGGAGGAGGAGGCGTCTTTGCCCCCCAGTCTCGCTGCC
GGGGCCCAATTCCTGTCTACCTCGCCCCTCGCCCCTTTCTCTTCCCCTTC
CTCCTCCCCTCCCCCCC
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protein sequence of rna9447

>rna9447-protein ID=rna9447-protein|Name=rna9447|organism=Nannochloropsis gaditana|type=polypeptide|length=102bp
KQHQLEESVDDAADIRALLRGEIQGLMRGSAVGRAIVQEHPKELAIMESW
EILPELRPTPQGEVFCFPVHENSGLAETLTKFLARERATGSLQSLLRKYA
LV
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mRNA from alignment at KK037253.1:317528..318338-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9447 ID=rna9447|Name=rna9447|organism=Nannochloropsis gaditana|type=mRNA|length=811bp|location=Sequence derived from alignment at KK037253.1:317528..318338- (Nannochloropsis gaditana)
GGAAACAACATCAACTTGAAGAATCCGTGGACGACGCGGCGGATATTCGC
GCATTGTTGCGGGGAGAAATCCAAGGATTAATGAGGGGCTCCGCCGTTGG
GCGGGCCATTGTGCAGGAGCATCCGAAGGAATTGGCCATAATGGAGTCCT
GGGAAATCTTACCGGAGTTACGACCGACACCGCAGGGCGAAGTGTTCTGC
TTTCCTGTGCACGAAAATAGCGGTCTGGCTGAGACCCTGACTAAGTTTCT
CGCTCGAGAACGGGCGACGGGTTCTCTACAAAGCCTGCTGCGCAAGTATG
CTTTGGTTTGAGTGGCGAGACAGGCAGAATAGGCGGAAGGACTAAGGATG
TATTTGCATTTCATTAGAATGGTGAGCGTGGCATTTCTGATTCTCCTCCT
GCAATGTTGTTGAAAATTCTCACCATTTTAAGTCTGAATTCTCCTCTCTT
GAAACAATAGATAAGAAAGCGAGTCGATGAAATGTGTATCAGACATATGC
TGTACGCAAAATGAGGTGATAGTGCGAGCACAAATTGGTAGAGAGTGACA
CTCACATTGATTTGAACACAGTTTCGCATTGAAAGTATCGGAAGCAGTAT
CGACGACCAACTTTCTCCCCACTTCGTATAATTTTTGTGACTTTAACTAT
TCGAAATATACAGCAAATCTCATTGCCGCTTACGTTATGTATTGTTTTCA
AAGCGTAATGTTTCCTGTGCGGTGTCCTTTGAATTAGAGAACAATTTAAA
TGTTATGGTCCGACGTTTCCAGAGTAAACGCGTACGGCAAAAAATTCAAG
AGAATAAATGC
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Coding sequence (CDS) from alignment at KK037253.1:317528..318338-

>rna9447 ID=rna9447|Name=rna9447|organism=Nannochloropsis gaditana|type=CDS|length=311bp|location=Sequence derived from alignment at KK037253.1:317528..318338- (Nannochloropsis gaditana)
GGAAACAACATCAACTTGAAGAATCCGTGGACGACGCGGCGGATATTCGC
GCATTGTTGCGGGGAGAAATCCAAGGATTAATGAGGGGCTCCGCCGTTGG
GCGGGCCATTGTGCAGGAGCATCCGAAGGAATTGGCCATAATGGAGTCCT
GGGAAATCTTACCGGAGTTACGACCGACACCGCAGGGCGAAGTGTTCTGC
TTTCCTGTGCACGAAAATAGCGGTCTGGCTGAGACCCTGACTAAGTTTCT
CGCTCGAGAACGGGCGACGGGTTCTCTACAAAGCCTGCTGCGCAAGTATG
CTTTGGTTTGA
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Synonyms
Publications