EWM21256.1, cds9417 (CDS) Nannochloropsis gaditana

Overview
NameEWM21256.1
Unique Namecds9417
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:318028..318338 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21256.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101545g1.9945.mrna
GbkeyCDS
End range.
End range318338
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:318028..318338 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21256.1 vs. NCBI_GenBank
Match: gi|585101393|gb|EWM21256.1| (hypothetical protein Naga_101545g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 208.379 bits (529), Expect = 3.652e-68
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 
Query:    1 KQHQLEESVDDAADIRALLRGEIQGLMRGSAVGRAIVQEHPKELAIMESWEILPELRPTPQGEVFCFPVHENSGLAETLTKFLARERATGSLQSLLRKYALV 102
            KQHQLEESVDDAADIRALLRGEIQGLMRGSAVGRAIVQEHPKELAIMESWEILPELRPTPQGEVFCFPVHENSGLAETLTKFLARERATGSLQSLLRKYALV
Sbjct:    1 KQHQLEESVDDAADIRALLRGEIQGLMRGSAVGRAIVQEHPKELAIMESWEILPELRPTPQGEVFCFPVHENSGLAETLTKFLARERATGSLQSLLRKYALV 102
The following BLAST results are available for this feature:
BLAST of EWM21256.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101393|gb|EWM21256.1|3.652e-68100.00hypothetical protein Naga_101545g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9447rna9447Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications