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Properties
| Property Name | Value |
|---|
| Product | GNAT domain protein |
| Orig transcript id | gnl|cribi|Naga_100468g6.9409.mrna |
| Orig protein id | gnl|cribi|Naga_100468g6.9409 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037253.1 | supercontig | KK037253.1:221472..223606 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9419 ID=rna9419|Name=rna9419|organism=Nannochloropsis gaditana|type=mRNA|length=639bp
ATGCCACACATAAATGTAGATATTGCGGGCGTGTCCGACGGATCTAAGAG
CACGATGCCGACCGGATCAACCTCGATACACCAAGTCTTCACTTTCCTGG
TCCTGTGTTGGCTGTCGAGCGTGCAGGCGTTTTTGCCTTCGCGAGCGCCG
TCACCTCTCCTGACCTCAGGTGCTGGGCGTTTGCAACATCGAATCACCAC
CTCCACTGCCTCCCTATATCCTTCGCGCCCACTCACTACATTCCACTCAA
GCATCCAACACCGACTACGAGGGCAGCCATTGTATGGGATTTTTGGGCTT
GGCACTCCGGAGCTGGTGGTCATCGCCCTCGTGGCGGGCATTGTGCTGGG
GCCCGACAAGATCGTGGACCTGGCACGTGGCGTGGGCAAGGCGGCCGGGG
AGTTGAAAGCAGTGCCCCAGGAGTTTGAAAAGGGCCTCAAGAGTGGGGAG
GACGCAGCCGTCCAGACCAAGGCGGACCTGGCAAAGGAGGCGAAAGCAAA
AGCGGAGGCAGGGGCAAAGAAAGAAGGCGAAGAGAGGAAGGATGCCGCCG
CAGCCTGGTGCGGGGATCGATGGCCGGTAGTCTGCGCCTGGGATAGTGTC
CTGGGAGGGGTATGGGCAAGAAAAGGAGGAAGCGCGTAG back to topprotein sequence of rna9419 >rna9419-protein ID=rna9419-protein|Name=rna9419|organism=Nannochloropsis gaditana|type=polypeptide|length=571bp
MTSVTLPLSSPPRSPPPSSTPLALTYRTLRPEDLAEVKDLHEELFPVRYS
DAFYDCAVRGYLVGTCQPLFTLAAVEVLPEEGEERRERQGGRKMLQSIEE
ERNGVIQGDAGKRLLLRSRGLAPPPSFPSCFNSTGPSPPLSPPPSSSREG
RLLGIILAQLLPFSECAPDDADLLLPAPRLAHSLLPPLPTCPLPSPSTHA
LYILTLGTRPDARRQGLARSLLLRTLSQASLPPSPPPSPPSTPPSLPAPH
LGLVYLHVLPRNQSAIAFYVQQGFQCRGRLPRYYVINGKEEDAYLYVRYA
GQGGGEGGRKTGAMGWEEVGGSGGGWGERRWLGWVRSWEGWGERVWSWAS
LLVGWVKGGGKGGREGAREETEGPRGPCMLEEGREGGREGGEEGRTSGGV
SSENGACRVSTKCVGCTWEVAGDRPPRLGSRDVNIEGHGTSLGQVVSLRT
RDPHGPVYVRPPLATLHAGPARPARHAFLSLLSGVVASFSPPPSVLPSLP
PSPSPTARPPPPPILALLAGHRPRTCPLSSGTTTPLPGSRPPSFFLGSKP
PSPRLPLRMLRVGPEGRISGL back to topmRNA from alignment at KK037253.1:221472..223606+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9419 ID=rna9419|Name=rna9419|organism=Nannochloropsis gaditana|type=mRNA|length=2135bp|location=Sequence derived from alignment at KK037253.1:221472..223606+ (Nannochloropsis gaditana)
TCTTGCATTGAGGGGCCTCCATCTCGTAGGAGGGTAAGGCCGCGTTTCCT
GGCTTGTCACTTTCTCTGTTCTCGTCACTTACCACCTGCCCATGCGTCCA
TCGATACTTTCCACAGGATTGCAGCCTGCTGTTCTAtaaggaggacagga
aacAGGGGGTACCTCTCCCGATCGAATCCTTGGCCCAGAAGCAAGCTTTG
TGTATGCCAttatctccctcccacggctCCGCAACCTACTTCATCTCAAC
GCCCACGAGCACGTCcttgcagggaggaaggacagggagaagacgggcca
AGGATAGCTTGTCACGCATTCAAAGGCGAGCAAGACCGTCACCAGATTTG
CATGAAGCAGTAGTACAACTCTCTTAATTCTTCGCGAGGATCAATATGCT
GTGAAGACACCCCCTCTCCATGACCTccgtcaccctccccctttcgtccc
ctcctcgttccccccctccctcctccacgcccctcgccctcaccTACCGC
ACGCTGCGCCCCGAGGACCTGGCTGAGGTCAAGGATTTACACGAGGAACT
CTTTCCTGTCCGGTACTCAGACGCCTTCTACGACTGCGCGGTCCGTGGCT
ACTTGGTCGGGACTTGTCAGCCCCTGTTCACCCTGGCTGCCGTGGAGGTG
ctgccggaggagggggaggaaaggagggaaaggcagggcggaaggaagaT
GCTGCAGAGtatcgaggaggagcgaaatGGTGTGATCCAGGGAGACGCAG
GCAAGCGCCTTCTACTTCGGTCCCGGGGCCTcgcgccccctccgtccttt
ccctcctgcttcaACTCTAccggcccatcccctcctctttccccccctcc
ttcctcatcacgaGAAGGCCGACTGCTCGGCATCATCCTCGCCCagcttc
tccccttctccgaGTGTGCGCCGGACGACGCcgaccttctcctgcctgcG
CCCAGACTcgcccattccctccttccccccctacctacctgcccccttcc
ctccccatccaccCATGCCCTCTACATCCTCACGCTTGGGACCCGCCCGG
ACGCGCGCCGTCAGGGCCTGGcccgatccctcctccttcgcacgctctcc
caggcctccctccctccctctccccctccttcccctccttccacccctcc
ctccctgcctgccccccaCCTCGGCCTCGTCTACCTGCACGTCCTACCCC
GCAATCAGTCCGCCATCGCCTTTTATGTCCAGCAGGGCTTTCAATGTCGA
GGTCGATTGCCCCGCTACTATGTGATcaacgggaaggaggaggacgccta
TCTGTACGTGAGGTATgcagggcagggggggggggagggggggcggaaga
cGGGGGCGATGGGCTGGGAAGAAGTGGGAGgttcaggaggagggtggggg
gagaggaggtggctgGGATGGGTGAGGAgctgggaggggtggggtgAGAG
AGTGTGGTCATGGGCGTCGTTGTTGGTGGGGtgggtgaagggagggggaa
agggagggagggagggagcgagggaggagacagaggggcCGCGAGGGCCT
TGcatgctggaggaagggagggagggaggaagggagggaggggaggaagg
gcggacgTCTGGCGGTGTGAGTTCCGAAAACGGGGCATGTCGTGTCTCCA
CAAAGTGTGTAGGGTGTACATGGGAGGTGGCCGGTGATCGCCCACCCCGG
TTAGGGTCAAGGGATGTAAACATTGAAGGGCACGGAACGAGCCTCGGCCA
AGTAGTATCGTTGAGAACAAGGGATCCTCACGGCCCCGTATATGTCCGAC
CTCCTCTTGCCACCCTTCATGCCGGTCCGGCACGGCCGGCCCGTCacgct
tttctttcccttctttccggTGTCgttgcctctttttcccccccgccttc
cgtcctaccctccctcccgccctccccgagcCCTACggcccgtccccccc
cacctccaatCCTTGCACTACTTGCTGGGCACAGGCCTCGTACATGTCCA
CTAAGCTCCGGCACGACAACGCCGCTCCCTggttcccgccctccctcttt
ttttctcgGTAGCAAGCCACCATCTccgcggcttcctcttcgcatGCTAC
GGGTCGGGCCGGAGGGACGAATTTCCGGGCTTTGA back to topCoding sequence (CDS) from alignment at KK037253.1:221472..223606+ >rna9419 ID=rna9419|Name=rna9419|organism=Nannochloropsis gaditana|type=CDS|length=1716bp|location=Sequence derived from alignment at KK037253.1:221472..223606+ (Nannochloropsis gaditana)
ATGACCTccgtcaccctccccctttcgtcccctcctcgttccccccctcc
ctcctccacgcccctcgccctcaccTACCGCACGCTGCGCCCCGAGGACC
TGGCTGAGGTCAAGGATTTACACGAGGAACTCTTTCCTGTCCGGTACTCA
GACGCCTTCTACGACTGCGCGGTCCGTGGCTACTTGGTCGGGACTTGTCA
GCCCCTGTTCACCCTGGCTGCCGTGGAGGTGctgccggaggagggggagg
aaaggagggaaaggcagggcggaaggaagaTGCTGCAGAGtatcgaggag
gagcgaaatGGTGTGATCCAGGGAGACGCAGGCAAGCGCCTTCTACTTCG
GTCCCGGGGCCTcgcgccccctccgtcctttccctcctgcttcaACTCTA
ccggcccatcccctcctctttccccccctccttcctcatcacgaGAAGGC
CGACTGCTCGGCATCATCCTCGCCCagcttctccccttctccgaGTGTGC
GCCGGACGACGCcgaccttctcctgcctgcGCCCAGACTcgcccattccc
tccttccccccctacctacctgcccccttccctccccatccaccCATGCC
CTCTACATCCTCACGCTTGGGACCCGCCCGGACGCGCGCCGTCAGGGCCT
GGcccgatccctcctccttcgcacgctctcccaggcctccctccctccct
ctccccctccttcccctccttccacccctccctccctgcctgccccccaC
CTCGGCCTCGTCTACCTGCACGTCCTACCCCGCAATCAGTCCGCCATCGC
CTTTTATGTCCAGCAGGGCTTTCAATGTCGAGGTCGATTGCCCCGCTACT
ATGTGATcaacgggaaggaggaggacgcctaTCTGTACGTGAGGTATgca
gggcagggggggggggagggggggcggaagacGGGGGCGATGGGCTGGGA
AGAAGTGGGAGgttcaggaggagggtggggggagaggaggtggctgGGAT
GGGTGAGGAgctgggaggggtggggtgAGAGAGTGTGGTCATGGGCGTCG
TTGTTGGTGGGGtgggtgaagggagggggaaagggagggagggagggagc
gagggaggagacagaggggcCGCGAGGGCCTTGcatgctggaggaaggga
gggagggaggaagggagggaggggaggaagggcggacgTCTGGCGGTGTG
AGTTCCGAAAACGGGGCATGTCGTGTCTCCACAAAGTGTGTAGGGTGTAC
ATGGGAGGTGGCCGGTGATCGCCCACCCCGGTTAGGGTCAAGGGATGTAA
ACATTGAAGGGCACGGAACGAGCCTCGGCCAAGTAGTATCGTTGAGAACA
AGGGATCCTCACGGCCCCGTATATGTCCGACCTCCTCTTGCCACCCTTCA
TGCCGGTCCGGCACGGCCGGCCCGTCacgcttttctttcccttctttccg
gTGTCgttgcctctttttcccccccgccttccgtcctaccctccctcccg
ccctccccgagcCCTACggcccgtccccccccacctccaatCCTTGCACT
ACTTGCTGGGCACAGGCCTCGTACATGTCCACTAAGCTCCGGCACGACAA
CGCCGCTCCCTggttcccgccctccctctttttttctcgGTAGCAAGCCA
CCATCTccgcggcttcctcttcgcatGCTACGGGTCGGGCCGGAGGGACG
AATTTCCGGGCTTTGA back to top
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