EWM21284.1, cds9389 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21284.1 vs. NCBI_GenBank
Match: gi|585101448|gb|EWM21284.1| (GNAT domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1108.98 bits (2867), Expect = 0.000e+0 Identity = 571/571 (100.00%), Postives = 571/571 (100.00%), Query Frame = 0
Query: 1 MTSVTLPLSSPPRSPPPSSTPLALTYRTLRPEDLAEVKDLHEELFPVRYSDAFYDCAVRGYLVGTCQPLFTLAAVEVLPEEGEERRERQGGRKMLQSIEEERNGVIQGDAGKRLLLRSRGLAPPPSFPSCFNSTGPSPPLSPPPSSSREGRLLGIILAQLLPFSECAPDDADLLLPAPRLAHSLLPPLPTCPLPSPSTHALYILTLGTRPDARRQGLARSLLLRTLSQASLPPSPPPSPPSTPPSLPAPHLGLVYLHVLPRNQSAIAFYVQQGFQCRGRLPRYYVINGKEEDAYLYVRYAGQGGGEGGRKTGAMGWEEVGGSGGGWGERRWLGWVRSWEGWGERVWSWASLLVGWVKGGGKGGREGAREETEGPRGPCMLEEGREGGREGGEEGRTSGGVSSENGACRVSTKCVGCTWEVAGDRPPRLGSRDVNIEGHGTSLGQVVSLRTRDPHGPVYVRPPLATLHAGPARPARHAFLSLLSGVVASFSPPPSVLPSLPPSPSPTARPPPPPILALLAGHRPRTCPLSSGTTTPLPGSRPPSFFLGSKPPSPRLPLRMLRVGPEGRISGL 571
MTSVTLPLSSPPRSPPPSSTPLALTYRTLRPEDLAEVKDLHEELFPVRYSDAFYDCAVRGYLVGTCQPLFTLAAVEVLPEEGEERRERQGGRKMLQSIEEERNGVIQGDAGKRLLLRSRGLAPPPSFPSCFNSTGPSPPLSPPPSSSREGRLLGIILAQLLPFSECAPDDADLLLPAPRLAHSLLPPLPTCPLPSPSTHALYILTLGTRPDARRQGLARSLLLRTLSQASLPPSPPPSPPSTPPSLPAPHLGLVYLHVLPRNQSAIAFYVQQGFQCRGRLPRYYVINGKEEDAYLYVRYAGQGGGEGGRKTGAMGWEEVGGSGGGWGERRWLGWVRSWEGWGERVWSWASLLVGWVKGGGKGGREGAREETEGPRGPCMLEEGREGGREGGEEGRTSGGVSSENGACRVSTKCVGCTWEVAGDRPPRLGSRDVNIEGHGTSLGQVVSLRTRDPHGPVYVRPPLATLHAGPARPARHAFLSLLSGVVASFSPPPSVLPSLPPSPSPTARPPPPPILALLAGHRPRTCPLSSGTTTPLPGSRPPSFFLGSKPPSPRLPLRMLRVGPEGRISGL
Sbjct: 1 MTSVTLPLSSPPRSPPPSSTPLALTYRTLRPEDLAEVKDLHEELFPVRYSDAFYDCAVRGYLVGTCQPLFTLAAVEVLPEEGEERRERQGGRKMLQSIEEERNGVIQGDAGKRLLLRSRGLAPPPSFPSCFNSTGPSPPLSPPPSSSREGRLLGIILAQLLPFSECAPDDADLLLPAPRLAHSLLPPLPTCPLPSPSTHALYILTLGTRPDARRQGLARSLLLRTLSQASLPPSPPPSPPSTPPSLPAPHLGLVYLHVLPRNQSAIAFYVQQGFQCRGRLPRYYVINGKEEDAYLYVRYAGQGGGEGGRKTGAMGWEEVGGSGGGWGERRWLGWVRSWEGWGERVWSWASLLVGWVKGGGKGGREGAREETEGPRGPCMLEEGREGGREGGEEGRTSGGVSSENGACRVSTKCVGCTWEVAGDRPPRLGSRDVNIEGHGTSLGQVVSLRTRDPHGPVYVRPPLATLHAGPARPARHAFLSLLSGVVASFSPPPSVLPSLPPSPSPTARPPPPPILALLAGHRPRTCPLSSGTTTPLPGSRPPSFFLGSKPPSPRLPLRMLRVGPEGRISGL 571
BLAST of EWM21284.1 vs. NCBI_GenBank
Match: gi|568014458|gb|ETL88635.1| (hypothetical protein L917_12301 [Phytophthora parasitica]) HSP 1 Score: 116.701 bits (291), Expect = 2.895e-24 Identity = 90/292 (30.82%), Postives = 117/292 (40.07%), Query Frame = 0
Query: 18 SSTPLALTY-RTLRPEDLAEVKDLHEELFPVRYSDAFYDCAVRGYLVGTCQPLFTLAAVEVLPEEGEERRERQGGRKMLQSIEEERNGVIQGDAGKRLLLRSRGLAPPPSFPSCFNSTGPSPPLSPPPSSSREGRLLGIILAQLLPFSECAPDDADLLLPAPRLAHSLLPPLPTCPLPSPSTHALYILTLGTRPDARRQGLARSLLLRTLSQASLPPSPPPSPPSTPPSLPAPHLGLVYLHVLPRNQSAIAFYVQQGFQCRGRLPRYYVINGKEEDAYLYVRYAGQGGGEGG 308
+STP + Y R L D+ +V+ LHEE FP+RY+ AFYD A +G + T PLF AVE + P P + P+ P R+ +LG + A LP S+ DD DL+ P TH +YILTLGTR RR G+A LL ++QA P G VYLHV N SA FY + GFQ L YY+I+G DA+LY+RY + G
Sbjct: 35 TSTPERVIYFRDLNSWDIPQVRALHEEWFPIRYNQAFYDGAAQGMWMETGGPLFARLAVE--------------------------------------------MQPSPDLQT---------PVQPNLEDRRDENILGAVTASTLPLSKV--DDPDLI----------------SPDDWEHTHVMYILTLGTRSSVRRMGIASELLQECIAQAC----------------RQPQCGAVYLHVKADNLSARHFYEKNGFQNLRYLQDYYMIDGVRHDAFLYIRYVNGAAPQSG 239
BLAST of EWM21284.1 vs. NCBI_GenBank
Match: gi|566019040|gb|ETI41951.1| (hypothetical protein F443_12843 [Phytophthora parasitica P1569] >gi|568044673|gb|ETM41867.1| hypothetical protein L914_12381 [Phytophthora parasitica]) HSP 1 Score: 116.701 bits (291), Expect = 2.977e-24 Identity = 90/292 (30.82%), Postives = 117/292 (40.07%), Query Frame = 0
Query: 18 SSTPLALTY-RTLRPEDLAEVKDLHEELFPVRYSDAFYDCAVRGYLVGTCQPLFTLAAVEVLPEEGEERRERQGGRKMLQSIEEERNGVIQGDAGKRLLLRSRGLAPPPSFPSCFNSTGPSPPLSPPPSSSREGRLLGIILAQLLPFSECAPDDADLLLPAPRLAHSLLPPLPTCPLPSPSTHALYILTLGTRPDARRQGLARSLLLRTLSQASLPPSPPPSPPSTPPSLPAPHLGLVYLHVLPRNQSAIAFYVQQGFQCRGRLPRYYVINGKEEDAYLYVRYAGQGGGEGG 308
+STP + Y R L D+ +V+ LHEE FP+RY+ AFYD A +G + T PLF AVE + P P + P+ P R+ +LG + A LP S+ DD DL+ P TH +YILTLGTR RR G+A LL ++QA P G VYLHV N SA FY + GFQ L YY+I+G DA+LY+RY + G
Sbjct: 35 TSTPERVIYFRDLNSWDIPQVRALHEEWFPIRYNQAFYDGAAQGMWMETGGPLFARLAVE--------------------------------------------MQPSPDLQT---------PVQPNLEDRRDENILGAVTASTLPLSKV--DDPDLI----------------SPDDWEHTHVMYILTLGTRSSVRRMGIASELLQECIAQAC----------------RQPQCGAVYLHVKADNLSARHFYEKNGFQNLRYLQDYYMIDGVRHDAFLYIRYVNGAAPQSG 239
BLAST of EWM21284.1 vs. NCBI_GenBank
Match: gi|301110294|ref|XP_002904227.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262096353|gb|EEY54405.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 112.464 bits (280), Expect = 3.814e-24 Identity = 88/286 (30.77%), Postives = 114/286 (39.86%), Query Frame = 0
Query: 23 ALTYRTLRPEDLAEVKDLHEELFPVRYSDAFYDCAVRGYLVGTCQPLFTLAAVEVLPEEGEERRERQGGRKMLQSIEEERNGVIQGDAGKRLLLRSRGLAPPPSFPSCFNSTGPSPPLSPPPSSSREGRLLGIILAQLLPFSECAPDDADLLLPAPRLAHSLLPPLPTCPLPSPSTHALYILTLGTRPDARRQGLARSLLLRTLSQASLPPSPPPSPPSTPPSLPAPHLGLVYLHVLPRNQSAIAFYVQQGFQCRGRLPRYYVINGKEEDAYLYVRYAGQGGGEGG 308
+ +R L D+ +V+ LHEE FP+RY+ AFYD A +G + T PLF RL + R S P N P+ P P R+ +LG + A LP S+ DD DL+ P TH +YILTLGTR RR G+A LL ++QA P G VYLHV N SA FY + GFQ L YY+I+G DA+LY+RY + G
Sbjct: 17 VIYFRDLNSWDIPQVRALHEEWFPIRYNQAFYDGAAQGMWMETGGPLFA-----------------------------------------RLAVEMR------SSPDLQN------PVQPNPEDRRDENILGAVTASTLPLSKV--DDPDLI----------------SPDDWEHTHIMYILTLGTRSSVRRMGIASELLQECIAQAC----------------RQPQCGAVYLHVKADNVSARHFYEKNGFQNLRYLQDYYMIDGVRHDAFLYIRYVNGAAPQSG 215
BLAST of EWM21284.1 vs. NCBI_GenBank
Match: gi|635371277|emb|CCI40677.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 98.9821 bits (245), Expect = 6.547e-19 Identity = 86/299 (28.76%), Postives = 127/299 (42.47%), Query Frame = 0
Query: 10 SPPRSPPPSSTPLALTYRTLRPEDLAEVKDLHEELFPVRYSDAFYDCAVRGYLVGTCQPLFTLAAVEVL----PEEGEERRERQGGRKMLQSIEEERNGVIQGDAGKRLLLRSRGLAPPPSFPSCFNSTGPSPPLSPPPSSSREGRLLGIILAQLLPFSECAPDDADLLLPAPRLA-HSLLPPLPTCPLPSPSTHALYILTLGTRPDARRQGLARSLLLRTLSQASLPPSPPPSPPSTPPSLPAPHLGLVYLHVLPRNQSAIAFYVQQGFQCRGRLPRYYVINGKEEDAYLYVRYAGQG 303
SPP T L +R + ED+ ++ LHEE FP+RY+DAFY+ A T LFT L P + E +K+ +I E+RN ++G RSR ++ +++R+ R++G + A L+ + + +L P +L PP L A+YILTLGT+ RR+G+A LL + A PH VYLHV N AI FY + GFQ L YY+I G + AYL++ + +
Sbjct: 40 SPPSYDLAPDTEEVLFFREINQEDIPVLRRLHEEWFPIRYNDAFYNGAAHKRWAETGGALFTRVVTTRLTSPSPTDPEH------DQKLEINISEKRN-----ESG-----RSRHISE---------------------NAARDIRIIGAVTASLVSVTSIEEYEVRKILELPAFVPATLHPP----RLAEQDDLAMYILTLGTQQSYRRRGVASMLLSACIDNAR----------------QNPHCKAVYLHVKVDNIQAIHFYERNGFQNVKLLKNYYMIQGVPQHAYLFIYFLNRD 281
BLAST of EWM21284.1 vs. NCBI_GenBank
Match: gi|298706832|emb|CBJ25796.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 99.7525 bits (247), Expect = 1.327e-18 Identity = 89/313 (28.43%), Postives = 124/313 (39.62%), Query Frame = 0
Query: 24 LTYRTLRPEDLAEVKDLHEELFPVRYSDAFYDCAVRGYLV----GTCQPLFTLAAV------------------EVLPEEGEERRERQGGRKMLQ------------SIEEERNGVIQGDAGKRLLLRSRGLAPPPSFPSCFNSTGPSPPLSPPPSS---SREGRLLGIILAQLLPFSECAPDDADLLLPAPRLAHSLLPPLPTCPLPSPSTHALYILTLGTRPDARRQGLARSLLLRTLSQASLPPSPPPSPPSTPPSLPAPHLGLVYLHVLPRNQSAIAFYVQQGFQCRGRLPRYYVINGKEEDAYLYVRY 299
+ R + PEDL EVK LHE+ FPVRY AFY+ VRG++ +PL+T AV E P +G+ + + G + + E+ QG G R+ P P G L + R G + G+I Q++P S C D RL L + + +YILTLGT RRQG+ R+LL R + + S +G VYLHV+ N +A FY +GF + YY ING+ D YLY +
Sbjct: 1 MEMRPMEPEDLVEVKRLHEQCFPVRYDMAFYENVVRGFIARGKGDVEEPLYTQVAVVPPPADGCCGWPGSDSHAEECPADGDSPGQSETGEQSRRYPPHGGDVSGCGDAAEQGAATGQGCGGTERKGRA---TPGSGCPLADAGGGSEDSLDEGGADGGRERRGEIAGLITCQVMPLSRCRDQD--------RLG---LNTSYGGGGGAAHSEVVYILTLGTETRYRRQGIGRALLRRCVWLSRQEKS----------------IGAVYLHVITTNPAAHRFYESEGFVQVCCISDYYRINGELYDCYLYALF 283
BLAST of EWM21284.1 vs. NCBI_GenBank
Match: gi|1210518451|dbj|GAX22728.1| (hypothetical protein FisN_4Hh160 [Fistulifera solaris]) HSP 1 Score: 96.6709 bits (239), Expect = 3.379e-18 Identity = 93/331 (28.10%), Postives = 135/331 (40.79%), Query Frame = 0
Query: 3 SVTLPLSSPPRSPPP--SSTPL------ALTYRTLRPEDLAEVKDLHEELFPVRYSDAFYDCAVRGYLVGTCQPLFTLAAVEVLPEEGEERRERQGGRKMLQSIEEERNGVIQGDAGKRLLLRSRGLAPPPSFPSCFNSTGPSPPLSPPPSSSRE---GRLLGIILAQLLPFSECAPDDAD-------------LLLPAPRLAHSLLPP-LPTCPLPSPSTHA--LYILTLGTRPDARRQGLARSLLLRTLSQASLPPSPPPSPPSTPPSLPAPHLGLVYLHVLPRNQSAIAFYVQQGFQCRGRLPRYYVINGKEEDAYLYVRYAGQGGGE 306
++ P+++ PR PPP +TP L +R++ P D +++ LHEE FPV Y + FYD V G LV R +R+ ++ N VI + G L R P ++ +C + S + + E G G+ +A P S DD D + ++ +LPP L +P P H+ YI+TLGT D R GLA L+L+ + Q G +YLHVL N +AI FY + GF C +P YY I+GK YLY +Y G
Sbjct: 32 TIEEPVATTPRHPPPEKKTTPKRHRNFPGLYFRSILPIDRQQIQRLHEEWFPVEYQEKFYDTLVHGKLVTP-------------------RHDRRP---------KDENDVICDEDGA--LTR-----PLFTYLACVDDCATWNDDSNVNNDNEEYGSGGNEGVDVAVAQPDSTFTDDDIDEEKFDCTKEHRIAACIVGAKVELGVLPPNLRQLLVPQPHIHSKLFYIMTLGTADDYRGMGLASYLVLQCIQQEIENDQS---------------CGTLYLHVLDTNYAAIQFYEKLGFYCVRLIPNYYTIDGKLRHCYLYAKYFHGNTGH 312
BLAST of EWM21284.1 vs. NCBI_GenBank
Match: gi|1210521819|dbj|GAX19254.1| (hypothetical protein FisN_4Lh160 [Fistulifera solaris]) HSP 1 Score: 95.9005 bits (237), Expect = 5.831e-18 Identity = 86/304 (28.29%), Postives = 118/304 (38.82%), Query Frame = 0
Query: 24 LTYRTLRPEDLAEVKDLHEELFPVRYSDAFYDCAVRGYLV--------------------GTCQPLFT-LAAVEVLPEEGEERRERQGGRKMLQSIEEERNGVIQGDAGKRLLLRSRGLAPPPSFPSCFNSTGPSPPLSPPPSSSREGRLLGIILAQLLPFSECAPDDADLLLPAPRLAHSLLPPLPTCPLPSPSTHALYILTLGTRPDARRQGLARSLLLRTLSQASLPPSPPPSPPSTPPSLPAPHLGLVYLHVLPRNQSAIAFYVQQGFQCRGRLPRYYVINGKEEDAYLYVRYAGQGGGE 306
L +R++ P D +++ LHEE FPV Y + FYD V G LV +PLFT LA V+ ++ G GK + RG+A P N+ ++E R+ I+ + P+ LL+P P + HS L YI+TLGT D R GLA L+L+ + Q T S G +YLHVL N +AI FY + GF C +P YY I+GK YLY +Y G
Sbjct: 62 LYFRSILPIDRQQIQRLHEEWFPVEYQETFYDTLVHGKLVTPRHDRRPSDENDIICDEEGALTRPLFTYLACVDDCATLNDDSNVNNKTEDY-------------GSGGKDV--EDRGVAQP------VNTFTDDNIDEDKLVCTKEHRIAACIVGAKVELDVLPPNLRQLLVPQPHI-HSKL---------------FYIMTLGTADDYRGMGLASYLVLQCIEQ----------KIETDRSC-----GTLYLHVLDTNFAAIRFYEKLGFYCVRLIPNYYTIDGKLRHCYLYAKYFHGNTGH 313
BLAST of EWM21284.1 vs. NCBI_GenBank
Match: gi|695456473|ref|XP_009536962.1| (hypothetical protein PHYSODRAFT_529470 [Phytophthora sojae] >gi|348667571|gb|EGZ07396.1| hypothetical protein PHYSODRAFT_529470 [Phytophthora sojae]) HSP 1 Score: 90.5077 bits (223), Expect = 1.369e-16 Identity = 63/185 (34.05%), Postives = 81/185 (43.78%), Query Frame = 0
Query: 125 PSFPSCFNSTGPSPPLSPPPSSSR-EGRLLGIILAQLLPFSECAPDDADLLLPAPRLAHSLLPPLPTCPLPSPSTHALYILTLGTRPDARRQGLARSLLLRTLSQASLPPSPPPSPPSTPPSLPAPHLGLVYLHVLPRNQSAIAFYVQQGFQCRGRLPRYYVINGKEEDAYLYVRYAGQGGGEGG 308
P F PSP L P + R + +LG + A LP S+ DD DL+ P TH +YILTLGT+ RR G+A +LL ++QA P G VYLHV N SA FY + GFQ L YY+I+G DA+LY+RY + G
Sbjct: 63 PLFARLAVEMQPSPELVQPRAEDRRDEHILGAVTASTLPLSKV--DDPDLI----------------SPDDWEHTHIMYILTLGTKSSVRRMGIASALLQECIAQAC----------------RQPQCGAVYLHVKADNLSARHFYEKNGFQNLRYLQDYYMIDGVRHDAFLYIRYVNGAAPQSG 213
BLAST of EWM21284.1 vs. NCBI_GenBank
Match: gi|970635898|gb|KUF80685.1| (N-alpha-acetyltransferase 60 [Phytophthora nicotianae]) HSP 1 Score: 91.2781 bits (225), Expect = 3.545e-16 Identity = 60/178 (33.71%), Postives = 76/178 (42.70%), Query Frame = 0
Query: 131 FNSTGPSPPLSPPPSSSREGRLLGIILAQLLPFSECAPDDADLLLPAPRLAHSLLPPLPTCPLPSPSTHALYILTLGTRPDARRQGLARSLLLRTLSQASLPPSPPPSPPSTPPSLPAPHLGLVYLHVLPRNQSAIAFYVQQGFQCRGRLPRYYVINGKEEDAYLYVRYAGQGGGEGG 308
F P+ P R+ +LG + A LP S+ DD DL+ P TH +YILTLGTR RR G+A LL ++QA P G VYLHV N SA FY + GFQ L YY+I+G DA+LY+RY + G
Sbjct: 88 FARLAVEIPVQPNLEDRRDENILGAVTASTLPLSKV--DDPDLISPDDW----------------EHTHVMYILTLGTRSSVRRMGIASELLQECIAQAC----------------RQPQCGAVYLHVKADNLSARHFYEKNGFQNLRYLQDYYMIDGVRHDAFLYIRYVNGAAPQSG 231 The following BLAST results are available for this feature:
BLAST of EWM21284.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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