rna9410, rna9410 (mRNA) Nannochloropsis gaditana

Overview
Namerna9410
Unique Namerna9410
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length744
Alignment locationKK037253.1:201102..201940 -

Link to JBrowse

Properties
Property NameValue
Productatp-dependent chaperone protein
Orig transcript idgnl|cribi|Naga_101345g2.7067.mrna
Orig protein idgnl|cribi|Naga_101345g2.7067
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:201102..201940 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101345g2gene9130Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21294.1cds9380Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9410rna9410-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9410 ID=rna9410|Name=rna9410|organism=Nannochloropsis gaditana|type=mRNA|length=744bp
CACAGTCTTGTACCATTCTCCCACGGGCGGGGGTTCCGACCACACAGACG
ACCATACATACTTTCCCCTTGCCCCTTCCTCGAAAAAGCGTCACGCATGA
ACGGTGGCCGTCATCCCCGCCCATCCGGGGTCATCGCGCCAGATCAAGAC
CTGAACGATATACCCGAAGCCACGGTACTGTCAGGTCCCCCTACCGGAGG
GAATTCCCACGCAAGCACAAGTCATCAATCTACTATCCCCGCCGCCCAGA
TGGCGTACACTATTGCACAACCAACGCACCCCCCATCCCATCCCACTGCC
CCGTCGCCCATGGTCATGTACCCGACACAAGGAGGAGGGTACCCCCCTCG
ACAAGGCCCGGTTGTCGTTGACGACAGCGTCATGGCGCAGTACCTGGCCC
AACAGGGGGGGTCTGTCCCCCCCCCTCCTCCGGGGGGGGGAAGCTGTGAT
GAACGACGTTTCATAACATATCAAGCTCAACAGTCTGACGCCCCTAGTGG
GGCCTGGCGAGATCATGTCATCTTCTATTTCCTGAGCTCCCCCCCCTTTG
CCCCCCCCCCCTCCCTGCCAACCGTCCGTCTCCTCTACGGTCGGGGACAA
TACCTTCATGCCTACCTGGCCTCCCGACGTACCCGGGCCCTGGCCCTTCT
CTCCATTTTCACCGGCTCTTCCCTCCTCATCATGTATTTCCTCATGTCCC
GGCGACGGGGGAAAGCCGCGGGCGCGCTGGGCCACGATGGTTGA
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protein sequence of rna9410

>rna9410-protein ID=rna9410-protein|Name=rna9410|organism=Nannochloropsis gaditana|type=polypeptide|length=133bp
LGLKVEENVLHVLADLGYDPAYGARPLKRALQTAVLNPLATLLLEGRAKA
ESLLWLVRMPRREVREGRDLVIYGKGAIGGEEEGEGEEGLEGLLLGEDVL
VCRVVEGGFVEGGEKGGGEEGKEAGREREGEAA
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mRNA from alignment at KK037253.1:201102..201940-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9410 ID=rna9410|Name=rna9410|organism=Nannochloropsis gaditana|type=mRNA|length=839bp|location=Sequence derived from alignment at KK037253.1:201102..201940- (Nannochloropsis gaditana)
GTTGGGGCTTAAGGTGGAGGAGAACGTCCTCCATGTCCTCGCCGACCTGG GCTACGACCCTGCCTACGGCGCCCGCCCCTTGAAACGGGCGCTGCAAACT GCCGTTTTGAATCCGTTGGCGACCCTCCTCTTGGAGGGGCGGGCGAAGGC CGAGTCTCTCCTTTGGTTGGTTCGGATGCCACGAAGGGAGGTGCGGGAAG GGAGGGACCTGGTGATCTATGGGAAGGGTGCGATAGGAGGGGAGGAGGAG GGAGAGGGGGAGGAGGGGCTGGAGGGCTTGCTCCTGGGCGAGGACGTCCT TGTCTGCCGCGTGGTGGAGGGAGGATTTGTGGAAGGGGGGGAGAAGGGGG GGGGGGAGGAGGGGAAGGAGGCGGGAAGGGAGAGGGAGGGAGAGGCTGCA TAGATACTGAAGAGGGAAAAACGAGGGAGGGACAGATGGAGGGAAGGAGG GAGGAAAGATTTAAAGGACCTCACTGCCGCGAGGGGCGTGGCAAGGAAGC TTGGATAAGGAGGAAGCCGACAGGAAGGGAGGGATAAAGGTCTCGATAGA GGGTAGAATTTACAAAGCAGGAGAGTGTACAGGATTGTCATGCGTCGAGG AGCTGGGGGCAGAGAGGTGCTACCGAGTGACCTTTGTTTGGTCGAGGCCC CTCCGAAAGGGAGGTGAAAAGGAGCTTAAGGGCGGGGGGGATGGACACAT ATGGTGAGGAAAATCTTTGTCTTGGTTCTTGTTGACGTTTTCGAAAAGAA ACGGAGGTAACCCTGTCAATGTGCTGACGACTTCTTCGTAGGCGGTTGTA CGGCCATCGCCGGGGGATTGATCATTTCTTTCCACTACT
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Coding sequence (CDS) from alignment at KK037253.1:201102..201940-

>rna9410 ID=rna9410|Name=rna9410|organism=Nannochloropsis gaditana|type=CDS|length=402bp|location=Sequence derived from alignment at KK037253.1:201102..201940- (Nannochloropsis gaditana)
TTGGGGCTTAAGGTGGAGGAGAACGTCCTCCATGTCCTCGCCGACCTGGG
CTACGACCCTGCCTACGGCGCCCGCCCCTTGAAACGGGCGCTGCAAACTG
CCGTTTTGAATCCGTTGGCGACCCTCCTCTTGGAGGGGCGGGCGAAGGCC
GAGTCTCTCCTTTGGTTGGTTCGGATGCCACGAAGGGAGGTGCGGGAAGG
GAGGGACCTGGTGATCTATGGGAAGGGTGCGATAGGAGGGGAGGAGGAGG
GAGAGGGGGAGGAGGGGCTGGAGGGCTTGCTCCTGGGCGAGGACGTCCTT
GTCTGCCGCGTGGTGGAGGGAGGATTTGTGGAAGGGGGGGAGAAGGGGGG
GGGGGAGGAGGGGAAGGAGGCGGGAAGGGAGAGGGAGGGAGAGGCTGCAT
AG
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Synonyms
Publications