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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101091g3.8518.mrna |
| Orig protein id | gnl|cribi|Naga_101091g3.8518 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037253.1 | supercontig | KK037253.1:186792..188294 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9403 ID=rna9403|Name=rna9403|organism=Nannochloropsis gaditana|type=mRNA|length=1248bp
TTAAGACAGGTCCTGCCAGAGTTTGGGATGGTAGCCGCGGGACCCTGGGG
AGAGGATGGCCGCGCTCCCCCATGCAAGCTTCCAGGTAGAGGAGAGGAAG
CGCTGGATTCGAAGACTAAGCGGACGAGCAAAAGAGAGGAGCATGACGGC
CAGGATAAATGGACCGGATGGGCGCACGATGAAGGAAAACAAGGCGATGG
AAAGGACCGCAGGGTCGGGGAGGCTGGTGGTGGAGGGATGGACCTACCGG
AAGCGCCGGTTTTTTACCCCTCCTGGGAGGAGTTCACGGACCCCTTGGCA
TACATAGCCGCGTAAGTCTTTTCTCGCGCCTTTTTCCTTACAGTCAACCT
TCTCACACCCCACCTTCCACCCTCGCTCCCTCACCTCTTTCCTTCCCTCC
CTCAGCATTCGTCCCGTAGCCGAGCCCGCTGGGATCTGTCGCATCATCCC
CCCTCCCGGATGGGAGCCCCCTTGCGCCATCGATCCCGCCACATTCAAGT
TTCCCACCCGCGTGCAAAACCTCTCCCGCCTTGGGGCGTCGGCCCGCCTC
TCCAAGGACTTCGACAAGCTTCTCCGCCTCTTCATGTTCAAGCGCGGGAC
CCCCTTGGCAGGCCCGATCCCACGGCCCATGCTGGCCAAAGGCGCTAGCC
GGGCTCCGCCCCCCACCGCCCCGACAGCCAGGGCGTCACAGTCGGAGGAG
GACTTGCACCCTGTCCGACACCCGGAAAAGCCCGAGCACGCCGACGCGAG
GGCCACGGAAAAAACGGGGGAAGAGAAAATCCCGACAAGACCGGTCAGGC
CCCGTCGAGAAAAATACCGAAGCGGTACGGCTACGTCGGCTCCGGCCCCC
GGCCCGGCCCCTCCGGCCCTCTCTCCCCCCGCCCCCCCCCCCTTGAATTT
ATACGCCCTCTACAAGGCAGTGGTGACGAAGCGAGGAGGTTGGGCCCATG
TCGCCAGCACCGAGGCGTGGGAGGAGATCGCGGAGGAGGTCGGAGTGGAG
GGCGGGATGGGCCGACGTCTGCGAGCCTTGTACCGGGACATCATGAACCC
GTTCGAGGAATGGCAAGCTACCCGGAGGAAGGCCGTTACTCCGGCTCAGA
GCATTGCGAGTCCCGAGTCCGGTGCCGGTGGTTCTGAGAAGTGGGAGGGT
GGGGTACAGGGCGGGAGGGAGGCTGGGGTGGAGGGCGGGCGGGAGGGCGA
GGGGCAAGTGAGTTCCCCCCCCCCGGGCAAGCTGGAAGGGGGGGTCAA back to topprotein sequence of rna9403 >rna9403-protein ID=rna9403-protein|Name=rna9403|organism=Nannochloropsis gaditana|type=polypeptide|length=170bp
MTEPWLGAYQNVPLDGSREYLTPHQHETLHNFRQEQGTGWRFHIRQQWER
LSDRTALLFQGENSLRSVTSPFHALFQHRRSQLYLFAGLGLVALLLLLSL
LLPRPSSPPPGYPPLPVASPRTSIPPNLKPLPINQGAACLDLRRHTPPDG
QKFVQIHNRCSGEVIYPGTA back to topmRNA from alignment at KK037253.1:186792..188294+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9403 ID=rna9403|Name=rna9403|organism=Nannochloropsis gaditana|type=mRNA|length=1503bp|location=Sequence derived from alignment at KK037253.1:186792..188294+ (Nannochloropsis gaditana)
TACCAGAGCCCCGGGGTTGAAGCATGACAGAACCGTGGTTGGGTGCTTAC
CAAAATGTGCCCTTGGACGGCAGCCGGGAGTATCTGACGCCGCACCAACA
CGAGACTTTACACAACTTTCGGCAAGAACAAGGGACAGGGTGGCGCTTTC
ACATTCGTCAACAGTGGGAAAGGCTTTCAGGTATTTAAGAAGGGTCACTG
TAGTAAGCCATTCAACGTCGGGcctggggaaaaaaggaaaaggaggaaaa
acgtATAGTGGGGACGATGGGTCTGGCaagtgaaggaagaagcgccGGGA
CTGATATGTATGCGAGGACCCAAAAAAAGCATTGCACGCCTGCGACGTAA
CCGGTCGTACCAACAAGTAAGAAGACTCAAAGCATTCAATCGAGTGGATG
GCTTTCAAAAGCTTCTTGTGTGCTCGGGCCCGGGCAGGGCAgcccgggag
ggggggcacggcctCCGTGGTGGGAGGCGTGAGAAGGAGTTAGGTGCTTG
GAGACACCGGTGTTCGTATCAGGGCCATAGCCAGGCTTTCACCTCCATTA
TCGTCTTTGTAACACCACCCCTcaacccccctccttcccccagatcgcac
cgccctcctcttccagggcgAAAACAGCCTTCGGTCCgtcacctcccctt
tccacgccctcttccaACACCGACGCTCTCAACTCTACCTCTTCGCCGGC
CTTGGCCTtgtggccctcctcctcctcctctccctcctcctcccccgtcc
ttcctccccccccccgggatacccgcccttgcccgtcgcctccccccgca
cctccatcccccccaaCCTTAAGCCCCTCCCGATCAATCAGGGCGCTGCT
TGCCTCGACCTGCGCCGGCACACGCCCCCCGATGGCCAGAAATTTGTTCA
GATCCACAACCGGTGCAGTGGGGAGGTGATCTACCCCGGTAAGGAacggc
tggagggagggggtagacccgcctccctctctctttcctccttccctcct
tcccttccatttcACCTACttgcccccttcccttcctcccaccctgtAAA
ACGATGCCTTTCGCccactctcccccctcttaaTTACCTTGCATCGAAAT
GACGAcgaaccctccctccctccctccccccccaaggcATGATCGGCCAA
GGCGGCTCAAGCGTTCCCCCCGTCTGGCTGGAGGCCACGGCAGAAGGCGG
GATAGAGggcaggcaggagaaagggtGGCGCTTGGAGCCCGGCGACTGCC
GGACACTGACCATCCCCGCCACCTTCCCAAGCCTGCGCCTCTGGGGTCGG
ACGGGATGTAACGGCTCGACCGTTACGGATTTTAAATGTCAAACCGGGTA
ACCGCCGTTTGTTGGGGCCAGACTGGGGGCTTTGAAAGCGTGAGACTCAT
CCGAAGGCCTGTGCTGCTTTGCACGCGCGCCCtgatccccctcctccctc
cctccctccatccctccctcccgccctccctccctcccacaggGACTGCG
TGA back to topCoding sequence (CDS) from alignment at KK037253.1:186792..188294+ >rna9403 ID=rna9403|Name=rna9403|organism=Nannochloropsis gaditana|type=CDS|length=1539bp|location=Sequence derived from alignment at KK037253.1:186792..188294+ (Nannochloropsis gaditana)
ATGACAGAACCGTGGTTGGGTGCTTACCAAAATGTGCCCTTGGACGGCAG
CCGGGAGTATCTGACGCCGCACCAACACGAGACTTTACACAACTTTCGGC
AAGAACAAGGGACAGGGTGGCGCTTTCACATTCGTCAACAGTGGGAAAGG
CTTTCAGatcgcaccgccctcctcttccagggcgAAAACAGCCTTCGGTC
CgtcacctcccctttccacgccctcttccaACACCGACGCTCTCAACTCT
ACCTCTTCGCCGGCCTTGGCCTtgtggccctcctcctcctcctctccctc
ctcctcccccgtccttcctccccccccccgggatacccgcccttgcccgt
cgcctccccccgcacctccatcccccccaaCCTTAAGCCCCTCCCGATCA
ATCAGGGCGCTGCTTGCCTCGACCTGCGCCGGCACACGCCCCCCGATGGC
CAGAAATTTGTTCAGATCCACAACCGGTGCAGTGGGGAGGTGATCTACCC
CGgGACTGCGTGAATGACAGAACCGTGGTTGGGTGCTTACCAAAATGTGC
CCTTGGACGGCAGCCGGGAGTATCTGACGCCGCACCAACACGAGACTTTA
CACAACTTTCGGCAAGAACAAGGGACAGGGTGGCGCTTTCACATTCGTCA
ACAGTGGGAAAGGCTTTCAGatcgcaccgccctcctcttccagggcgAAA
ACAGCCTTCGGTCCgtcacctcccctttccacgccctcttccaACACCGA
CGCTCTCAACTCTACCTCTTCGCCGGCCTTGGCCTtgtggccctcctcct
cctcctctccctcctcctcccccgtccttcctccccccccccgggatacc
cgcccttgcccgtcgcctccccccgcacctccatcccccccaaCCTTAAG
CCCCTCCCGATCAATCAGGGCGCTGCTTGCCTCGACCTGCGCCGGCACAC
GCCCCCCGATGGCCAGAAATTTGTTCAGATCCACAACCGGTGCAGTGGGG
AGGTGATCTACCCCGgGACTGCGTGAATGACAGAACCGTGGTTGGGTGCT
TACCAAAATGTGCCCTTGGACGGCAGCCGGGAGTATCTGACGCCGCACCA
ACACGAGACTTTACACAACTTTCGGCAAGAACAAGGGACAGGGTGGCGCT
TTCACATTCGTCAACAGTGGGAAAGGCTTTCAGatcgcaccgccctcctc
ttccagggcgAAAACAGCCTTCGGTCCgtcacctcccctttccacgccct
cttccaACACCGACGCTCTCAACTCTACCTCTTCGCCGGCCTTGGCCTtg
tggccctcctcctcctcctctccctcctcctcccccgtccttcctccccc
cccccgggatacccgcccttgcccgtcgcctccccccgcacctccatccc
ccccaaCCTTAAGCCCCTCCCGATCAATCAGGGCGCTGCTTGCCTCGACC
TGCGCCGGCACACGCCCCCCGATGGCCAGAAATTTGTTCAGATCCACAAC
CGGTGCAGTGGGGAGGTGATCTACCCCGgGACTGCGTGA back to top
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