EWM21301.1, cds9373 (CDS) Nannochloropsis gaditana

Overview
NameEWM21301.1
Unique Namecds9373
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:186815..186971 +
Alignment locationKK037253.1:187385..187729 +
Alignment locationKK037253.1:188284..188294 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21301.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101091g3.8518.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:186815..186971 +
KK037253.1supercontigKK037253.1:187385..187729 +
KK037253.1supercontigKK037253.1:188284..188294 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM21301.1 vs. NCBI_GenBank
Match: gi|585101476|gb|EWM21301.1| (hypothetical protein Naga_101091g3 [Nannochloropsis gaditana])

HSP 1 Score: 345.125 bits (884), Expect = 3.050e-120
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 
Query:    1 MTEPWLGAYQNVPLDGSREYLTPHQHETLHNFRQEQGTGWRFHIRQQWERLSDRTALLFQGENSLRSVTSPFHALFQHRRSQLYLFAGLGLVALLLLLSLLLPRPSSPPPGYPPLPVASPRTSIPPNLKPLPINQGAACLDLRRHTPPDGQKFVQIHNRCSGEVIYPGTA 170
            MTEPWLGAYQNVPLDGSREYLTPHQHETLHNFRQEQGTGWRFHIRQQWERLSDRTALLFQGENSLRSVTSPFHALFQHRRSQLYLFAGLGLVALLLLLSLLLPRPSSPPPGYPPLPVASPRTSIPPNLKPLPINQGAACLDLRRHTPPDGQKFVQIHNRCSGEVIYPGTA
Sbjct:    1 MTEPWLGAYQNVPLDGSREYLTPHQHETLHNFRQEQGTGWRFHIRQQWERLSDRTALLFQGENSLRSVTSPFHALFQHRRSQLYLFAGLGLVALLLLLSLLLPRPSSPPPGYPPLPVASPRTSIPPNLKPLPINQGAACLDLRRHTPPDGQKFVQIHNRCSGEVIYPGTA 170
The following BLAST results are available for this feature:
BLAST of EWM21301.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101476|gb|EWM21301.1|3.050e-120100.00hypothetical protein Naga_101091g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9403rna9403Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications