rna9400, rna9400 (mRNA) Nannochloropsis gaditana

Overview
Namerna9400
Unique Namerna9400
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length746
Alignment locationKK037253.1:179348..181647 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100350g1.4389.mrna
Orig protein idgnl|cribi|Naga_100350g1.4389
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:179348..181647 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100350g1gene9120Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21303.1cds9370Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9400rna9400-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9400 ID=rna9400|Name=rna9400|organism=Nannochloropsis gaditana|type=mRNA|length=746bp
CCATCATTTATACCCTCCCTGCTCGCATTTCAGAGCACACAGGGATCTGC
TAACACGCTTTCAACCAATCCTGTCGTTCGTGCAAAGACTGTGTTGAGCC
ATATGACCCTCTCCTCCTCCCCGCCTGCTTCCTCTCCACCATCTGATACC
GCCACTGAAAGCGAACTCGACGTCCTCGGTCGCGACCTGTCCGGATGCGT
TCTTGAGCAATACGTGTTTACGATTATGGGGATAGGACTGGGCACGGGCA
TGAGTGTACACAGAAAAAGCTTTTTCCCATTAGTGGCATGGGGGGCCGCA
GGAAGCATTGGAGACTTGATGTATGGCTTGGGGTACGCATGCAAAGGGCA
ATATGACGCATATAAAGCTTGTCGGAACAAATTACATCGACCCCAGGTCC
CACCAATCACTCCCCCTCCATCGCTTGGCTGAAATCCTCCTTCTTCCTCC
GCCCCCCCCCTCCTCCTCTCCCACCTCGCTCTTGTTGTTGGAGAGCCTTG
GTCGTCCTTTGCTGTGCAGGGCGTTGTGCATGATGATAAAGGGGAAAAAA
ATACCGCCAGGGTGACGAGAGCGAAAACGCTTTCCTAACGCTGAGGGCCA
TGCTCCCCTGTTACCTATCACTTCTTTTTACCTCCCCATGCTCGTATTTC
CTCGTGCATGGGTGAGAGGAGGTCTCGCTCTTTCCTTCACGACGGTATCA
ATTCATTACCATCACTCAGGCAATGACGGCCCCGACGTCAGCGAAG
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protein sequence of rna9400

>rna9400-protein ID=rna9400-protein|Name=rna9400|organism=Nannochloropsis gaditana|type=polypeptide|length=487bp
GRRKEGGEEEERGRGRRRKLRKGVGAPQMKSSDTPTPSFRHPLTEEASPT
SLETVAFNAFLQRLTDAAETASALFAAPPLPPSPSGLPAWCRRPSPSHLL
NLWKRGKELGAPRTEMRALERALEKARTNTEKALNLLPRGTAKRGPLRLH
HLRRDQRQDELGSEPPSLLPPLAPPLSLEGLLNLLLDLLAFPLRLHQPVA
AAFRLLAEVTRLRREVWTLLGLSLPPSLPPARPPSRPPSDPALLSFLTLE
RCVRDALRLLCSTCAQPEDAPSSLTLPSSSSSPSSFSGAPRIYPQGLPPA
LRLPSHHPGDGGKQAGMKGGKWKGRRLCYFPGPDFFWGVSHLKEGLRLLR
VAGVPEWEALEECERREEEEEAKRQGGRRKGGRKRKREGREGDGIGRDGG
RGEVEGMVVRVRRLEVPPFKWVVVGLMGREEKRKEGGTVGGMQRAKERAK
REGHEGKGGVVQLAMKEEGRGRQKSSLGWGGDEEGGG
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mRNA from alignment at KK037253.1:179348..181647-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9400 ID=rna9400|Name=rna9400|organism=Nannochloropsis gaditana|type=mRNA|length=2300bp|location=Sequence derived from alignment at KK037253.1:179348..181647- (Nannochloropsis gaditana)
GGGAGGAGGAAGGAGGGAGGGGAAGAGGAGGAGCGGGGACGCGGGAGGAG
GCGGAAGCTGAGGAAAGGAGTCGGCGCCCCCCAAATGAAATCTTCGGACA
CTCCCACTCCTTCCTTCCGCCATCCCCTAACGGAGGAGGCCAGCCCCACC
TCCCTGGAAACGGTTGCATTCAACGCTTTTCTCCAACGGCTCACCGATGC
GGCTGAAACCGCCAGCGCCCTCTTCGCCGCCCCTCCCCTTCCTCCGTCCC
CCTCCGGGCTTCCCGCCTGGTGCCGACGTCCTTCCCCCTCCCACCTCCTT
AACTTGTGGAAGCGCGGGAAGGAGCTGGGCGCGCCGCGGACGGAGATGCG
GGCCTTGGAACGGGCATTGGAAAAAGCCCGAACCAACACGGAGAAGGCGC
TGAACCTCCTCCCCCGCGGCACTGCCAAACGAGGGCCCCTCCGCCTCCAT
CACCTGCGCCGGGACCAGCGGCAGGACGAGCTCGGCTCAGAACCTCCTTC
CCTCCTTCCTCCCCTGGCTCCTCCCCTCTCTCTCGAAGGTCTCCTGAACC
TCCTCCTCGACCTCCTCGCTTTCCCCCTCCGCCTCCATCAGCCCGTGGCC
GCCGCCTTTCGCCTCCTCGCTGAAGTGACCCGCCTCCGCCGGGAGGTCTG
GACGCTCCTTGGCCTTTCCCTCCCTCCCTCCCTCCCCCCCGCCCGCCCTC
CCTCCCGCCCGCCCTCCGATCCGGCCCTCTTGTCCTTCCTCACTCTGGAG
CGCTGTGTCAGGGACGCACTGCGCCTTCTCTGCTCGACTTGCGCCCAACC
AGAGGATGCCCCCTCTTCCTTAACCCTTCCCTCCTCCTCCTCTTCCCCAT
CCTCCTTCTCCGGCGCCCCCCGGATCTACCCCCAGGGCCTGCCTCCCGCC
CTCCGCCTCCCCTCCCATCACCCCGGCGACGGAGGGAAGCAGGCAGGCAT
GAAGGGAGGGAAGTGGAAGGGGAGGAGGTTGTGCTATTTTCCCGGGCCCG
ACTTTTTCTGGGGCGTAAGCCACCTAAAGGAGGGCTTGAGGCTCTTGAGG
GTTGCGGGTGTGCCGGAGTGGGAGGCGTTGGAGGAATGTGAACGGAGGGA
GGAGGAGGAGGAGGCAAAGAGGCAGGGAGGGCGACGGAAGGGAGGGAGGA
AGAGGAAGCGGGAAGGCCGGGAGGGTGATGGGATCGGAAGGGATGGCGGG
CGGGGGGAGGTCGAGGGGATGGTGGTGAGGGTGAGGAGGCTGGAGGTTCC
GCCCTTCAAGTGGGTGGTCGTGGGGCTGATGGGGAGGGAAGAGAAGAGGA
AGGAGGGCGGGACGGTGGGGGGCATGCAGCGCGCGAAGGAAAGGGCGAAA
AGGGAAGGGCACGAAGGGAAAGGCGGGGTGGTGCAGTTGGCGATGAAGGA
GGAGGGGCGAGGGCGTCAGAAAAGTTCTCTTGGTTGGGGAGGTGACGAGG
AGGGAGGGGGATAGAGATGGGGAGGACAGGAGGGAGGGGACGATGGAGGT
TCCGGAGGCTGCGGTGGTCACCTCTGCGACGGCATGGAGTGAACGGAAGG
GAAGGAAGGAGGAGGGAGTTAGAAGCGAGATGAAGGAGGGACAAGGAGGG
AGTCGAGTGAAGGAGGGAGGTAGAGGGAGGCAGGAGGAGAAAGCGATTGG
GGAGGAAATGAGGTGGCCAAGCGATGAGGAGGGGGGCAGGAGATTGAAGA
AGAAGGAAGTCAGATCGCGTTTCCCTCCGAGAGAGACTGATGCACATTGC
GCGTGGGAGGGTTTGAAAAAATGGGATGCGGAAGCGGCTGAGTACAGGGG
CCGTGGAGGTTGATGCCCGCAGGTGCGATCTTCTGGGCCAGGGGCGTCAT
CCGGCGCAGGCCTTGGAGGTGTGATGAGGAGGGAAGGCCTTTCAGGGTGA
TGAAGAAAGAGAGTGAAATGAAACGACAGGCGGGGGCCGGAAGGTTGTGT
GCATATTGGTTCATGGGGTGGATAGAGAGGAGGAAGGAGGGGAGTATCGA
GGGAGGGATCGAGGGACGCCTTTCTTCGCTGACGTCGGGGCCGTCATTGC
CTGAGTGATGGTAATGAATTGATACCGTCGTGAAGGAAAGAGCGAGACCT
CCTCTCACCCATGCACGAGGAAATACGAGCATGGGGAGGTAAAAAGAAGT
GATAGGTAACAGGGGAGCATGGCCCTCAGCGTTAGGAAAGCGTTTTCGCT
CTCGTCACCCTGGCGGTATTTTTTTCCCCTTTATCATCATGCACAACGCC
CTGCACAGCAAAGGACGACCAAGGCTCTCCAACAACAAGAGCGAGGTGGG
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Coding sequence (CDS) from alignment at KK037253.1:179348..181647-

>rna9400 ID=rna9400|Name=rna9400|organism=Nannochloropsis gaditana|type=CDS|length=1464bp|location=Sequence derived from alignment at KK037253.1:179348..181647- (Nannochloropsis gaditana)
GGGAGGAGGAAGGAGGGAGGGGAAGAGGAGGAGCGGGGACGCGGGAGGAG
GCGGAAGCTGAGGAAAGGAGTCGGCGCCCCCCAAATGAAATCTTCGGACA
CTCCCACTCCTTCCTTCCGCCATCCCCTAACGGAGGAGGCCAGCCCCACC
TCCCTGGAAACGGTTGCATTCAACGCTTTTCTCCAACGGCTCACCGATGC
GGCTGAAACCGCCAGCGCCCTCTTCGCCGCCCCTCCCCTTCCTCCGTCCC
CCTCCGGGCTTCCCGCCTGGTGCCGACGTCCTTCCCCCTCCCACCTCCTT
AACTTGTGGAAGCGCGGGAAGGAGCTGGGCGCGCCGCGGACGGAGATGCG
GGCCTTGGAACGGGCATTGGAAAAAGCCCGAACCAACACGGAGAAGGCGC
TGAACCTCCTCCCCCGCGGCACTGCCAAACGAGGGCCCCTCCGCCTCCAT
CACCTGCGCCGGGACCAGCGGCAGGACGAGCTCGGCTCAGAACCTCCTTC
CCTCCTTCCTCCCCTGGCTCCTCCCCTCTCTCTCGAAGGTCTCCTGAACC
TCCTCCTCGACCTCCTCGCTTTCCCCCTCCGCCTCCATCAGCCCGTGGCC
GCCGCCTTTCGCCTCCTCGCTGAAGTGACCCGCCTCCGCCGGGAGGTCTG
GACGCTCCTTGGCCTTTCCCTCCCTCCCTCCCTCCCCCCCGCCCGCCCTC
CCTCCCGCCCGCCCTCCGATCCGGCCCTCTTGTCCTTCCTCACTCTGGAG
CGCTGTGTCAGGGACGCACTGCGCCTTCTCTGCTCGACTTGCGCCCAACC
AGAGGATGCCCCCTCTTCCTTAACCCTTCCCTCCTCCTCCTCTTCCCCAT
CCTCCTTCTCCGGCGCCCCCCGGATCTACCCCCAGGGCCTGCCTCCCGCC
CTCCGCCTCCCCTCCCATCACCCCGGCGACGGAGGGAAGCAGGCAGGCAT
GAAGGGAGGGAAGTGGAAGGGGAGGAGGTTGTGCTATTTTCCCGGGCCCG
ACTTTTTCTGGGGCGTAAGCCACCTAAAGGAGGGCTTGAGGCTCTTGAGG
GTTGCGGGTGTGCCGGAGTGGGAGGCGTTGGAGGAATGTGAACGGAGGGA
GGAGGAGGAGGAGGCAAAGAGGCAGGGAGGGCGACGGAAGGGAGGGAGGA
AGAGGAAGCGGGAAGGCCGGGAGGGTGATGGGATCGGAAGGGATGGCGGG
CGGGGGGAGGTCGAGGGGATGGTGGTGAGGGTGAGGAGGCTGGAGGTTCC
GCCCTTCAAGTGGGTGGTCGTGGGGCTGATGGGGAGGGAAGAGAAGAGGA
AGGAGGGCGGGACGGTGGGGGGCATGCAGCGCGCGAAGGAAAGGGCGAAA
AGGGAAGGGCACGAAGGGAAAGGCGGGGTGGTGCAGTTGGCGATGAAGGA
GGAGGGGCGAGGGCGTCAGAAAAGTTCTCTTGGTTGGGGAGGTGACGAGG
AGGGAGGGGGATAG
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Synonyms
Publications