EWM21303.1, cds9370 (CDS) Nannochloropsis gaditana

Overview
NameEWM21303.1
Unique Namecds9370
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:180184..181647 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21303.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100350g1.4389.mrna
GbkeyCDS
End range.
End range181647
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:180184..181647 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21303.1 vs. NCBI_GenBank
Match: gi|585101482|gb|EWM21303.1| (hypothetical protein Naga_100350g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 942.954 bits (2436), Expect = 0.000e+0
Identity = 487/487 (100.00%), Postives = 487/487 (100.00%), Query Frame = 0 
Query:    1 GRRKEGGEEEERGRGRRRKLRKGVGAPQMKSSDTPTPSFRHPLTEEASPTSLETVAFNAFLQRLTDAAETASALFAAPPLPPSPSGLPAWCRRPSPSHLLNLWKRGKELGAPRTEMRALERALEKARTNTEKALNLLPRGTAKRGPLRLHHLRRDQRQDELGSEPPSLLPPLAPPLSLEGLLNLLLDLLAFPLRLHQPVAAAFRLLAEVTRLRREVWTLLGLSLPPSLPPARPPSRPPSDPALLSFLTLERCVRDALRLLCSTCAQPEDAPSSLTLPSSSSSPSSFSGAPRIYPQGLPPALRLPSHHPGDGGKQAGMKGGKWKGRRLCYFPGPDFFWGVSHLKEGLRLLRVAGVPEWEALEECERREEEEEAKRQGGRRKGGRKRKREGREGDGIGRDGGRGEVEGMVVRVRRLEVPPFKWVVVGLMGREEKRKEGGTVGGMQRAKERAKREGHEGKGGVVQLAMKEEGRGRQKSSLGWGGDEEGGG 487
            GRRKEGGEEEERGRGRRRKLRKGVGAPQMKSSDTPTPSFRHPLTEEASPTSLETVAFNAFLQRLTDAAETASALFAAPPLPPSPSGLPAWCRRPSPSHLLNLWKRGKELGAPRTEMRALERALEKARTNTEKALNLLPRGTAKRGPLRLHHLRRDQRQDELGSEPPSLLPPLAPPLSLEGLLNLLLDLLAFPLRLHQPVAAAFRLLAEVTRLRREVWTLLGLSLPPSLPPARPPSRPPSDPALLSFLTLERCVRDALRLLCSTCAQPEDAPSSLTLPSSSSSPSSFSGAPRIYPQGLPPALRLPSHHPGDGGKQAGMKGGKWKGRRLCYFPGPDFFWGVSHLKEGLRLLRVAGVPEWEALEECERREEEEEAKRQGGRRKGGRKRKREGREGDGIGRDGGRGEVEGMVVRVRRLEVPPFKWVVVGLMGREEKRKEGGTVGGMQRAKERAKREGHEGKGGVVQLAMKEEGRGRQKSSLGWGGDEEGGG
Sbjct:    1 GRRKEGGEEEERGRGRRRKLRKGVGAPQMKSSDTPTPSFRHPLTEEASPTSLETVAFNAFLQRLTDAAETASALFAAPPLPPSPSGLPAWCRRPSPSHLLNLWKRGKELGAPRTEMRALERALEKARTNTEKALNLLPRGTAKRGPLRLHHLRRDQRQDELGSEPPSLLPPLAPPLSLEGLLNLLLDLLAFPLRLHQPVAAAFRLLAEVTRLRREVWTLLGLSLPPSLPPARPPSRPPSDPALLSFLTLERCVRDALRLLCSTCAQPEDAPSSLTLPSSSSSPSSFSGAPRIYPQGLPPALRLPSHHPGDGGKQAGMKGGKWKGRRLCYFPGPDFFWGVSHLKEGLRLLRVAGVPEWEALEECERREEEEEAKRQGGRRKGGRKRKREGREGDGIGRDGGRGEVEGMVVRVRRLEVPPFKWVVVGLMGREEKRKEGGTVGGMQRAKERAKREGHEGKGGVVQLAMKEEGRGRQKSSLGWGGDEEGGG 487
The following BLAST results are available for this feature:
BLAST of EWM21303.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101482|gb|EWM21303.1|0.000e+0100.00hypothetical protein Naga_100350g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9400rna9400Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications