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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100350g5.4392.mrna |
| Orig protein id | gnl|cribi|Naga_100350g5.4392 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037253.1 | supercontig | KK037253.1:171057..173073 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9397 ID=rna9397|Name=rna9397|organism=Nannochloropsis gaditana|type=mRNA|length=1756bp
ATCATCTCATCTCATATTTCTTATTTTACCCATCACACAGCCTTTTTGGG
GAACCCTCGGGCCCTCTCAGCGTCCTGAGTCCCCCACCCATACGTGGCAA
AGCCATCCCCGTTAACCTCCCCCCCCTGGGCCATCCATGTGCCTGTAACG
CTTGCACGAACACGCCGAGCACACGGCATTCGCAGCGTTTGCCTCGATTC
TTGGCTATCGGCTCCTGTATTTTCTGTTACTGCTTAACGAAAAAGGGCCC
AGTTGCTTGCACTCGGTCGCCACGGAGCTCCCACCCGAGGCCTCCGTCCT
ACGACCCCCACGTCGGGCCTCCCGTGCAAGCACGCGTGGCATACGGGCAG
ACTCAAGAAGCATTTCGTACACTCATATTGACAAGATTGAAGGATGCCTC
GGTATCTAGTCACTTTCGTGTATCGTCTGCTCGATTTTCGATTTGCGGAG
TTGGATGCCATCCTCGATATGCTCTGCCTGGACCCCGCCGCTGTGTACGC
TCCTTCCCCCCCGGAAATCAGGCTCAACAATTACTCACACCTATTCGTTG
ACCTCCCTTCTGAGGCCGTAGCTGTAGAGATCCAACAGCGGGCCGTTCTG
GTCGAGAGCGTCCTGGAGCTCTGGGGTGAGGGCCGTACCTATGAAGAGTT
GGACGCCAGCCTGCTGTCCCTCTCCGACGATGTCCTCGCCCCTTACATGC
GGCCGAAGATGACCTGGTCGTTGATGGTGGCGGGCTCGGGCAAAACCCTG
AGCATGGCTGCCCAAGACACTGCCCGCTACCGTGTCCTGGCCTCCATCCC
TTTCCCGGGGCCCATTCAGTTGAAGCAGCCGCAAGAGACTTTCTGGCTGA
TCGACCACGTCGCCAACGACACCGACCCGACGCCCGACCACCTCTACTTC
GGTCGCGCCATCACCTCCCGGGCTTCCCGTGGCCGGGAGCGTGTCGGGAA
AGGGGACTTGAAGCGGCGGGCTTATCTGGGACCGACCTCTCTGGACAACG
AACTCGCCCTGCTCATGGCGAGCTTCGCGCAAATCCGACCCGGAAGTATG
GTGTTGGACCCTTTTGTGGGCACGGGCTCTATTCTGGTGGCCTGCACCCA
GTTTGGGGCCTTTTGTGTGGGCACCGACATCGACATCCGGGTCTTGCGGG
GGAAGGAGGAGGGACGCAACGTCTATGCGAATTTCACCCAGTACGGGCTA
CGCTACCCGGAGCTGGTTCGGAGCGATAACGCGCTGTATGCCGGGCACTT
CCGCCAGGTGGCTCTGTACGACGCCATTGTCTGCGACCCCCCCTACGGGA
TCCGGGCGGGGGCTCGGCGTTCCGGCAGCCGTCGGGAGCAAGTGCGGCCT
GTGCCAGCCCATCTCCGAGCCGACCACATCCCCCAAACCAGGCCCTACCC
GATGCGCGACGTGCTTGACGACCTCCTCCAAGTGGCGTCGACCGCCCTGA
GGGCGGGAGGGAGGTTGGTCTACCTGCTTCCCTGCGAGGTAGGGCCCGAG
GCCGGGCCTGAGGAAGGGGTGGTTCCTACGCACGAAGCGCTGGACTTGGT
GTGCGTGCATGAGCAGAAGCTGAACAGCAAGCTGGTCCGGAAGATGGTGG
TGATGCAAAAGGGGGAGGGGACGGGGGATAGAGGGAGGGAGGGGGAGGAG
GGAGGGAGGGAGGGGGAGGGCCCGCGGGTGAAGAGACAGCATATAGTGAG
AGAGTAAGCAGCGCCTGCCCCTGACGGGGAAAGAAGTATGCCTGGATTCT
TGTGCA back to topprotein sequence of rna9397 >rna9397-protein ID=rna9397-protein|Name=rna9397|organism=Nannochloropsis gaditana|type=polypeptide|length=277bp
MGIFNNIINDIAEEPWLIPESPEREDFLFFRGSSHRSISMYRCLIASYWS
IWILISILGSVGVPLPDALFGSMDNDMGEKWLIFLTNWSMVLLGTYLWTA
FAASLYTDHSPRLLQTVWVLRNCTAVAALVVSLLFWCVLFPAIKKTSWTD
VHCHAVNSFLVLLDLTLTHVPYYFKHGWMPFLYLVLYLLFSVVYWAEGGT
DPEGDPYIYEPLDYDHPGAATGLVLAVVFLVVPFVHVSLYAYTRCLSQGL
CQACFGEGGKMGRREGARTDRLPLLPA back to topmRNA from alignment at KK037253.1:171057..173073+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9397 ID=rna9397|Name=rna9397|organism=Nannochloropsis gaditana|type=mRNA|length=2017bp|location=Sequence derived from alignment at KK037253.1:171057..173073+ (Nannochloropsis gaditana)
AGCCAGGTATTCTCCAATGAAATACTCCTCTTTTAGCCCTTTTGACTGCA
CCCAAACGGGAAATGCGTCCACGACCTGCCAGAGTCGTCCATGATAGAGC
CATCCACCGCCTGGCTGGGTTTTGATCTCGCCTATACTTTCTAGTCGTAG
ACAGTTAATGGACCATGGCACCGTCACCGGCGGTATCAGCGACTCGGGTT
CCGTGCTCCTTggtctcgtttcctcccactTTTACCCCACCTGCAcgttc
ctccctgccccctcgccTGTCTATTCATCATAATTTATCCTTTTGTTACA
TTTGGGGACCTGTAGGCTCCACCATAAGGGGCGGGTTGCCCTGTTCGTGC
CCCTCCCGGGACAGCGCTTTCAACGCGATTTCCTTGTCCGAAAGCTGTAG
CAGCTGCTATTCTGGTGCTGCTCAGCAACTATGGGCATTTTCAACAATAT
AATAAATGACATCGCCGAGGAGCCGTGGTTGATACCGGAAAGCCCTGAAC
GGGAGgacttcctctttttccgaGGGAGTAGTCACCGGTCCATTTCCATG
TATCGCTGCCTCATCGCCTCATACTGGAGCATTTGGATCCTGATCAGCAT
ATTGGGTTCAGGTACGTGAGGAGAGGTGTGCGAAGCATTAGAAAGAGGCA
AGAGTGGTACGTTTTTGGGCTTGCCTCGCAGATGGACGAGGCCAtcaact
tcctcctttccgtttcctccctcttccacctcgcATGCGGGGCCTCTCCA
TAGTCGgcgtcccccttcccgacgCGCTCTTCGGGAGCATGGACAACGAC
ATGGGCGAGAAATGGCTGATCTTTCTCACCAATTGGTCCATGGTGCTCTT
GGGCACGTACCTATGGACGGCATTTGCTGCCTCCCTGTACACCGATcact
ccccccgcctccttcaaaCGGTGTGGGTGCTGCGGAATTGCACGGCCGTG
GCCGCTTTGGTCGTCTCCCTGCTCTTTTGgtgcgtcctctttcccgcaaT
CAAGAAGACGAGCTGGACCGACGTGCACTGCCACGCCGTCaactccttcc
tcgtcctcctcgacctgaCCCTCACCCACGTCCCCTACTACTTCAAGCAC
GGGTGGATGCCTTTCCTGTACCTGGTCCTctaccttctcttctccgtGGT
GTactgggcggaggggggcacCGATCCTGAGGGCGACCCGTACATCTACG
AGCCCCTCGACTACGACCATCCAGGCGCCGCCACCGGCTTGGTCCTGGCA
GTGGTCTTCCTGGTCGTGCCTTTCGTGCACGTGTCCTTGTACGCGTACAC
ACGCTGTCTGTCCCAAGGCTTGTGCCAGGCCTGCttcggggaggggggga
agatgggaaggagggagggcgcccgGACGgatcgcctccccctgctgCCG
GCGTGACGCATTGAAGATGATAGAGCTGGGTCAGAAGCGAATCAGAATTG
TGTGGTGTGTAGGGGATCATCGATTGATATCGGGACAGACAGGATAGAAG
CCATGGCCACATGCTTGCGCGCCCGGGTAAAACGGTTCTGGCCCCGAGTA
AGGAGGACTCGACTCAGGTGGTGCCCCTGAGTATGTtcgagaaaggcgga
gggagccttatgggagggaggaaggcaaggagcgTTTAAGTTGGGTCCCA
GTCCAACCGCTGCGCCATGAAAGGGCGAGACCACGGCGTAGAGCCAGGGC
AGGCGGGCCGCGAACCTTTTGGGGACCTGGGCTCATCGTTCCTGCGTGGG
CGCCCGGACTTTTGCCTCTCCCGCCGGCTCAGACGTTGCTTGGTTGGTGG
GACGGGAATCCTGAAGTTCAGGATGGTTGGAGTGGCAGCCTGGGAGGCCA
TtggggggggctgggagcGGCTAGCGAGATGAGTGACGGAAAAAGAACAT
GTTTGGAATGCGAGTCCCTTCCTTGGTAATGTGTGCATGGATCAGTCACA
AATTTCAAAGTAATCACGGCGCATGCGCCGTTGTAGAAACGAACAAATTA
GTGGACGCTTTTTTTGG back to topCoding sequence (CDS) from alignment at KK037253.1:171057..173073+ >rna9397 ID=rna9397|Name=rna9397|organism=Nannochloropsis gaditana|type=CDS|length=1668bp|location=Sequence derived from alignment at KK037253.1:171057..173073+ (Nannochloropsis gaditana)
ATGGGCATTTTCAACAATATAATAAATGACATCGCCGAGGAGCCGTGGTT
GATACCGGAAAGCCCTGAACGGGAGgacttcctctttttccgaGGGAGTA
GTCACCGGTCCATTTCCATGTATCGCTGCCTCATCGCCTCATACTGGAGC
ATTTGGATCCTGATCAGCATATTGGGTTCAGTCGgcgtcccccttcccga
cgCGCTCTTCGGGAGCATGGACAACGACATGGGCGAGAAATGGCTGATCT
TTCTCACCAATTGGTCCATGGTGCTCTTGGGCACGTACCTATGGACGGCA
TTTGCTGCCTCCCTGTACACCGATcactccccccgcctccttcaaaCGGT
GTGGGTGCTGCGGAATTGCACGGCCGTGGCCGCTTTGGTCGTCTCCCTGC
TCTTTTGgtgcgtcctctttcccgcaaTCAAGAAGACGAGCTGGACCGAC
GTGCACTGCCACGCCGTCaactccttcctcgtcctcctcgacctgaCCCT
CACCCACGTCCCCTACTACTTCAAGCACGGGTGGATGCCTTTCCTGTACC
TGGTCCTctaccttctcttctccgtGGTGTactgggcggaggggggcacC
GATCCTGAGGGCGACCCGTACATCTACGAGCCCCTCGACTACGACCATCC
AGGCGCCGCCACCGGCTTGGTCCTGGCAGTGGTCTTCCTGGTCGTGCCTT
TCGTGCACGTGTCCTTGTACGCGTACACACGCTGTCTGTCCCAAGGCTTG
TGCCAGGCCTGCttcggggagggggggaagatgggaaggagggagggcgc
ccgGACGgatcgcctccccctgctgCCGGCGTGAATGGGCATTTTCAACA
ATATAATAAATGACATCGCCGAGGAGCCGTGGTTGATACCGGAAAGCCCT
GAACGGGAGgacttcctctttttccgaGGGAGTAGTCACCGGTCCATTTC
CATGTATCGCTGCCTCATCGCCTCATACTGGAGCATTTGGATCCTGATCA
GCATATTGGGTTCAGTCGgcgtcccccttcccgacgCGCTCTTCGGGAGC
ATGGACAACGACATGGGCGAGAAATGGCTGATCTTTCTCACCAATTGGTC
CATGGTGCTCTTGGGCACGTACCTATGGACGGCATTTGCTGCCTCCCTGT
ACACCGATcactccccccgcctccttcaaaCGGTGTGGGTGCTGCGGAAT
TGCACGGCCGTGGCCGCTTTGGTCGTCTCCCTGCTCTTTTGgtgcgtcct
ctttcccgcaaTCAAGAAGACGAGCTGGACCGACGTGCACTGCCACGCCG
TCaactccttcctcgtcctcctcgacctgaCCCTCACCCACGTCCCCTAC
TACTTCAAGCACGGGTGGATGCCTTTCCTGTACCTGGTCCTctaccttct
cttctccgtGGTGTactgggcggaggggggcacCGATCCTGAGGGCGACC
CGTACATCTACGAGCCCCTCGACTACGACCATCCAGGCGCCGCCACCGGC
TTGGTCCTGGCAGTGGTCTTCCTGGTCGTGCCTTTCGTGCACGTGTCCTT
GTACGCGTACACACGCTGTCTGTCCCAAGGCTTGTGCCAGGCCTGCttcg
gggagggggggaagatgggaaggagggagggcgcccgGACGgatcgcctc
cccctgctgCCGGCGTGA back to top
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