|
|
Properties
| Property Name | Value |
|---|
| Product | exosome complex exonuclease rrp45 |
| Orig transcript id | gnl|cribi|Naga_100075g8.2885.mrna |
| Orig protein id | gnl|cribi|Naga_100075g8.2885 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037253.1 | supercontig | KK037253.1:76749..78610 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9367 ID=rna9367|Name=rna9367|organism=Nannochloropsis gaditana|type=mRNA|length=3211bp
CAATTTTGTCCCGTCGGCTCGCGTTAGACCGTCTCGAAAACTGAGGAATG
GACGAAAGATGGTAGCGCACGCCATTGTCGCAACTGATTTTTCGAGCAAT
CCCGACGCAACCTCCACCACGTGCGTTGGCGGAGTGAGCGAAAGTCACAG
AGATCGACGGGCTGGACGAAGATTGACCCGTGGAAAACCATTACCCATCC
GATCACGGTTCAGAACATTAAAGGGAACGCTTGTACATTGAACAAATTGT
GCCAGCCGTCTGATCGATACATTTTCTCTGACTTGAGGGACATCTGACAT
ACTGATCGAGCCGGCTCACGCACGTCATCCCTTGGTCCCGTGCCCTTCAT
TTCTATCCATCCGCATCATTGACGTCAAAATCGTGTCACTCAAATTTAAA
GAGAACGCACAGGTGAAGGAATCATGGCCCTTGATGCCCTTTTGCGGCGT
CGGCGGCCACTACCTGGAACCAGCAGCTCGAAAAATACTCGGTCGCCGTC
GCCGCCGCATGGAGGGAGCGTGGGATCTGACATCGAAGATGAGAACATCA
AAACCGTTTTAAAAGGGACGCTGAGTTCTGTACACAGCAAATTGGCAGTT
GGGAATGCTAGAAAAGATGGGGGAAGTGACGGGTTTACAAGAGGATGGGA
GGCGACCCCTCAAGCTGTGGAGGGCGAGGAAGCCCTCGTAAGCAGGTTGC
GGGGCCTGGCCTTGGGCACGGATCGATGGACAGCCTTGCTAGTGGCTCTC
TGGGCTCTCCTGTTTCTGGCTCTCGTTGTGAACAAGCAGGAACTGTGGGT
AGTTTTGGCGGGCCTAGTTGCCTACGCCTGCTTCTGCTTCTTGCTGGACG
TGGTGGCCATCCCGCCCATCTGGGACGGGCCCCTCAAGGCTAAGGAGACC
GCCCGCCTCTCCAACAGCCTGGTCTGCATCGCGCACGCCCTCGCCATGGG
TTTCGCAGCCCTCTTTGGAGCCTCGGCGATCCTGAAGCTGACCATGACCT
GCGGCTTCCTCCTCTTCGACCTCTGGGACAAGACCTGGAAGCGCCTCTAC
ACCTCCCCGCCCTACCGCTACACGCGGGGGATCCCCTACGCCCTCCAAGG
CGCCACCACCCTGGTGCTCTCCATCACCGCCATTTGCAAAGGCGTCCCTA
TCAACGCCGATCTGCTCGTCGGCATCCCTGCCGCCCATCTTCTGGTCGAG
TCAGTGCACGACCTGACGCGGATGTTCGCCTCGGAGAGAGCGCCCCCCCT
GGGCCTGGCAAGGGTCACCGAGACAGTCGTGCTTTTCCCCGCCCGGCTTC
TCCCCCACGCACTCCTCCTCGTCTCCCACATCCTTACCATTCATGCGACC
TCCGCCCTCCGCTGCGCCTCAATCCCGCCCTCCACCCTACCCGTCCTCAG
CACCTGGTGGGCGACTCGCGTGATGACCGTCCTGCTCGTCATGCTCAACG
CCTCCAACCTTGCCTCTCTATTCTGGCCCGCCTTCCTTCGGCAGCGTTTC
CTCGCCCAGCACCGTCTTCAGCCTCGACAAGGACACGAGCAGCAGCCAGG
AGCCGCCCTCCCGCCCTCCCCCCCCCCCCGTCCTCGCTCTGGTTTATTCA
CGGTGAGGCCTATGATCTGTCTCCCTTCCTCTGCAAACATCCAGGAGGCT
CCCACGCCCTGCGCTTGGGCCAAGGCCGCGACTGCACGGCTCTCTTCGAA
AGCTACCACCCCTTCACCGAGCGCCACCGGCAGATCCTAGCGAAGCACCG
CGTGGCCGTGGAGGAGACCGTGCTGGACGCGTACTGCCTGGGGGGCGGGG
CGCGGGGACAGGGGCGGGGTGAAGACGTGTTCTACGAGACGTTGAAGAGG
AGGGTGGCGGCGGCGATGGCGGGAGTGGACGTGGTCGCCTCCTGGAAGCG
ACGGGCCTACTACCTGCTGGTGCTCCTGGCCGTCCTCATCTCTTACCGCG
GCTTCCTCCAGGGGCGCTGGTCGGCCCTGCTTGTCTTCTCTCTCTCCTCC
TGGCTCCTTGGCGCGATGGGCCACGACGGCTCGCACTTCGCGTGCTCCCA
TCGGCCCTGGGTGAACCGGCTCTGCGGCCTCGGCATCTCCCTGATCGCCT
CTCCCTTCCTCTGGTACCATCAGCATACCTTCGCGCACCATTCCTTCACC
AACGATTTCGACCACGACCCCGACCTCCACCACTTCGTTCTGACGCGGCC
GCACGCCAGGCAGCCCCGCGGGCCCCATCACGCGCTCCAGCAGTTCCGGC
TCTACGTGCTCGCCCAGTACGCGGTGGTCGTCTTCGGCGAGACCGTCTGG
ATCCCCCTCAAGCTCCTCTGCTTCCGGACCCTGCACGGGGTTATGGCCTT
CCCCAACATTGGGTGGGACGGTCTGGCCCGGGCGCTCGCCCACTTCGTCC
TGTACTACCTGCTCGTCTTCCACGCGCCGGGTCGGTGCTTGGCCGAGGCC
GGCGAGGGCGCTTACAAGGCATGGGCGTTCCCCTTGCTTTACGTGTCGAT
ATGCGGCATGCTCTTCGGGGTTTTCTCGCAAATCAACCACTTAAACGAGA
AGAGCATCGCTGCGGCTCGAGGAGGCTCAGGACACGAAGGGAAGAAGGGG
CGGACCGGGAGGTCCTCCTGGGCCAAGGAGCAGGTGGAGACCTCCTCCAA
TTTCGCGACGCACTCGCCTTGGTGGTTCGTCTTGTCTAATGGGCTGAACT
TCCAAATTGAGCATCATCTTTTTCCAGGTATCAATCATGAGCACCTATGG
AGGGTCCAGCCAGTGGTGAAGGAGGCGTGCAAGGAGTTTGGCGTCAATTA
CAAGAGCTATGAAAGCATCATGGAAATCTTGTGGGATACAGCTCAATACT
ACAAGTCATTGGCGTGAGTGTGCAGGGTAGGGAAGGAGGAAGTTGTTTCA
TTATCTTCGTTACATAGGAGGGAGACTGGAGAAGTGAAGCAAAGCAAGAG
CTGGATCCTCAACGCGCTTAAATGTGTCGCAAGGGACTATCTTTTTGATG
TTTATGGGGCATAATTTTACCACCATCATGTAAGCTGAGGGCAAATTTTG
GATAGCAACAAAAAGGGGAGTGAGCTGAAAGGTTCTTGCAAGCAAGATTA
GCAGCCGGAAAAGGGTTCTTACACGGGAGGAAGTCACCTTCTCATGTTGA
GCTCGTAATATGATGGCGTAGTCTACGGACCCAAAAAAACAGGATGGGAA
AATAAAAACCA back to topprotein sequence of rna9367 >rna9367-protein ID=rna9367-protein|Name=rna9367|organism=Nannochloropsis gaditana|type=polypeptide|length=597bp
MSVIKQGEDMSINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQ
ATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNA
RTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAG
NVVDAACLATVAALMHFRLPEVTVLTGGSDERSNSSANDGESSEPSALPI
HHVPICVTFVLFNTSPIVSVIDPTEREELVMGGRITFSINVHREVCAMQK
IGGLALAPTSLARLAEIAMEKVGDWHSLLQTSLEAADSQAKAERLRCVRG
TASMHVRRGALGDAEGERGEKEVEGGADAPTSHIETAHLDFAELHAPIKV
REGSEKPPIDEEEETRTLSVLEQAALDAEDYRMKQGTKNLTQGTQETQFS
WTGAATRNSDTGAVAGLTDSVVTESTGVNDVRTAACPGSTAETAPTSHRS
SMETKPAGARELGRKTKTLGRRMDVRNGEGRDTEEEDDEEEGDAVMMVSE
FASSTESSLGTPYDKTAIAATGSNARRPSSQGAPQATATTERAENDDEEI
KDLRDAVKKPRVRGQNGSSSGRGAAKRPSGTSSTGTSKNRPKVGTKR back to topmRNA from alignment at KK037253.1:76749..78610- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9367 ID=rna9367|Name=rna9367|organism=Nannochloropsis gaditana|type=mRNA|length=1862bp|location=Sequence derived from alignment at KK037253.1:76749..78610- (Nannochloropsis gaditana)
ATGTCAGTCATAAAGCAAGGTGAAGACATGAGCATCAATGAGCGGGAATT
CATTCTTACGGCGCTAAAGGATGAAAATTGTCGCGCCGATGGCCGGACGC
CTGCGGATACCCGTGAGCTGCGTGTTACTTACGCGCGTGCTGAAGGCCAG
GCAACCGCCGAAATCCAGCTGGGTAAGACGCGCGTGCTTACTGTGGTTAC
TAGCGAGCTTACCCCGCCCTATCCTGATCGGCCTGCAGAAGGATTTTTGA
ACTTGAATGTGGAATACTCTCCCATGGCAACACTTGGAATCGATAATGCA
CGCACTAATCCGACATTAGTGGAAGTGGACCGCGTCATTGAGCGGTGCTT
GCGTCAAAGCCGTGCACTAGACACAGAGGCACTTTGTGTTATCGCTGGCA
GTAAAGTGTGGTCCTTGCGCTGCGACGTGCGAATCCTAGATGACGCAGGG
AATGTTGTGGACGCGGCATGCTTGGCCACAGTCGCAGCGTTGATGCATTT
TCGTCTCCCAGAAGTAACGGTGTTGACTGGAGGTTCAGACGAGAGGAGCA
ACAGCAGCGCAAACGACGGTGAAAGCAGTGTAGGTCGTGTTCGGGGGGGG
GAGGCCTGGGGCACGCGTCTGTGGTTGTTCACCACTCCTTCGAGAAGGAG
CCGTCCGCCTTGCCCATCCACCACGTTCCCATCTGCGTCACTTTCGTGCT
CTTTAACACGTCTCCTATCGTCTCTGTCATTGACCCTACGGAGCGCGAGG
AGCTGGTGATGGGGGGCCGTATAACTTTTTCAATCAACGTGCACAGAGAG
GTGTGTGCCATGCAGAAGATTGGAGGGCTGGCACTGGCCCCGACCAGCCT
TGCGCGGTTGGCAGAGATAGCCATGGAGAAGGTGGGCGACTGGCACTCTC
TCTTACAGACTTCTTTGGAGGCGGCGGACTCGCAAGCCAAGGCGGAAAGA
TTGCGATGCGTGCGTGGGACTGCCTCCATGCACGTTCGGAGAGGAGCGCT
GGGAGACGCAGAAGGAGAAAGGGGAGAAAAAGAAGTGGAAGGAGGGGCGG
ATGCACCTACATCGCATATCGAGACAGCTCATCTTGATTTTGCAGAGTTG
CACGCACCCATCAAAGTCCGAGAGGGATCGGAGAAGCCGCCTATCGATGA
AGAGGAGGAGACACGTACGTTGAGTGTATTGGAGCAGGCAGCTTTGGATG
CAGAGGACTACCGAATGAAACAAGGAACCAAAAACTTGACTCAAGGGACA
CAGGAGACGCAGTTCTCATGGACAGGGGCAGCAACTCGTAACTCAGATAC
AGGAGCTGTCGCAGGGCTTACAGACTCGGTGGTGACTGAAAGCACAGGCG
TGAACGACGTGCGTACAGCAGCTTGTCCGGGATCGACTGCCGAAACTGCA
CCAACTTCACATAGGTCGAGCATGGAAACCAAACCAGCAGGAGCTCGTGA
GCTAGGGAGAAAAACAAAGACATTGGGGAGAAGAATGGACGTAAGGAACG
GAGAGGGTAGGGACACGGAAGAGGAGGACGATGAGGAGGAGGGGGATGCC
GTCATGATGGTTTCAGAATTTGCATCAAGCACCGAAAGCAGTCTCGGAAC
CCCTTATGATAAGACGGCCATTGCAGCGACAGGCTCCAATGCGAGAAGGC
CTTCGTCACAGGGCGCCCCGCAGGCGACAGCTACTACTGAGCGTGCTGAA
AATGATGACGAAGAAATTAAAGATTTGAGAGATGCGGTGAAAAAACCACG
TGTACGAGGACAGAACGGAAGCTCGAGTGGCCGAGGTGCTGCGAAGCGTC
CCAGTGGTACGTCGAGTACGGGCACAAGCAAGAACAGACCGAAAGTAGGC
ACGAAAAGATAA back to topCoding sequence (CDS) from alignment at KK037253.1:76749..78610- >rna9367 ID=rna9367|Name=rna9367|organism=Nannochloropsis gaditana|type=CDS|length=3588bp|location=Sequence derived from alignment at KK037253.1:76749..78610- (Nannochloropsis gaditana)
GAGCCGTCCGCCTTGCCCATCCACCACGTTCCCATCTGCGTCACTTTCGT
GCTCTTTAACACGTCTCCTATCGTCTCTGTCATTGACCCTACGGAGCGCG
AGGAGCTGGTGATGGGGGGCCGTATAACTTTTTCAATCAACGTGCACAGA
GAGGTGTGTGCCATGCAGAAGATTGGAGGGCTGGCACTGGCCCCGACCAG
CCTTGCGCGGTTGGCAGAGATAGCCATGGAGAAGGTGGGCGACTGGCACT
CTCTCTTACAGACTTCTTTGGAGGCGGCGGACTCGCAAGCCAAGGCGGAA
AGATTGCGATGCGTGCGTGGGACTGCCTCCATGCACGTTCGGAGAGGAGC
GCTGGGAGACGCAGAAGGAGAAAGGGGAGAAAAAGAAGTGGAAGGAGGGG
CGGATGCACCTACATCGCATATCGAGACAGCTCATCTTGATTTTGCAGAG
TTGCACGCACCCATCAAAGTCCGAGAGGGATCGGAGAAGCCGCCTATCGA
TGAAGAGGAGGAGACACGTACGTTGAGTGTATTGGAGCAGGCAGCTTTGG
ATGCAGAGGACTACCGAATGAAACAAGGAACCAAAAACTTGACTCAAGGG
ACACAGGAGACGCAGTTCTCATGGACAGGGGCAGCAACTCGTAACTCAGA
TACAGGAGCTGTCGCAGGGCTTACAGACTCGGTGGTGACTGAAAGCACAG
GCGTGAACGACGTGCGTACAGCAGCTTGTCCGGGATCGACTGCCGAAACT
GCACCAACTTCACATAGGTCGAGCATGGAAACCAAACCAGCAGGAGCTCG
TGAGCTAGGGAGAAAAACAAAGACATTGGGGAGAAGAATGGACGTAAGGA
ACGGAGAGGGTAGGGACACGGAAGAGGAGGACGATGAGGAGGAGGGGGAT
GCCGTCATGATGGTTTCAGAATTTGCATCAAGCACCGAAAGCAGTCTCGG
AACCCCTTATGATAAGACGGCCATTGCAGCGACAGGCTCCAATGCGAGAA
GGCCTTCGTCACAGGGCGCCCCGCAGGCGACAGCTACTACTGAGCGTGCT
GAAAATGATGACGAAGAAATTAAAGATTTGAGAGATGCGGTGAAAAAACC
ACGTGTACGAGGACAGAACGGAAGCTCGAGTGGCCGAGGTGCTGCGAAGC
GTCCCAGTGGTACGTCGAGTACGGGCACAAGCAAGAACAGACCGAAAGTA
GGCACGAAAAGATAAATGTCAGTCATAAAGCAAGGTGAAGACATGAGCAT
CAATGAGCGGGAATTCATTCTTACGGCGCTAAAGGATGAAAATTGTCGCG
CCGATGGCCGGACGCCTGCGGATACCCGTGAGCTGCGTGTTACTTACGCG
CGTGCTGAAGGCCAGGCAACCGCCGAAATCCAGCTGGGTAAGACGCGCGT
GCTTACTGTGGTTACTAGCGAGCTTACCCCGCCCTATCCTGATCGGCCTG
CAGAAGGATTTTTGAACTTGAATGTGGAATACTCTCCCATGGCAACACTT
GGAATCGATAATGCACGCACTAATCCGACATTAGTGGAAGTGGACCGCGT
CATTGAGCGGTGCTTGCGTCAAAGCCGTGCACTAGACACAGAGGCACTTT
GTGTTATCGCTGGCAGTAAAGTGTGGTCCTTGCGCTGCGACGTGCGAATC
CTAGATGACGCAGGGAATGTTGTGGACGCGGCATGCTTGGCCACAGTCGC
AGCGTTGATGCATTTTCGTCTCCCAGAAGTAACGGTGTTGACTGGAGGTT
CAGACGAGAGGAGCAACAGCAGCGCAAACGACGGTGAAAGCAGTGAGCCG
TCCGCCTTGCCCATCCACCACGTTCCCATCTGCGTCACTTTCGTGCTCTT
TAACACGTCTCCTATCGTCTCTGTCATTGACCCTACGGAGCGCGAGGAGC
TGGTGATGGGGGGCCGTATAACTTTTTCAATCAACGTGCACAGAGAGGTG
TGTGCCATGCAGAAGATTGGAGGGCTGGCACTGGCCCCGACCAGCCTTGC
GCGGTTGGCAGAGATAGCCATGGAGAAGGTGGGCGACTGGCACTCTCTCT
TACAGACTTCTTTGGAGGCGGCGGACTCGCAAGCCAAGGCGGAAAGATTG
CGATGCGTGCGTGGGACTGCCTCCATGCACGTTCGGAGAGGAGCGCTGGG
AGACGCAGAAGGAGAAAGGGGAGAAAAAGAAGTGGAAGGAGGGGCGGATG
CACCTACATCGCATATCGAGACAGCTCATCTTGATTTTGCAGAGTTGCAC
GCACCCATCAAAGTCCGAGAGGGATCGGAGAAGCCGCCTATCGATGAAGA
GGAGGAGACACGTACGTTGAGTGTATTGGAGCAGGCAGCTTTGGATGCAG
AGGACTACCGAATGAAACAAGGAACCAAAAACTTGACTCAAGGGACACAG
GAGACGCAGTTCTCATGGACAGGGGCAGCAACTCGTAACTCAGATACAGG
AGCTGTCGCAGGGCTTACAGACTCGGTGGTGACTGAAAGCACAGGCGTGA
ACGACGTGCGTACAGCAGCTTGTCCGGGATCGACTGCCGAAACTGCACCA
ACTTCACATAGGTCGAGCATGGAAACCAAACCAGCAGGAGCTCGTGAGCT
AGGGAGAAAAACAAAGACATTGGGGAGAAGAATGGACGTAAGGAACGGAG
AGGGTAGGGACACGGAAGAGGAGGACGATGAGGAGGAGGGGGATGCCGTC
ATGATGGTTTCAGAATTTGCATCAAGCACCGAAAGCAGTCTCGGAACCCC
TTATGATAAGACGGCCATTGCAGCGACAGGCTCCAATGCGAGAAGGCCTT
CGTCACAGGGCGCCCCGCAGGCGACAGCTACTACTGAGCGTGCTGAAAAT
GATGACGAAGAAATTAAAGATTTGAGAGATGCGGTGAAAAAACCACGTGT
ACGAGGACAGAACGGAAGCTCGAGTGGCCGAGGTGCTGCGAAGCGTCCCA
GTGGTACGTCGAGTACGGGCACAAGCAAGAACAGACCGAAAGTAGGCACG
AAAAGATAAATGTCAGTCATAAAGCAAGGTGAAGACATGAGCATCAATGA
GCGGGAATTCATTCTTACGGCGCTAAAGGATGAAAATTGTCGCGCCGATG
GCCGGACGCCTGCGGATACCCGTGAGCTGCGTGTTACTTACGCGCGTGCT
GAAGGCCAGGCAACCGCCGAAATCCAGCTGGGTAAGACGCGCGTGCTTAC
TGTGGTTACTAGCGAGCTTACCCCGCCCTATCCTGATCGGCCTGCAGAAG
GATTTTTGAACTTGAATGTGGAATACTCTCCCATGGCAACACTTGGAATC
GATAATGCACGCACTAATCCGACATTAGTGGAAGTGGACCGCGTCATTGA
GCGGTGCTTGCGTCAAAGCCGTGCACTAGACACAGAGGCACTTTGTGTTA
TCGCTGGCAGTAAAGTGTGGTCCTTGCGCTGCGACGTGCGAATCCTAGAT
GACGCAGGGAATGTTGTGGACGCGGCATGCTTGGCCACAGTCGCAGCGTT
GATGCATTTTCGTCTCCCAGAAGTAACGGTGTTGACTGGAGGTTCAGACG
AGAGGAGCAACAGCAGCGCAAACGACGGTGAAAGCAGT back to top
|