EWM21351.1, cds9337 (CDS) Nannochloropsis gaditana

Overview
NameEWM21351.1
Unique Namecds9337
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:78032..78610 -
Alignment locationKK037253.1:76749..77963 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21351.1
Productexosome complex exonuclease rrp45
Orig transcript idgnl|cribi|Naga_100075g8.2885.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:78032..78610 -
KK037253.1supercontigKK037253.1:76749..77963 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
Vocabulary: INTERPRO
TermDefinition
IPR020568Ribosomal_S5_D2-typ_fold
IPR001247ExoRNase_PH_dom1
IPR015847ExoRNase_PH_dom2
Homology
BLAST of EWM21351.1 vs. NCBI_GenBank
Match: gi|585101536|gb|EWM21351.1| (exosome complex exonuclease rrp45 [Nannochloropsis gaditana])

HSP 1 Score: 1214.13 bits (3140), Expect = 0.000e+0
Identity = 597/597 (100.00%), Postives = 597/597 (100.00%), Query Frame = 0
Query:    1 MSVIKQGEDMSINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLPEVTVLTGGSDERSNSSANDGESSEPSALPIHHVPICVTFVLFNTSPIVSVIDPTEREELVMGGRITFSINVHREVCAMQKIGGLALAPTSLARLAEIAMEKVGDWHSLLQTSLEAADSQAKAERLRCVRGTASMHVRRGALGDAEGERGEKEVEGGADAPTSHIETAHLDFAELHAPIKVREGSEKPPIDEEEETRTLSVLEQAALDAEDYRMKQGTKNLTQGTQETQFSWTGAATRNSDTGAVAGLTDSVVTESTGVNDVRTAACPGSTAETAPTSHRSSMETKPAGARELGRKTKTLGRRMDVRNGEGRDTEEEDDEEEGDAVMMVSEFASSTESSLGTPYDKTAIAATGSNARRPSSQGAPQATATTERAENDDEEIKDLRDAVKKPRVRGQNGSSSGRGAAKRPSGTSSTGTSKNRPKVGTKR 597
            MSVIKQGEDMSINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLPEVTVLTGGSDERSNSSANDGESSEPSALPIHHVPICVTFVLFNTSPIVSVIDPTEREELVMGGRITFSINVHREVCAMQKIGGLALAPTSLARLAEIAMEKVGDWHSLLQTSLEAADSQAKAERLRCVRGTASMHVRRGALGDAEGERGEKEVEGGADAPTSHIETAHLDFAELHAPIKVREGSEKPPIDEEEETRTLSVLEQAALDAEDYRMKQGTKNLTQGTQETQFSWTGAATRNSDTGAVAGLTDSVVTESTGVNDVRTAACPGSTAETAPTSHRSSMETKPAGARELGRKTKTLGRRMDVRNGEGRDTEEEDDEEEGDAVMMVSEFASSTESSLGTPYDKTAIAATGSNARRPSSQGAPQATATTERAENDDEEIKDLRDAVKKPRVRGQNGSSSGRGAAKRPSGTSSTGTSKNRPKVGTKR
Sbjct:    1 MSVIKQGEDMSINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLPEVTVLTGGSDERSNSSANDGESSEPSALPIHHVPICVTFVLFNTSPIVSVIDPTEREELVMGGRITFSINVHREVCAMQKIGGLALAPTSLARLAEIAMEKVGDWHSLLQTSLEAADSQAKAERLRCVRGTASMHVRRGALGDAEGERGEKEVEGGADAPTSHIETAHLDFAELHAPIKVREGSEKPPIDEEEETRTLSVLEQAALDAEDYRMKQGTKNLTQGTQETQFSWTGAATRNSDTGAVAGLTDSVVTESTGVNDVRTAACPGSTAETAPTSHRSSMETKPAGARELGRKTKTLGRRMDVRNGEGRDTEEEDDEEEGDAVMMVSEFASSTESSLGTPYDKTAIAATGSNARRPSSQGAPQATATTERAENDDEEIKDLRDAVKKPRVRGQNGSSSGRGAAKRPSGTSSTGTSKNRPKVGTKR 597          
BLAST of EWM21351.1 vs. NCBI_GenBank
Match: gi|553188798|ref|XP_005854866.1| (exosome complex component RRP45 [Nannochloropsis gaditana CCMP526] >gi|422294192|gb|EKU21492.1| exosome complex component RRP45 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1193.72 bits (3087), Expect = 0.000e+0
Identity = 594/620 (95.81%), Postives = 595/620 (95.97%), Query Frame = 0
Query:    1 MSVIKQGEDMSINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLPEVTVLTGGSDERSNSSANDGESS-----------------------EPSALPIHHVPICVTFVLFNTSPIVSVIDPTEREELVMGGRITFSINVHREVCAMQKIGGLALAPTSLARLAEIAMEKVGDWHSLLQTSLEAADSQAKAERLRCVRGTASMHVRRGALGDAEGERGEKEVEGGADAPTSHIETAHLDFAELHAPIKVREGSEKPPIDEEEETRTLSVLEQAALDAEDYRMKQGTKNLTQGTQETQFSWTGAATRNSDTGAVAGLTDSVVTESTGVNDVRTAACPGSTAETAPTSHRSSMETKPAGARELGRKTKTLGRRMDVRNGEGRDTEEEDDEEEGDAVMMVSEFASSTESSLGTPYDKTAIAATGSNARRPSSQGAPQATATTERAENDDEEIKDLRDAVKKPRVRGQNGSSSGRGAAKRPSGTSSTGTSKNRPKVGTKR 597
            MSVIKQGEDMSINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLPEVTVLTGGSDERSNSSANDGESS                       EPSALPIHHVPICVTFVLFNTSPIVSVIDPTEREELVMGGRITFSINVHREVCAMQKIGGLALAPTSLARLAEIAMEKVGDWHSLLQTSLEAADSQAKAERLRCVRGTASMHVRRGALGDAEGERGEKEVEGGADAPTSHIETAHLDFAELHAPIKVREGSEK PIDEEEETRTLSVLEQAALDAEDYRMKQGTKNLTQGTQETQFSWTGAATRNSDTGAVAGLTDSVVTESTGVNDVRTAACPGSTA+TAPTSHRSSMETKPAGARELGRKTKTLGRRMDVRNGEGRDTEEEDDEEEGDAVMMVSEFASSTESSLGTPYDKTAIAATGSNARRPSSQGAPQATATTERAENDDEEIKDLRDAVKKPRVRGQNGSSSGRGAAKRPSGTSSTGTSKNRPK GTKR
Sbjct:    1 MSVIKQGEDMSINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLPEVTVLTGGSDERSNSSANDGESSVGRVRGGGGLGHASVVVHHSFEKEPSALPIHHVPICVTFVLFNTSPIVSVIDPTEREELVMGGRITFSINVHREVCAMQKIGGLALAPTSLARLAEIAMEKVGDWHSLLQTSLEAADSQAKAERLRCVRGTASMHVRRGALGDAEGERGEKEVEGGADAPTSHIETAHLDFAELHAPIKVREGSEKAPIDEEEETRTLSVLEQAALDAEDYRMKQGTKNLTQGTQETQFSWTGAATRNSDTGAVAGLTDSVVTESTGVNDVRTAACPGSTAQTAPTSHRSSMETKPAGARELGRKTKTLGRRMDVRNGEGRDTEEEDDEEEGDAVMMVSEFASSTESSLGTPYDKTAIAATGSNARRPSSQGAPQATATTERAENDDEEIKDLRDAVKKPRVRGQNGSSSGRGAAKRPSGTSSTGTSKNRPKGGTKR 620          
BLAST of EWM21351.1 vs. NCBI_GenBank
Match: gi|1032648458|gb|OAQ29751.1| (hypothetical protein K457DRAFT_485177 [Mortierella elongata AG-77])

HSP 1 Score: 246.128 bits (627), Expect = 1.533e-73
Identity = 130/277 (46.93%), Postives = 174/277 (62.82%), Query Frame = 0
Query:    9 DMSINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLPEVTVLTGGSDERSNSSANDGESSEPSALPIHHVPICVTFVLFNTSPIVSVIDPTEREELVMGGRITFSINVHREVCAMQKIGGLALAPTSLARLAEIAMEKVGDWHSLLQTSLEA 285
            D S NEREF+L ALKD   R DGR   D R LR+T+    G    E+QLG TRVL  V+ E+  PY D+P EGFL  N E SPMA+   +  R     V V R+IE+ +R+SRALDTE LC++AG KVWS+R D+  LD  GN+VDAAC+A + AL+HFR P+VTV+  G D     + +  E   P  L IHH+PIC TF  FN    + V+DPT  EE V  G +T ++NVH+EVCA+ K GG+ +    + +  ++A+ KV +  + +Q +LEA
Sbjct:    5 DPSTNEREFLLAALKD-GARIDGRKFYDFRTLRLTFGAEYG--AVEVQLGNTRVLAKVSCEVIRPYTDKPTEGFLMFNTELSPMASAAFEVGRQTDEEVLVSRLIEKAMRRSRALDTEGLCIVAGEKVWSIRVDIHFLDHDGNLVDAACIAAITALLHFRRPDVTVV--GED----VTIHTLEQRNPVPLSIHHIPICTTFAFFNNGERM-VVDPTFLEEQVKEGDMTITLNVHKEVCALSKAGGIPMEIDQILQCTKVAVVKVAEITAQIQAALEA 271          
BLAST of EWM21351.1 vs. NCBI_GenBank
Match: gi|672827680|gb|KFH72570.1| (exosome complex component RRP45 [Mortierella verticillata NRRL 6337])

HSP 1 Score: 243.817 bits (621), Expect = 1.120e-72
Identity = 126/284 (44.37%), Postives = 176/284 (61.97%), Query Frame = 0
Query:   11 SINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLPEVTVLTGGSDERSNSSANDGESSEPSALPIHHVPICVTFVLFNTSPIVSVIDPTEREELVMGGRITFSINVHREVCAMQKIGGLALAPTSLARLAEIAMEKVGDWHSLLQTSLEAADSQAKAER 294
            S NEREF+L ALKD   R DGR   D R LR+++    G    E+QLG TRVL  V+ E+  PY D+P EGFL  N E SPMA+   +  R     V V R+IE+ +R+SRALDTE LC++AG KVWS+R D+  LD  GN+VDAAC+A + AL+HFR P+VTV+          + +  E   P  L IHH+PIC TF  F+    + ++DPT  EE +  G +T ++NVH+EVCAM K GG+ +    + + ++IA+ KV +  + +Q++LEA   + +  R
Sbjct:    7 STNEREFVLAALKD-GARIDGRKFYDFRTLRLSFGADYG--AVEVQLGNTRVLAKVSCEVIRPYADKPTEGFLVFNTELSPMASASFEVGRQTDEEVLVSRLIEKAMRRSRALDTEGLCIVAGEKVWSVRVDIHFLDHDGNLVDAACIAAITALLHFRRPDVTVVG------EEVTIHTLEQRNPVPLSIHHIPICTTFAFFDNGERM-IVDPTYLEEQIKEGDMTLTLNVHKEVCAMSKAGGIPMEIDQILQCSKIAVIKVAEITAQIQSALEADAKKRQVSR 280          
BLAST of EWM21351.1 vs. NCBI_GenBank
Match: gi|1183493181|gb|ORZ16853.1| (ribosomal protein S5 domain 2-type protein [Lobosporangium transversale])

HSP 1 Score: 240.736 bits (613), Expect = 1.600e-71
Identity = 126/281 (44.84%), Postives = 179/281 (63.70%), Query Frame = 0
Query:   11 SINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLPEVTVLTGGSDERSNSSANDGESSEPSALPIHHVPICVTFVLFNTSPIVSVIDPTEREELVMGGRITFSINVHREVCAMQKIGGLALAPTSLARLAEIAMEKVGDWHSLLQTSLEAADSQAK 291
            S NEREF+L AL+D   R DGR   D R LR+++    G    E+QLG TRVL  V+ E+  P+PD+P EGFL  N E SPMA+   +  R     V V R+IE+ +++SRALDTE LC++AG KVWS+R D+  LD  GN+VDAAC+A + AL HFR P+VTV+  G D     + +  E   P  L IHH+PICVTF  F+    V ++DPT  EE +  G +T ++NVH+EVCA+ K GG+ +    + + ++IA+ KV +  + ++ +L AAD++ +
Sbjct:    7 STNEREFVLAALRD-GARIDGRNFYDFRTLRLSFGADYG--AVEVQLGNTRVLAKVSCEVIRPFPDKPTEGFLMFNTELSPMASPAFEVGRQTDEEVLVSRLIEKAMKRSRALDTEGLCIVAGEKVWSIRVDIHFLDHDGNLVDAACIAAITALQHFRRPDVTVV--GED----VTIHTLEQRNPVPLSIHHIPICVTFAFFDNGNHV-IVDPTHLEEQIKEGDMTITLNVHKEVCALSKAGGIPMELDQIIQCSKIAVIKVAEITAQIEAAL-AADAKKR 276          
BLAST of EWM21351.1 vs. NCBI_GenBank
Match: gi|831781914|ref|XP_012756515.1| (hypothetical protein SAMD00019534_029280 [Acytostelium subglobosum LB1] >gi|735857147|dbj|GAM19753.1| hypothetical protein SAMD00019534_029280 [Acytostelium subglobosum LB1])

HSP 1 Score: 244.973 bits (624), Expect = 1.187e-70
Identity = 121/304 (39.80%), Postives = 198/304 (65.13%), Query Frame = 0
Query:    8 EDMSINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLPEVTVLTGGSDERSNSSANDGESSEPSALPIHHVPICVTFVLFNTSPIVSVIDPTEREELVMGGRITFSINVHREVCAMQKIGGLALAPTSLARLAEIAMEKVGDWHSLLQTSLEAADSQAKAERLRCVRGTASMHVRRGAL 311
            E +S N+REF+L+++ ++  R DGR   D R +++++ ++ G    E+QLG+TRV T VT E++ P P+RP EGF   + E SPMA++ +D+ R+NP  +E+ R+IER L++SRA+DTE+LC++AGSKVW++R +V +LDD GN++D A ++ + AL+HFR P+VTV+  G++    ++ +  E  EP  L IHH PI +TF  F    +  ++DP  REE VM G+++F +NVH+E+C + K GG++     + + ++IA+ +  +   + Q   EA     +A      R T+  H+RR +L
Sbjct:    3 EILSRNDREFVLSSI-EQRLRLDGRRLNDMRSIKISFGKSSGMV--EVQLGRTRVYTTVTCEVSEPKPERPNEGFFMFSTEISPMASVSVDSTRSNPAEIELGRLIERGLKESRAIDTESLCIVAGSKVWTIRTNVHVLDDCGNLLDCASISVITALLHFRKPDVTVV--GNE----ATIHPIEEREPVPLSIHHTPISITFGFFPKGAM--IVDPESREEQVMDGKLSFLVNVHKEICGVSKGGGMSTTIEQVIKCSKIAIIRTAE---VTQQIREALHQNVQA------RSTSGSHLRRKSL 286          
BLAST of EWM21351.1 vs. NCBI_GenBank
Match: gi|1183367986|gb|ORX94083.1| (hypothetical protein K493DRAFT_221945 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 237.654 bits (605), Expect = 1.841e-70
Identity = 123/279 (44.09%), Postives = 177/279 (63.44%), Query Frame = 0
Query:   11 SINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLPEVTVLTGGSDERSNSSANDGESSEPSALPIHHVPICVTFVLFNTSPIVSVIDPTEREELVMGGRITFSINVHREVCAMQKIGGLALAPTSLARLAEIAMEKVGDWHSLLQTSLEAADSQ 289
            SINER F+L AL+ E  R DGR   D R ++++     GQA  EIQLG+TRVL  V+ E+T PYPD+P EGFL  N E SP+A+   +  R +   V + RVIE+ LR+SRA+DTE LC++AG KVWS+R D+  LD  GN++D AC+A ++AL+HFR P+VTV+          + +  E   P  L IHH+PIC+TF  F+   ++ V+DP   EE +  G +T ++N HRE+C + K GG+ L    + R ++IA  KV +   L+Q +L+++  Q
Sbjct:    8 SINERTFVLQALR-EGHRIDGRGLYDFRNIKISLGPELGQA--EIQLGRTRVLAKVSCEVTRPYPDKPTEGFLIFNTELSPLASPAFEIGRPSEEEVLISRVIEKALRRSRAIDTEGLCIVAGEKVWSIRVDIHFLDHEGNLIDCACIAAISALLHFRRPDVTVVG------EEVTIHPVEERNPVPLSIHHIPICITFSFFDNGELL-VVDPNLLEEQLRTGDMTIAMNAHREMCTLSKAGGIPLDLEQIFRCSKIATVKVQEITELIQNALKSSTVQ 276          
BLAST of EWM21351.1 vs. NCBI_GenBank
Match: gi|1173940301|gb|OQR89760.1| (exosome complex exonuclease RRP45 [Thraustotheca clavata])

HSP 1 Score: 243.047 bits (619), Expect = 2.358e-70
Identity = 137/361 (37.95%), Postives = 204/361 (56.51%), Query Frame = 0
Query:   10 MSINEREFILTALK-----DENC--RADGRTPADTRELRVTYARA--EGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLV-EVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLPEVTVLTGGSDERSNSSANDGESSEPSALPIHHVPICVTFVLFNTSPI-----VSVIDPTEREELVMGGRITFSINVHREVCAMQKIGGLALAPTSLARLAEIAMEKVGDWHSLLQTSLEAADSQAKAERLRCVRGTASMHVRRGALGDAEGERGEKEVEGGADAPTSHIETAHLDFAELHAPIKVREGSE 355
            +S NER+F+L +LK     D+N   RADGR   + R + +   R+  E Q+  E QLG+TRVL VV+ E+ PP+PDRP EGFL  NVE SPM     ++ + +     E+ R++ER +R  +ALDTEAL ++AG  VW+++C + +LD  GN+VDA  +A+VAALMHFR PE              + ND +S+    L +HH+P+ ++F      P      V ++DPT+REE ++ G IT++ N  RE+CA+ KIGG++++   + R A IA  K  D   +L+ + E AD +A  +R   +RG   M     A+  +  ++       G D     I    +DF  LHAPI +R   E
Sbjct:    3 LSSNERDFLLASLKNHPSSDDNAVQRADGRGLVEFRRMNLALRRSVREAQSECEFQLGRTRVLAVVSGEVVPPFPDRPTEGFLQFNVELSPMGAAVFEHKQAHKAWAAELSRIVERSIRDCKALDTEALAIVAGESVWAIKCTIHVLDHGGNLVDAVSIASVAALMHFRRPE--------------TLNDPDSAM-IPLSLHHIPVSISFCFVQLDPNDQDDPVVMLDPTDREEKIVDGNITYTFNSFRELCAVHKIGGVSISTDVVLRCANIAAAKAEDLTDMLKKATEKADQEAIEQRRAMLRGKEFMDKSVAAM--STTQKAIPLDVSGLDKAMEDI----IDFDNLHAPIPLRNDDE 342          
BLAST of EWM21351.1 vs. NCBI_GenBank
Match: gi|573919492|ref|XP_006647360.1| (PREDICTED: exosome complex component RRP45A-like isoform X2 [Oryza brachyantha])

HSP 1 Score: 240.35 bits (612), Expect = 7.796e-70
Identity = 130/288 (45.14%), Postives = 184/288 (63.89%), Query Frame = 0
Query:   11 SINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLPEVTVLTGGSDERSNSSANDGESSEPSALPIHHVPICVTFVLFNTSPIVSVIDPTEREELVMGGRITFSINVHREVCAMQKIGGLALAPTSLARLAEIAMEKVGDWHSLLQ---TSLEAADSQAKAERL 295
            ++NER+FI  AL+  + R DGR P D R L++ + R +G  +AE+QLG+TRV+  VT++L  PY DRP EG L +  E+SPMA    +  R   + +E+ RVI+R LR+SRA+D E+LCV+AG  VWS+R D+ ILD+ GN++D A +A +AAL  FR PE TV   G D+    + +D E  +P  L IHH+PI VTF  F    I+ VIDPT +EE VMGGR+T +IN + +VCA+QK GG  +  + + +   IA  K  D  S ++   TS  +A +  K +RL
Sbjct:    9 TVNERDFIERALQ-SDLRVDGRRPFDFRRLKILFGREDG--SAEVQLGETRVMGYVTAQLVQPYKDRPNEGTLAIFTEFSPMADPAFEPGRPGESAIELGRVIDRGLRESRAVDMESLCVVAGRHVWSVRVDLHILDNGGNLIDTANIAALAALSTFRRPECTV---GGDDGQQVTVHDPEVRDPIPLTIHHLPIAVTFAYFGEGNIM-VIDPTYKEEAVMGGRMTATINSNGDVCAIQKAGGEGVMSSVIMQCLRIASVKAADITSKIKNEVTSYTSAKALQKVKRL 289          
BLAST of EWM21351.1 vs. NCBI_GenBank
Match: gi|1002843846|ref|XP_015689297.1| (PREDICTED: exosome complex component RRP45A-like isoform X1 [Oryza brachyantha] >gi|1002843848|ref|XP_015689298.1| PREDICTED: exosome complex component RRP45A-like isoform X1 [Oryza brachyantha] >gi|1002843850|ref|XP_015689299.1| PREDICTED: exosome complex component RRP45A-like isoform X1 [Oryza brachyantha] >gi|1002843852|ref|XP_015689300.1| PREDICTED: exosome complex component RRP45A-like isoform X1 [Oryza brachyantha])

HSP 1 Score: 241.121 bits (614), Expect = 1.422e-69
Identity = 130/288 (45.14%), Postives = 184/288 (63.89%), Query Frame = 0
Query:   11 SINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLPEVTVLTGGSDERSNSSANDGESSEPSALPIHHVPICVTFVLFNTSPIVSVIDPTEREELVMGGRITFSINVHREVCAMQKIGGLALAPTSLARLAEIAMEKVGDWHSLLQ---TSLEAADSQAKAERL 295
            ++NER+FI  AL+  + R DGR P D R L++ + R +G  +AE+QLG+TRV+  VT++L  PY DRP EG L +  E+SPMA    +  R   + +E+ RVI+R LR+SRA+D E+LCV+AG  VWS+R D+ ILD+ GN++D A +A +AAL  FR PE TV   G D+    + +D E  +P  L IHH+PI VTF  F    I+ VIDPT +EE VMGGR+T +IN + +VCA+QK GG  +  + + +   IA  K  D  S ++   TS  +A +  K +RL
Sbjct:    9 TVNERDFIERALQ-SDLRVDGRRPFDFRRLKILFGREDG--SAEVQLGETRVMGYVTAQLVQPYKDRPNEGTLAIFTEFSPMADPAFEPGRPGESAIELGRVIDRGLRESRAVDMESLCVVAGRHVWSVRVDLHILDNGGNLIDTANIAALAALSTFRRPECTV---GGDDGQQVTVHDPEVRDPIPLTIHHLPIAVTFAYFGEGNIM-VIDPTYKEEAVMGGRMTATINSNGDVCAIQKAGGEGVMSSVIMQCLRIASVKAADITSKIKNEVTSYTSAKALQKVKRL 289          
The following BLAST results are available for this feature:
BLAST of EWM21351.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101536|gb|EWM21351.1|0.000e+0100.00exosome complex exonuclease rrp45 [Nannochloropsis... [more]
gi|553188798|ref|XP_005854866.1|0.000e+095.81exosome complex component RRP45 [Nannochloropsis g... [more]
gi|1032648458|gb|OAQ29751.1|1.533e-7346.93hypothetical protein K457DRAFT_485177 [Mortierella... [more]
gi|672827680|gb|KFH72570.1|1.120e-7244.37exosome complex component RRP45 [Mortierella verti... [more]
gi|1183493181|gb|ORZ16853.1|1.600e-7144.84ribosomal protein S5 domain 2-type protein [Lobosp... [more]
gi|831781914|ref|XP_012756515.1|1.187e-7039.80hypothetical protein SAMD00019534_029280 [Acytoste... [more]
gi|1183367986|gb|ORX94083.1|1.841e-7044.09hypothetical protein K493DRAFT_221945 [Basidiobolu... [more]
gi|1173940301|gb|OQR89760.1|2.358e-7037.95exosome complex exonuclease RRP45 [Thraustotheca c... [more]
gi|573919492|ref|XP_006647360.1|7.796e-7045.14PREDICTED: exosome complex component RRP45A-like i... [more]
gi|1002843846|ref|XP_015689297.1|1.422e-6945.14PREDICTED: exosome complex component RRP45A-like i... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9367rna9367Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications