rna9363, rna9363 (mRNA) Nannochloropsis gaditana

Overview
Namerna9363
Unique Namerna9363
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1287
Alignment locationKK037253.1:67040..68313 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100075g12.2871.mrna
Orig protein idgnl|cribi|Naga_100075g12.2871
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:67040..68313 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100075g12gene9080Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9363rna9363-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21337.1cds9333Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9363 ID=rna9363|Name=rna9363|organism=Nannochloropsis gaditana|type=mRNA|length=1287bp
ATGTATGCCCGATGTGGGACGAAGAAGGGCGTAGTAGCTTTGAATGCAGA
TTACCAGCACTTCGGCGCTGAATGGGTGATGATTCCGTCCAGAGCGCCGT
TCACAGGCGGCAAATGTCCCGATATCCATGCTGACGGTCCTGCAAACTCA
GCGGCCTTCGACGGGGATATAGATACCCTCAAGAGTTTGTTGAAAGCACA
CGGGCGACGCTCCGTTGCCTTTGCCCCACGCGGCCCCTACTCGTGGAATG
CCCTCATGGTTGCTTCCTTTGCCGGACAAGTAGATACAGTACGCTTCCTT
ATTGATGAAGCTGGGTTTTGTGTCGAAGAGCGAGACACTTGCTTGCGGAC
TCCCATCCACCTGGCCACCAAATCAGGATCCATCTGCGTCGTCCGCCTTC
TGCTCGAACGAGGCGCAGATCCTGACCACATGGACGAGGCTCAACGGACA
GCTTTGATTTATGCCGCAGCCGCGTATAACGTACCGTTATTGAGCTGTTT
ACTTGACGGAAACGCAGACCCAGACGTCACAGATCAGTCTCTTCGCTCTT
GTTTGCACTACCTCTCTGAAGGGGGGTACAGTCACTGTGGGGGGGGGAGG
GGAGGGATGTGCGGGCGGGTCGGCCACGAATTAGCGGTGGAAAAAGGCGT
CAAGCGCTTGCTTCTTTACGGTGCACAGGTGGATATAGGGGACCACGCGG
GTCACACGCCCCTGCACCTCGCTGCGGCGTCGTCTAAGGTGAACGTAGTC
TCACTTTTGCTGGGCCTAGGGGGCGCCAACCCGTCTGTGGAGGACAAGGA
GGGCATGACGCCCCTAAGTTTGGCCAAAAACAAGATGGTGGAAGAGATGC
TAGAAGCTGCACCTTACCAAGCATATCAGCTGGAGAAAATGCGGTGTCTT
GTTGGATTGATGGGGACGGAAAATAAGGAGGACGGGCACTATGGCAAGCT
AGGCCGGGTCTTGACGGATGATGCTCATGCAAGAGAAAGCGAAGACCGTG
CGACAACCGCGCCGTCCCTTATCTATACCAACGGCAAGATCGCGCGGCCT
GCAAAAGCGGTGGAGCGGGTGCGGCACCTGATCAGCCTGCGCCGACAGAC
ACTAGAGCCCCCGAGGCCAATGCCCCGCGTGCATTTCCACGGTCGAGGCG
AAGACGGACCACGGCGCCCAGTGCACCCGATTCCTGACTTACCTGTCTGT
GTTTTGCAGCTAGCAGTGCAGCATATGAATGGGGACTTGTTCAAGGAGCT
GCTGGGATTCCTCTGGTCATGGAGGCTGCCGGGGTGA
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protein sequence of rna9363

>rna9363-protein ID=rna9363-protein|Name=rna9363|organism=Nannochloropsis gaditana|type=polypeptide|length=347bp
MGSISLGEVRIAGSLLATLIQVVGQRAGRRAEGLLLGDALVHTVAVTDDT
QEARERTDLQLDVTGYVSTNQKDAFYEPLTGTMNATKIAEATSEVNRRHR
MVGWYVARNTASTKPSLRDLAILRHLGDYLRSTSREDDAEALRGESRTPS
EAKKSTSGTTLDRRGKDPALAFPAVLIVFSLDLRSSSEAQGISYACHYLS
PAAPFSSSESASLAYQTHLLKVRNVSHDSTAEYQAYTGGTYPSLLSPHSS
LPSRTSQPSARMPSPVIPSMRPGLADFARAIPPPHVTEYELYLDQILEHL
HGLVDEIRAEELELSALRKKQGRLKHLLRAEKEKGRGISGEREEKLV
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mRNA from alignment at KK037253.1:67040..68313-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9363 ID=rna9363|Name=rna9363|organism=Nannochloropsis gaditana|type=mRNA|length=1274bp|location=Sequence derived from alignment at KK037253.1:67040..68313- (Nannochloropsis gaditana)
ATGGGCTCAATTTCCCTGGGCGAAGTGCGCATAGCTGGCTCTCTTCTGGC
TACGCTCATACAGGTAGTGGGGCAGCGGGCAGGTCGGCGTGCAGAGGGCT
TGTTGCTCGGGGATGCCCTTGTCCACACCGTGGCCGTCACGGATGACACA
CAAGAAGCGAGGGAGCGCACAGACCTGCAATTAGACGTGACAGGGTATGT
GTCCACAAATCAAAAGGACGCGTTCTATGAACCACTGACTGGAACCATGA
ACGCGACAAAAATTGCCGAGGCCACATCAGAAGTTAATAGGCGACATGTA
AGTCTGTTGGAGAGTTAATTGAGAAAGAAAGAGGTTAAAAGGGGTTCGAA
GGGGACAAGGAGATACAGTAGAAGGCCAAATGTGTAACAAAAGATGTAAT
ATGACAGATAAAGGTGGTAAAAAGGGTGATAGGAGAGGATGAGGACAGGA
TGAGAAAGAGTCACGAATCTGGAGCATCTTCGTCTTGAGCCCCTTATTCC
CTTTTACGCATCTGCGCCATCTCGCAGAGGATGGTTGGCTGGTATGTGGC
TCGAAATACGGCAAGCACCAAGCCAAGCTTGCGAGACCTGGCCATACTGA
GGCATTTGGGTGACTACTTGAGGTCCACATCGCGAGAAGATGATGCTGAA
GCTCTCCGGGGAGAGAGCAGGACGCCAAGCGAGGCAAAGAAATCCACCAG
CGGGACGACATTAGATAGGCGAGGAAAGGATCCAGCTTTAGCCTTTCCGG
CAGTGCTAATCGTGTTCTCCCTGGACCTGCGATCCTCCTCGGAGGCTCAG
GGCATTTCATATGCCTGCCACTACCTTTCTCCTGCTGCTCCCTTTTCTTC
CTCCGAGAGTGCGTCCCTCGCCTACCAAACGCATCTTCTCAAGGTCCGAA
ATGTCTCACACGACTCTACCGCCGAGTACCAGGCCTACACAGGGGGCACG
TACCCGTCATTGCTCTCCCCGCACTCGTCACTCCCCTCGAGAACCTCCCA
ACCCTCTGCAAGGATGCCCTCCCCAGTTATCCCCTCTATGCGTCCCGGCT
TGGCAGACTTCGCACGCGCCATTCCTCCTCCTCATGTGACGGAATACGAA
CTGTATCTAGATCAGATTTTGGAGCATCTGCACGGCTTAGTGGATGAGAT
ACGCGCGGAAGAACTGGAATTGAGTGCGTTGAGAAAAAAGCAAGGACGAT
TAAAACATTTATTGCGGGCGGAAAAAGAGAAGGGTAGGGGTATCTCTGGA
GAAAGAGAGGAAAAATTGGTTTAA
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Coding sequence (CDS) from alignment at KK037253.1:67040..68313-

>rna9363 ID=rna9363|Name=rna9363|organism=Nannochloropsis gaditana|type=CDS|length=2088bp|location=Sequence derived from alignment at KK037253.1:67040..68313- (Nannochloropsis gaditana)
AGGATGGTTGGCTGGTATGTGGCTCGAAATACGGCAAGCACCAAGCCAAG
CTTGCGAGACCTGGCCATACTGAGGCATTTGGGTGACTACTTGAGGTCCA
CATCGCGAGAAGATGATGCTGAAGCTCTCCGGGGAGAGAGCAGGACGCCA
AGCGAGGCAAAGAAATCCACCAGCGGGACGACATTAGATAGGCGAGGAAA
GGATCCAGCTTTAGCCTTTCCGGCAGTGCTAATCGTGTTCTCCCTGGACC
TGCGATCCTCCTCGGAGGCTCAGGGCATTTCATATGCCTGCCACTACCTT
TCTCCTGCTGCTCCCTTTTCTTCCTCCGAGAGTGCGTCCCTCGCCTACCA
AACGCATCTTCTCAAGGTCCGAAATGTCTCACACGACTCTACCGCCGAGT
ACCAGGCCTACACAGGGGGCACGTACCCGTCATTGCTCTCCCCGCACTCG
TCACTCCCCTCGAGAACCTCCCAACCCTCTGCAAGGATGCCCTCCCCAGT
TATCCCCTCTATGCGTCCCGGCTTGGCAGACTTCGCACGCGCCATTCCTC
CTCCTCATGTGACGGAATACGAACTGTATCTAGATCAGATTTTGGAGCAT
CTGCACGGCTTAGTGGATGAGATACGCGCGGAAGAACTGGAATTGAGTGC
GTTGAGAAAAAAGCAAGGACGATTAAAACATTTATTGCGGGCGGAAAAAG
AGAAGGGTAGGGGTATCTCTGGAGAAAGAGAGGAAAAATTGGTTTAAATG
GGCTCAATTTCCCTGGGCGAAGTGCGCATAGCTGGCTCTCTTCTGGCTAC
GCTCATACAGGTAGTGGGGCAGCGGGCAGGTCGGCGTGCAGAGGGCTTGT
TGCTCGGGGATGCCCTTGTCCACACCGTGGCCGTCACGGATGACACACAA
GAAGCGAGGGAGCGCACAGACCTGCAATTAGACGTGACAGGGTATGTGTC
CACAAATCAAAAGGACGCGTTCTATGAACCACTGACTGGAACCATGAACG
CGACAAAAATTGCCGAGGCCACATCAGAAGTTAATAGGCGACATAGGATG
GTTGGCTGGTATGTGGCTCGAAATACGGCAAGCACCAAGCCAAGCTTGCG
AGACCTGGCCATACTGAGGCATTTGGGTGACTACTTGAGGTCCACATCGC
GAGAAGATGATGCTGAAGCTCTCCGGGGAGAGAGCAGGACGCCAAGCGAG
GCAAAGAAATCCACCAGCGGGACGACATTAGATAGGCGAGGAAAGGATCC
AGCTTTAGCCTTTCCGGCAGTGCTAATCGTGTTCTCCCTGGACCTGCGAT
CCTCCTCGGAGGCTCAGGGCATTTCATATGCCTGCCACTACCTTTCTCCT
GCTGCTCCCTTTTCTTCCTCCGAGAGTGCGTCCCTCGCCTACCAAACGCA
TCTTCTCAAGGTCCGAAATGTCTCACACGACTCTACCGCCGAGTACCAGG
CCTACACAGGGGGCACGTACCCGTCATTGCTCTCCCCGCACTCGTCACTC
CCCTCGAGAACCTCCCAACCCTCTGCAAGGATGCCCTCCCCAGTTATCCC
CTCTATGCGTCCCGGCTTGGCAGACTTCGCACGCGCCATTCCTCCTCCTC
ATGTGACGGAATACGAACTGTATCTAGATCAGATTTTGGAGCATCTGCAC
GGCTTAGTGGATGAGATACGCGCGGAAGAACTGGAATTGAGTGCGTTGAG
AAAAAAGCAAGGACGATTAAAACATTTATTGCGGGCGGAAAAAGAGAAGG
GTAGGGGTATCTCTGGAGAAAGAGAGGAAAAATTGGTTTAAATGGGCTCA
ATTTCCCTGGGCGAAGTGCGCATAGCTGGCTCTCTTCTGGCTACGCTCAT
ACAGGTAGTGGGGCAGCGGGCAGGTCGGCGTGCAGAGGGCTTGTTGCTCG
GGGATGCCCTTGTCCACACCGTGGCCGTCACGGATGACACACAAGAAGCG
AGGGAGCGCACAGACCTGCAATTAGACGTGACAGGGTATGTGTCCACAAA
TCAAAAGGACGCGTTCTATGAACCACTGACTGGAACCATGAACGCGACAA
AAATTGCCGAGGCCACATCAGAAGTTAATAGGCGACAT
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Synonyms
Publications