EWM21337.1, cds9333 (CDS) Nannochloropsis gaditana

Overview
NameEWM21337.1
Unique Namecds9333
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:68017..68313 -
Alignment locationKK037253.1:67040..67786 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21337.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100075g12.2871.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:68017..68313 -
KK037253.1supercontigKK037253.1:67040..67786 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21337.1 vs. NCBI_GenBank
Match: gi|585101522|gb|EWM21337.1| (hypothetical protein Naga_100075g12 [Nannochloropsis gaditana])

HSP 1 Score: 700.279 bits (1806), Expect = 0.000e+0
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0 
Query:    1 MGSISLGEVRIAGSLLATLIQVVGQRAGRRAEGLLLGDALVHTVAVTDDTQEARERTDLQLDVTGYVSTNQKDAFYEPLTGTMNATKIAEATSEVNRRHRMVGWYVARNTASTKPSLRDLAILRHLGDYLRSTSREDDAEALRGESRTPSEAKKSTSGTTLDRRGKDPALAFPAVLIVFSLDLRSSSEAQGISYACHYLSPAAPFSSSESASLAYQTHLLKVRNVSHDSTAEYQAYTGGTYPSLLSPHSSLPSRTSQPSARMPSPVIPSMRPGLADFARAIPPPHVTEYELYLDQILEHLHGLVDEIRAEELELSALRKKQGRLKHLLRAEKEKGRGISGEREEKLV 347
            MGSISLGEVRIAGSLLATLIQVVGQRAGRRAEGLLLGDALVHTVAVTDDTQEARERTDLQLDVTGYVSTNQKDAFYEPLTGTMNATKIAEATSEVNRRHRMVGWYVARNTASTKPSLRDLAILRHLGDYLRSTSREDDAEALRGESRTPSEAKKSTSGTTLDRRGKDPALAFPAVLIVFSLDLRSSSEAQGISYACHYLSPAAPFSSSESASLAYQTHLLKVRNVSHDSTAEYQAYTGGTYPSLLSPHSSLPSRTSQPSARMPSPVIPSMRPGLADFARAIPPPHVTEYELYLDQILEHLHGLVDEIRAEELELSALRKKQGRLKHLLRAEKEKGRGISGEREEKLV
Sbjct:    1 MGSISLGEVRIAGSLLATLIQVVGQRAGRRAEGLLLGDALVHTVAVTDDTQEARERTDLQLDVTGYVSTNQKDAFYEPLTGTMNATKIAEATSEVNRRHRMVGWYVARNTASTKPSLRDLAILRHLGDYLRSTSREDDAEALRGESRTPSEAKKSTSGTTLDRRGKDPALAFPAVLIVFSLDLRSSSEAQGISYACHYLSPAAPFSSSESASLAYQTHLLKVRNVSHDSTAEYQAYTGGTYPSLLSPHSSLPSRTSQPSARMPSPVIPSMRPGLADFARAIPPPHVTEYELYLDQILEHLHGLVDEIRAEELELSALRKKQGRLKHLLRAEKEKGRGISGEREEKLV 347
[Close]
BLAST of EWM21337.1 vs. NCBI_GenBank
Match: gi|553181682|ref|XP_005853607.1| (hypothetical protein NGA_0670320 [Nannochloropsis gaditana CCMP526] >gi|422295456|gb|EKU22755.1| hypothetical protein NGA_0670320 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 634.41 bits (1635), Expect = 0.000e+0
Identity = 313/317 (98.74%), Postives = 315/317 (99.37%), Query Frame = 0 
Query:    1 MGSISLGEVRIAGSLLATLIQVVGQRAGRRAEGLLLGDALVHTVAVTDDTQEARERTDLQLDVTGYVSTNQKDAFYEPLTGTMNATKIAEATSEVNRRHRMVGWYVARNTASTKPSLRDLAILRHLGDYLRSTSREDDAEALRGESRTPSEAKKSTSGTTLDRRGKDPALAFPAVLIVFSLDLRSSSEAQGISYACHYLSPAAPFSSSESASLAYQTHLLKVRNVSHDSTAEYQAYTGGTYPSLLSPHSSLPSRTSQPSARMPSPVIPSMRPGLADFARAIPPPHVTEYELYLDQILEHLHGLVDEIRAEELELSAL 317
            MGSISLGEVRIAGSLLATLIQVVGQRAGRRAEGLLLGDALVHTVAVTDDTQEAR+RTDLQLDVTGYVSTNQKDAFYEPLTGTMNATKIAEATSEVNRRHRMVGWYVARNTASTKPSLRDLAILRHLGDYLRSTSREDDAEALRGESRTPSEAKKS+SGTTLDRRGKDPALAFPAVLIVFSLDLRSSSEAQGISYACHYLSPAAPFSSSESASLAYQTHLLKVRNVSHDSTAEYQAYTGGTYPSLLSPHSSLPSRTSQPSARMPSPVIPSMRPGLADFARAIPPPHVTEYELYLDQILEHLHGLVDEIRAEELEL A 
Sbjct:    1 MGSISLGEVRIAGSLLATLIQVVGQRAGRRAEGLLLGDALVHTVAVTDDTQEARDRTDLQLDVTGYVSTNQKDAFYEPLTGTMNATKIAEATSEVNRRHRMVGWYVARNTASTKPSLRDLAILRHLGDYLRSTSREDDAEALRGESRTPSEAKKSSSGTTLDRRGKDPALAFPAVLIVFSLDLRSSSEAQGISYACHYLSPAAPFSSSESASLAYQTHLLKVRNVSHDSTAEYQAYTGGTYPSLLSPHSSLPSRTSQPSARMPSPVIPSMRPGLADFARAIPPPHVTEYELYLDQILEHLHGLVDEIRAEELELRAF 317
The following BLAST results are available for this feature:
BLAST of EWM21337.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585101522|gb|EWM21337.1|0.000e+0100.00hypothetical protein Naga_100075g12 [Nannochlorops... [more]
gi|553181682|ref|XP_005853607.1|0.000e+098.74hypothetical protein NGA_0670320 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9363rna9363Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications