rna9354, rna9354 (mRNA) Nannochloropsis gaditana

Overview
Namerna9354
Unique Namerna9354
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2632
Alignment locationKK037253.1:46730..47776 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100075g22.2867.mrna
Orig protein idgnl|cribi|Naga_100075g22.2867
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:46730..47776 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100075g22gene9071Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21333.1cds9324Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9354rna9354-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9354 ID=rna9354|Name=rna9354|organism=Nannochloropsis gaditana|type=mRNA|length=2632bp
AGTTGGGGTTCTTCAACCTTTTACGGGGCCAGGAGGTTGGACATGATTAT
TCAAGGATAACAAAGAATGCTGCAAGGGAAATTTAACAGAGAAACGAAAA
GTTATACAAAGGTTTGGGCTTCACAATGCCGTAGGTTATCTTCTTGAAGC
AAACTGACACGCTCGTCTAACGTCAGCTCCCAAACAAAAACAGAGGGAAG
CTGCCCGCATTGGCAGGGATGCTCAATCAAAGAATGATGGAAGGTCATCC
ACGCCCCCAGGGCACAAATTGAAAGTATAGAGACAAGCCTTAAAAACTGG
CACACACTTTGTCAGGCAGGTGGTCTTACTCGCGGTGATTCTTCTATACA
AAAGTGTACAGCCTCCTATCGAAAGCTACATATTCTGTTGTTCCTCCCGT
GACGACTTATCGTGCGCTTAGGAACCTATTTGGAAAACCATTCAAGTCGC
CTTCAGGAAAAAAATGCGTACTTCTTGCACTTCAGTCGGGGTGAACATGT
GTGTAAGCCTCGTAACTGCATTCCACGCCCGACCTGGCGCTTCACACCGC
TTCCAACGAGTGAGTCTCAGCAACCTTCACATTCCTCTTCCTCTGGCAAG
CGCTGCACTCATAGAAAGGGCGACCCTACCTTCTTATCTCCACTCCTCTC
CTGTTGAAGAGATTCATGGTATTTTCGACGACCACTTGAAAGTTTACGTG
AAAAGAGACGACAAGTTGGACCTCCTGGGTGCCGGAATTCACGGCAATAA
GGCTCGGAAGCTCTGGGGCCTGGCATCTTCATACCCTTTGTCTTCTTCTC
GCCCTTTCCCCGCTGTCTGTCTCAGCTGGGGGGGGATCCAAAGCAATGCC
CTGGCCGCGCTCGCGGGCTTCGTGTGCGGCGTACAGCAGAAGCGACTCAT
CTACTACACAAAGACGATCCCTGCGTGGTTGAAAGACCATCCAGTGGGGA
ACTACAGGCGTGCTCTGGAGCTGGGTGTGGATTTTCGCGAGCTCCGTGCT
TCAGAGTTCCAGGACATTTTTGGGGCAACAGATGAGACCGAAGGAGGGGA
CGGCGAGGCCAGGTGCATACGTCTGAAGAAGAGGCTTGTAGAGAGAGAAG
GGGACCTGCTTGCGCGTGAAGCCGACGATCTGCTCCTCGTGCCGCAAGGG
GCTGCCTTCCCAGGAGCCGAGGAAGGGATCGATCGCCTGGGCCGGGAAGT
GGAGGACTGGTGGGCGACGGAGAGCGGGTCCGGCGAGAGGGCCGAGGTAA
AGCCGCTGGCTGTGGTCCTCCCGGCTGGGACGGGCACGACGGCTTTCTAC
CTGGCGAGGACCCTGGCCAGCTCCTCTCTGGGGAGAACTCCGGTAGTGTA
TGCGGTGCCCTGTGTCGGGGACGGCACCTACCTACGGGCGCAAATGGCTC
GTCTCACCCGCAGCGAGGCGCTTTCCGAAACACCCGCTCGGCCCGAGGGG
CGGGGGGTGCTAGGGGGGAGGAAAGGAGGGAAGCCAGGCGCGGACCACGG
ATCGGAAGGGTGGAGGGAGAAGGCGCCACAGGGGGCCTTTCCCGAGGTCT
TGGAGGGCTCCGCGCCTCACGTGTTCGGCCAACCCGGGCAGGCGCTGATC
GACATGTGGCATGAGATGGGAGAAAAGCATGGGCTGGAGCTGGACCTGCT
CTACGGACCTCGCGCCTGGTGCGTGATCAGGCAGCACTGGTCGGTCCTAA
GGGCCAAGCACGACAAGCTCCTGTACATACACACCGGGGGCATGGAGGGC
CTGCCCAGCCAGCTGGCAAGGTATCGATACCGAAAGATGCTACCAGACCC
CGGCGAGTAATTTACGTGAAGAAATACGGTGCGAACAAGTGAGACTTGAG
ATACCAGCTTCTTCTTCCAGAATTGTTTCTAGCCTCTGCTCTTCCGTCGT
TGCCGTGCACGCTTCTACAGCCTAAATTAAGACCGGCCGGAGTTGAGCCT
CCCCCGCGTCCTTCACATCCCCTACATTCACCACGCCGCCGATCCCCAGC
GGGTCTACTTTTCGCATCTCCACCTCCTTGAATGTAAGCTGGCCTTCAGA
AAGCGACACCGCTCCGTCTTGTCGCACGTGGTTAAAACGAAAGTTCAAAC
GATTGCCGGGAATACCGGTCCCGCCAAAGACAGGTCGGAGCTCTTTCCTC
CTCTCTCCCTCCTCATCCACTTCTGTCAAGCAGTCATCGAGCACCGGCAG
AGAAAAATAGAGATACGGGAATAGAGGTTCGTCGAAAAGCCCCCAGATCC
ACAGACCCCATTGCCTGTCATTCTTGTCTTCGCTCAGTGTCCATGCCGGA
GCAGGTCCCAAGGCGAAGCCTTTCTCATCCGTATCGATAAGTGCCAGCGG
GTCTCGCTCTACAAAGATTCGGCCTTGAGGAGGCTCGTAACCAGGTTCTG
TCACGAAGCGTATTCGAAAATCTGCCTGAATATCAGAGTAGCCCTCTTTC
TTAATAACGACGCTCAGGTCCCAAGGGACGTTCGAGGAAAGACTGGCTTT
TTTACTTGCGCCAGTGGAGGAGGGGGAGGTTGTAGTAGGCGGCGGAGGAG
ATGATGTGGAAGCCAGCGGGGCGAGGACTGAGGATTTTGAGAGCCTCACA
ACAAAAGCATGCGCGAAAGTCAAGGCCTGGAA
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protein sequence of rna9354

>rna9354-protein ID=rna9354-protein|Name=rna9354|organism=Nannochloropsis gaditana|type=polypeptide|length=249bp
MNLCFSVHVLLALFQALTFAHAFVVRLSKSSVLAPLASTSSPPPPTTTSP
SSTGASKKASLSSNVPWDLSVVIKKEGYSDIQADFRIRFVTEPGYEPPQG
RIFVERDPLALIDTDEKGFALGPAPAWTLSEDKNDRQWGLWIWGLFDEPL
FPYLYFSLPVLDDCLTEVDEEGERRKELRPVFGGTGIPGNRLNFRFNHVR
QDGAVSLSEGQLTFKEVEMRKVDPLGIGGVVNVGDVKDAGEAQLRPVLI
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mRNA from alignment at KK037253.1:46730..47776-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9354 ID=rna9354|Name=rna9354|organism=Nannochloropsis gaditana|type=mRNA|length=1047bp|location=Sequence derived from alignment at KK037253.1:46730..47776- (Nannochloropsis gaditana)
GTTCGTACTCGAGGGACTGCCGGGGACGCTGCAACATTGAGAGACAGGAT
GTTCCCAAATTACTGACCAAGTTACCTATTTTGGACACATCCACTTTTCT
CGAACAGTAGTGCCCCCGCATCGGCGCTCTTAGGTACCGGCAGGCGCCTT
CTTCAGGGCGTTGACGCAGATTTCCTCTCTAATGAACCTCTGCTTTTCGG
TCCACGTACTTCTGGCACTCTTCCAGGCCTTGACTTTCGCGCATGCTTTT
GTTGTGAGGCTCTCAAAATCCTCAGTCCTCGCCCCGCTGGCTTCCACATC
ATCTCCTCCGCCGCCTACTACAACCTCCCCCTCCTCCACTGGCGCAAGTA
AAAAAGCCAGTCTTTCCTCGAACGTCCCTTGGGACCTGAGCGTCGTTATT
AAGAAAGAGGGCTACTCTGATATTCAGGCAGATTTTCGAATACGCTTCGT
GACAGAACCTGGTTACGAGCCTCCTCAAGGCCGAATCTTTGTAGAGCGAG
ACCCGCTGGCACTTATCGATACGGATGAGAAAGGCTTCGCCTTGGGACCT
GCTCCGGCATGGACACTGAGCGAAGACAAGAATGACAGGCAATGGGGTCT
GTGGATCTGGGGGCTTTTCGACGAACCTCTATTCCCGTATCTCTATTTTT
CTCTGCCGGTGCTCGATGACTGCTTGACAGAAGTGGATGAGGAGGGAGAG
AGGAGGAAAGAGCTCCGACCTGTCTTTGGCGGGACCGGTATTCCCGGCAA
TCGTTTGAACTTTCGTTTTAACCACGTGCGACAAGACGGAGCGGTGTCGC
TTTCTGAAGGCCAGCTTACATTCAAGGAGGTGGAGATGCGAAAAGTAGAC
CCGCTGGGGATCGGCGGCGTGGTGAATGTAGGGGATGTGAAGGACGCGGG
GGAGGCTCAACTCCGGCCGGTCTTAATTTAGGCTGTAGAAGCGTGCACGG
CAACGACGGAAGAGCAGAGGCTAGAAACAATTCTGGAAGAAGAAGCTGGT
ATCTCAAGTCTCACTTGTTCGCACCGTATTTCTTCACGTAAATTACT
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Coding sequence (CDS) from alignment at KK037253.1:46730..47776-

>rna9354 ID=rna9354|Name=rna9354|organism=Nannochloropsis gaditana|type=CDS|length=750bp|location=Sequence derived from alignment at KK037253.1:46730..47776- (Nannochloropsis gaditana)
ATGAACCTCTGCTTTTCGGTCCACGTACTTCTGGCACTCTTCCAGGCCTT
GACTTTCGCGCATGCTTTTGTTGTGAGGCTCTCAAAATCCTCAGTCCTCG
CCCCGCTGGCTTCCACATCATCTCCTCCGCCGCCTACTACAACCTCCCCC
TCCTCCACTGGCGCAAGTAAAAAAGCCAGTCTTTCCTCGAACGTCCCTTG
GGACCTGAGCGTCGTTATTAAGAAAGAGGGCTACTCTGATATTCAGGCAG
ATTTTCGAATACGCTTCGTGACAGAACCTGGTTACGAGCCTCCTCAAGGC
CGAATCTTTGTAGAGCGAGACCCGCTGGCACTTATCGATACGGATGAGAA
AGGCTTCGCCTTGGGACCTGCTCCGGCATGGACACTGAGCGAAGACAAGA
ATGACAGGCAATGGGGTCTGTGGATCTGGGGGCTTTTCGACGAACCTCTA
TTCCCGTATCTCTATTTTTCTCTGCCGGTGCTCGATGACTGCTTGACAGA
AGTGGATGAGGAGGGAGAGAGGAGGAAAGAGCTCCGACCTGTCTTTGGCG
GGACCGGTATTCCCGGCAATCGTTTGAACTTTCGTTTTAACCACGTGCGA
CAAGACGGAGCGGTGTCGCTTTCTGAAGGCCAGCTTACATTCAAGGAGGT
GGAGATGCGAAAAGTAGACCCGCTGGGGATCGGCGGCGTGGTGAATGTAG
GGGATGTGAAGGACGCGGGGGAGGCTCAACTCCGGCCGGTCTTAATTTAG
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Synonyms
Publications