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Properties
| Property Name | Value |
|---|
| Product | proteasome subunit beta type-6 |
| Orig transcript id | gnl|cribi|Naga_100075g24.2886.mrna |
| Orig protein id | gnl|cribi|Naga_100075g24.2886 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037253.1 | supercontig | KK037253.1:42176..43255 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9352 ID=rna9352|Name=rna9352|organism=Nannochloropsis gaditana|type=mRNA|length=657bp
ATGCTTGGCTTTGGAGCAATCTTAGGTTTTTTATCAGCATCGGCCTTGGC
TCCTGCATCATTGCCACCGAATAAACTAAAGCCTGTATTCGGCGCTTTGG
GCTTCCCAGCTGCAACCTTCTTGGAAGTCGGTACCGGAGTTTTTTGCGCC
TTGAGCGGGGCGGGCTTAGCACCTGGTTTCGCAGGGAGCTTGGAGACCTT
GGTGGGAGGAGGAATGGGCTTCTTCAGGGCAGCGGATGCCGCCGGCTTTT
TGTCGCCTCCCCCAAAGAGGCTGAAGGGTTTGCCGTTACTTGTTGAACCG
CTGCTCTTGGCAGCATTTGAGGCGGATTTAGGCGCGCCTTGTGGCTTCTT
CAAGGGAGAAGGGGTAGAAGGTGGCTTGCTCATCATGACAGGCGGAGGAG
GGGGGTTGGCCTTCTTGAGGACAGGAGGTGGCACAGGTTTGCCAGCGCCC
ACAGACGGCGGGGACTTGGCTGTTGCTAGAGTGGGGGGGCTCTTCGCCTT
AAGGGGGGACGAGGAAACGGGAGCTTTCTTGGGAGCTGGCTCGGGAGCCT
TGGACTTGGCTTCTGCGACAACAGCCGGTTTCGGAGTCTCGTCCGCGCTG
GGCCCCTCCCCAGCCCGCGTCCCCGTGAAAGGGCTGGTCAGAGCGTCCAA
CAGGTAG back to topprotein sequence of rna9352 >rna9352-protein ID=rna9352-protein|Name=rna9352|organism=Nannochloropsis gaditana|type=polypeptide|length=332bp
MSQRHTSCAPTPSRIKRHGLCMGRILCMLLFFFPVITVAVSRPGQEYPRG
SSFNLGLIDDNANDGANAGLGAGGVDFLGGLSTGTTMVAAKYKDGVVVGA
DSRSVKNGRYVADRFTDKVQQVSEYVVLVCSGRTAVVQRLNQEIAARLRF
YQIQHQRLPTSRHAAAVLRILMRMGLEPVEEKQQRNDKTQVTMDTDALAA
GWSPREGPRIHQVLTGGTVLEARDYAVAGHGADYIVGFMDAHYPQVEEAG
KALAHAGMSKEDCEEIVRRAMALAVGRDTQSGEGVTIAVVNPQGTTKRVL
STAELQRSLKKALSVVQATENRKEKEREGATP back to topmRNA from alignment at KK037253.1:42176..43255- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9352 ID=rna9352|Name=rna9352|organism=Nannochloropsis gaditana|type=mRNA|length=1080bp|location=Sequence derived from alignment at KK037253.1:42176..43255- (Nannochloropsis gaditana)
ATGAGTCAGAGACACACGTCCTGCGCACCGACGCCCTCGAGAATCAAAAG
GCACGGGTTATGCATGGGCCGAATCCTTTGCATGCTTCTATTCTTTTTTC
CAGTCATAACTGTTGCCGTATCCCGTCCGGGTCAGGAATACCCGAGAGGG
AGTTCCTTCAATTTGGGCCTCATTGACGACAACGCAAACGATGGTGCGAA
CGCCGGCCTCGGGGCGGGAGGCGTCGACTTCCTTGGCGGGCTGTCGACAG
GGACAACGATGGTGGCAGCCAAGTACAAAGACGGAGTAGTGGTTGGGGCA
GACTCCCGCTCAGTGAAGAGTAAGTAACAAACCATTTGCTGTCGCTTTTC
ACCCCGCTATTGACCAATCAAATGGTAACCGTATTGCTTCCCTCCAAAAG
ACGGTCGCTACGTGGCAGACCGCTTCACAGACAAGGTGCAGCAAGTCAGC
GAATACGTTGTACTGGTCTGTTCAGGACGCACGGCCGTTGTGCAACGTCT
CAACCAGGAAATCGCGGCGCGACTGCGGTTCTATCAAATTCAACATCAAC
GGTTGCCCACGAGCCGGCACGCTGCTGCTGTTCTCCGCATCCTCATGCGG
ATGGGACTAGAACCTGTGGAGGAAAAGCAGCAGCGAAACGACAAAACTCA
AGTAACAATGGACACTGATGCACTGGCGGCGGGATGGAGTCCAAGGGAGG
GTCCGCGCATTCATCAGGTGCTGACAGGGGGCACAGTGCTTGAGGCACGA
GATTACGCCGTGGCCGGGCACGGGGCTGACTACATCGTAGGCTTTATGGA
CGCGCACTACCCCCAAGTAGAGGAAGCAGGCAAAGCATTGGCGCATGCAG
GGATGTCCAAGGAGGACTGCGAAGAAATTGTGAGACGCGCCATGGCCCTG
GCCGTGGGACGAGACACGCAGTCGGGCGAGGGCGTGACGATAGCGGTCGT
GAACCCGCAGGGGACTACGAAGAGGGTGCTTTCCACGGCCGAGCTCCAAA
GGAGCCTCAAAAAAGCCTTGAGCGTTGTTCAAGCGACGGAAAATAGGAAG
GAGAAGGAACGCGAGGGTGCTACACCATAG back to topCoding sequence (CDS) from alignment at KK037253.1:42176..43255- >rna9352 ID=rna9352|Name=rna9352|organism=Nannochloropsis gaditana|type=CDS|length=1998bp|location=Sequence derived from alignment at KK037253.1:42176..43255- (Nannochloropsis gaditana)
ACGGTCGCTACGTGGCAGACCGCTTCACAGACAAGGTGCAGCAAGTCAGC
GAATACGTTGTACTGGTCTGTTCAGGACGCACGGCCGTTGTGCAACGTCT
CAACCAGGAAATCGCGGCGCGACTGCGGTTCTATCAAATTCAACATCAAC
GGTTGCCCACGAGCCGGCACGCTGCTGCTGTTCTCCGCATCCTCATGCGG
ATGGGACTAGAACCTGTGGAGGAAAAGCAGCAGCGAAACGACAAAACTCA
AGTAACAATGGACACTGATGCACTGGCGGCGGGATGGAGTCCAAGGGAGG
GTCCGCGCATTCATCAGGTGCTGACAGGGGGCACAGTGCTTGAGGCACGA
GATTACGCCGTGGCCGGGCACGGGGCTGACTACATCGTAGGCTTTATGGA
CGCGCACTACCCCCAAGTAGAGGAAGCAGGCAAAGCATTGGCGCATGCAG
GGATGTCCAAGGAGGACTGCGAAGAAATTGTGAGACGCGCCATGGCCCTG
GCCGTGGGACGAGACACGCAGTCGGGCGAGGGCGTGACGATAGCGGTCGT
GAACCCGCAGGGGACTACGAAGAGGGTGCTTTCCACGGCCGAGCTCCAAA
GGAGCCTCAAAAAAGCCTTGAGCGTTGTTCAAGCGACGGAAAATAGGAAG
GAGAAGGAACGCGAGGGTGCTACACCATAGATGAGTCAGAGACACACGTC
CTGCGCACCGACGCCCTCGAGAATCAAAAGGCACGGGTTATGCATGGGCC
GAATCCTTTGCATGCTTCTATTCTTTTTTCCAGTCATAACTGTTGCCGTA
TCCCGTCCGGGTCAGGAATACCCGAGAGGGAGTTCCTTCAATTTGGGCCT
CATTGACGACAACGCAAACGATGGTGCGAACGCCGGCCTCGGGGCGGGAG
GCGTCGACTTCCTTGGCGGGCTGTCGACAGGGACAACGATGGTGGCAGCC
AAGTACAAAGACGGAGTAGTGGTTGGGGCAGACTCCCGCTCAGTGAAGAA
CGGTCGCTACGTGGCAGACCGCTTCACAGACAAGGTGCAGCAAGTCAGCG
AATACGTTGTACTGGTCTGTTCAGGACGCACGGCCGTTGTGCAACGTCTC
AACCAGGAAATCGCGGCGCGACTGCGGTTCTATCAAATTCAACATCAACG
GTTGCCCACGAGCCGGCACGCTGCTGCTGTTCTCCGCATCCTCATGCGGA
TGGGACTAGAACCTGTGGAGGAAAAGCAGCAGCGAAACGACAAAACTCAA
GTAACAATGGACACTGATGCACTGGCGGCGGGATGGAGTCCAAGGGAGGG
TCCGCGCATTCATCAGGTGCTGACAGGGGGCACAGTGCTTGAGGCACGAG
ATTACGCCGTGGCCGGGCACGGGGCTGACTACATCGTAGGCTTTATGGAC
GCGCACTACCCCCAAGTAGAGGAAGCAGGCAAAGCATTGGCGCATGCAGG
GATGTCCAAGGAGGACTGCGAAGAAATTGTGAGACGCGCCATGGCCCTGG
CCGTGGGACGAGACACGCAGTCGGGCGAGGGCGTGACGATAGCGGTCGTG
AACCCGCAGGGGACTACGAAGAGGGTGCTTTCCACGGCCGAGCTCCAAAG
GAGCCTCAAAAAAGCCTTGAGCGTTGTTCAAGCGACGGAAAATAGGAAGG
AGAAGGAACGCGAGGGTGCTACACCATAGATGAGTCAGAGACACACGTCC
TGCGCACCGACGCCCTCGAGAATCAAAAGGCACGGGTTATGCATGGGCCG
AATCCTTTGCATGCTTCTATTCTTTTTTCCAGTCATAACTGTTGCCGTAT
CCCGTCCGGGTCAGGAATACCCGAGAGGGAGTTCCTTCAATTTGGGCCTC
ATTGACGACAACGCAAACGATGGTGCGAACGCCGGCCTCGGGGCGGGAGG
CGTCGACTTCCTTGGCGGGCTGTCGACAGGGACAACGATGGTGGCAGCCA
AGTACAAAGACGGAGTAGTGGTTGGGGCAGACTCCCGCTCAGTGAAGA back to top
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