|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100075g29.2870.mrna |
| Orig protein id | gnl|cribi|Naga_100075g29.2870 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037253.1 | supercontig | KK037253.1:27404..30534 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9348 ID=rna9348|Name=rna9348|organism=Nannochloropsis gaditana|type=mRNA|length=931bp
TCCTACTACGGCAGCACCCACCGCGGCCCCCACTGGAGCACCCACGCCTG
CCCCTACGCCTGCTCCTACTACGGCAGCACCCACCGCGGCCCCCACTGGA
GCACCCACGCCTGCCCCTACGCCTGTTCCTACTACGGCAGCACCCACCGC
GGCCCCCACTGGAGCACCTACGCCTGCTCCTACGCCCGCTTCTTCCGTCG
ATCCCCAGGCAGTCACGGATGCGCCTACCCCGGCCCCAACGGATGCACCT
ACCGAGTCTGTGTACACACCGCCGCCCTACACCAAGCCCGACGAGGAGAT
GGTCGGAAAGAGCGGCCGACGCTTGCGACGAGGCAACTAAACAAGCGATT
TTGAAATGTGTACGGCGTGGTCATTTGATATCATGGGCACAAGAAGTCTG
CTTTTTTGATGCAATCGATTTAGGAGAGTGAAGTGCTGCATAGAGTAAGC
AGAGTATGCGTAAGTCCAAAATAGCGAGCGTGATATGCGGGTTGAACGAG
AGAGACCAAAGCAATGAGAAAGGAGGGCAGAATCATGTGAGATTCGTGCC
TTTAGAATTTATCGAGATCGAATACACCGCTACTAGGAATGCAGTTGATT
GCCCAAGTGAAAGACACTGAAATGACCCGAAAGATGCTTCTGTCGGGATA
AAAGCGTCCGGAAGCGTGCTCGGAGTCTGCAATCTCTTAGTTTCCTTATT
TATCTTCCACAGTAAGGTACGAGTGAGGAGAGCAACTTCCTGGTGACGTC
GGCTGCGTGTTTGGGAAGACCTACTGGTTGTATTTTAAGCTACCATAAGA
GGGTAGCTGTGAAAGGAACTCAGTGGGGAAGTCAAACTTCAGGTCACTAA
AAGCAAAAAAATGAATTAAGGCTTCAAAAGAGAAAAGCTACTGCGATTCT
AATCTGCATTGCGCGGACCTTGTAAGCAACC back to topprotein sequence of rna9348 >rna9348-protein ID=rna9348-protein|Name=rna9348|organism=Nannochloropsis gaditana|type=polypeptide|length=256bp
MEPEGRKALNLRVCTADDHKTLFSVPPVVQGGWVLDICLDYFSTQNPFLV
ALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTREL
INLFEVSGVSMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLARG
DSALFEILRSLGGHCASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPP
SVVFLARSVRDGYTPPSIGDALQEKVLDALRNIQLLGPLRVLAHYLALEE
EESGGE back to topmRNA from alignment at KK037253.1:27404..30534- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9348 ID=rna9348|Name=rna9348|organism=Nannochloropsis gaditana|type=mRNA|length=3131bp|location=Sequence derived from alignment at KK037253.1:27404..30534- (Nannochloropsis gaditana)
TGCTAATTATCTTGAGCTTTGGTGAAGGCTTGTTCTAATTAATCGAGCGT
GACAAGCAATCTCATCAATTTATATCTTTAATTGTGCCACTAAGGAGGAA
ACCAACAGACATTGATGAATTCTCATCGATAGTTGAATAAATGGGCGATT
GGACGGGTAGATCTCACAAAGCACCTGATATGACAAGTGCAAGACGAAGT
ACCTTGCCCACACCCCTGGATGTGCACATTGTCGAGGACCATGGACAGGT
ACTTGAATACCTGTACGACTCAATAGGGGTAAGTGTACAACCTTTAATTG
TCCGCAATAATACATGCTGAGTACTACCATCCGCTGTCACCGGGCAGGCC
AAGCGAACGCCCTTCTCGAACCTCGACTGGGTCCATTTCGACAGCCATCC
CGACCTCTCCCTACCTCCATCTCTCTCTGCATCCACCGTGCGGGAACCCT
TCAAACTTTTCGATGCTTTGGAGTGAGTCCTGGGGTATAGTTGCGCGACT
TGTCGGGACTCACTCACGTGCTCATGGTCTTCTCGCATATTTCCGCGCTC
GCATTGACAGGCAGTCTGAAGGAGGCAATTCCGAGTTTATATTACCTGCA
GTGTTTGCAGGTCATTTGACAAGAGTCTGTTGGGTACGGCCGCCTTGGGC
TCGGCAGCTTCCTGATGGCTTCCACGGCTATCATGTGGGTGTGGAGGAAA
GCAGCGGCTGCTTGCGTGTGAGTCTGCCCGTCATTTATTACTACGATGAA
CGGCTACATTGTTCTTCGCAAGACATGGAGCCCGAAGGACGGAAAGCTCT
CAACCTTCGCGTGTGCACAGCGGACGATCACAAGACTCTCTTCAGCGTGC
CACCAGTAGTGCAGGGGGGGTGGGTGCTCGATATCTGCTTGGACTACTTC
AGTACCCAGAATCCATTCCTTGTGGCTCTGGAGGAGGACCAGGGGCCAGC
GGCTCGCGAGGCAGTGCTTGCTTATTTCCAAGCACCGCATTTCCGCCGAA
AAGAAGCACTTGAGGCCGTCCCCGAGGAGGTAAAAGCAGAGGTATGTCAA
GGCGCCTGACCATCCCAAACGCGTCCGATCTGAGGCATCATCGGGCTCTC
TTTTGGTATGCGTTTTCTATCCTTCACACGACGTCACTAAGCTCTCGAAC
ATTTTCGGAAAAACATTTTTTACACCGTAGATGGCAGCATTTTTACGGCT
CACGCGCGAGTTGATCAACTTGTTTGAAGTCTCGGGTGTTTCCATGACCA
ATGAAAGGGTAACAGCCATCAGAGAAGAACTTGACCCTTTGATGGGTTCA
AATCTCCCGCGCGAAACTTCGCAATCGGTCACCAATGCATTCGTTGAAGT
GCTTGCTCGAGGCGACAGCGCCCTTTTCGAAATTCTTCGGAGTCTGGGGG
GACATTGTGCTTCTTTACCGTCACATTGCAGCTCATGGGAGGAAATAGAC
GCAATGATCGTGCAAACGGCCAAAGCAGTTGAAGGTCTATGCCAAGGTAG
GGGAGAAGAGCACGGTATGTCTCGCTCGCTCCGTTTAATCCGCAAGCCTT
CTTTTTCGCAAACATATGTACAGCATACGGATGTCCACCATCAGTCGTGT
TTCTGGCTCGTTCCGTGCGTGACGGGTACACGCCTCCGAGCATTGGAGAT
GCTCTCCAGGTGCGCCTTGTAAATCGTAAATTCAATCTAGTTCATGAAAA
TAAACTTAAACTGACATTACTCATTTGCACACAGGAAAAAGTATTGGATG
CGCTTAGAAATATTCAGCTCTTGGGCCCTTTAAGGGTGCTGGCACATTAT
CTTGCATTGGAGGAGGAAGAATCGGGTGGCGAGTGAAGAGACTGTCATGT
TGGAGCGGGGTAATTTCCTTCACACAACATAGCTCAAAGCTGTGTTCAAA
TGATCTCCACCATAAAGTTGCGTGTCCATCAAAGCATAGATTATCATCAA
TCTTCCTCTTTGTCGCGGAAGACTCTTCAGACGGCGGGATGGCCCAGTGG
CCGATTCCGCATACCCGGATGTGGACACTAGCCGTTGAGCTTCATGGGCC
TGGTCTATGGGCCCCTGCTGCGAGAGAAACTATTCGTGGCTTGCGACTGG
CGCTTTCTGCGCGTGTGATGGACTGGAAGGCCGTGCCCCTCGATTTTTGC
GCTTCCCCATGCGACCTCGTGTCCTCTTCCTGTTGGCAACTACCCATTGC
CGATGCCAAATGCCAATTCAAGCCTCAAGTTTTGAAGTGTTATCACCCTC
TGAAGCAAAGTCTCGAAGAACAATTCAAAATTACCCACCCTTCGCTCTCT
CACTTGTGACCCATTTAAAATATGCCATTGCCCTTCCATTGCATGTTTTA
CAGTCCAGACCCTCAAATCATCACTTTGATTGTTCTTGTTTGAGCCCGAG
GGATTTCTATGCGCCATATCGCAGGAAGTGTTCAAATAGCGAATCAGACC
CCTGGGCCCTCCAAATACCTCGAGACATAAATCACTGACTTGTAGCCCTG
TATACGCACAACACAGAAATCGTCACCCAATCTCGACTCATTTCAGGAAT
ATGCGTTCCCTCAAGCTCTCTTTCATCTGCTCTGTCGCCCTCTTTGCTGG
CGCCGCCGTTGCCGCCGAAGGGGACAGCGTCTACACTCCCCCTCCTTACC
AAAACGAAGGGACAAACTCCAGCAGCGTCGCGGTCGCTGATGTGACCATC
GCCCCGACTTCTGCGCCCACAGGCACCCCGACCGCTGCGCCCACGGCAGC
TCCCACCCCTAAGGCTGTCTACACCTCTGCCCCTACCCCGGCCCCGACCG
AGGCAGTCTACGACGTGAAGCCCCAGGGTGAGGTTGAGCCCAACGAAACC
ACGGAGGCGCCAACATCTGCCCCTACATCCTCTCCGAGCCCGGCTCCCAC
TGCCGCCCCTACTCCGGCTCCCACTGCCTTCCCGACTGCGGCACCCACTG
CTCCTCCGACGCCGGCCCCTACGGCAACCCCGACTGCCGCCCCCACGCCC
GCTCCCACCAAGCCCGTCTATACGCCCCCTCCCACCGCCACGCCCACGGC
TGCTCCCACCAAGCCCGTCTATACGCCCCCTCCCACCGCCGCCCCCACGC
CCGCTCCCACTAAGCCGGTCTACACGCCCCC back to topCoding sequence (CDS) from alignment at KK037253.1:27404..30534- >rna9348 ID=rna9348|Name=rna9348|organism=Nannochloropsis gaditana|type=CDS|length=3084bp|location=Sequence derived from alignment at KK037253.1:27404..30534- (Nannochloropsis gaditana)
GAAAAAGTATTGGATGCGCTTAGAAATATTCAGCTCTTGGGCCCTTTAAG
GGTGCTGGCACATTATCTTGCATTGGAGGAGGAAGAATCGGGTGGCGAGT
GACATACGGATGTCCACCATCAGTCGTGTTTCTGGCTCGTTCCGTGCGTG
ACGGGTACACGCCTCCGAGCATTGGAGATGCTCTCCAGATGGCAGCATTT
TTACGGCTCACGCGCGAGTTGATCAACTTGTTTGAAGTCTCGGGTGTTTC
CATGACCAATGAAAGGGTAACAGCCATCAGAGAAGAACTTGACCCTTTGA
TGGGTTCAAATCTCCCGCGCGAAACTTCGCAATCGGTCACCAATGCATTC
GTTGAAGTGCTTGCTCGAGGCGACAGCGCCCTTTTCGAAATTCTTCGGAG
TCTGGGGGGACATTGTGCTTCTTTACCGTCACATTGCAGCTCATGGGAGG
AAATAGACGCAATGATCGTGCAAACGGCCAAAGCAGTTGAAGGTCTATGC
CAAGATGGAGCCCGAAGGACGGAAAGCTCTCAACCTTCGCGTGTGCACAG
CGGACGATCACAAGACTCTCTTCAGCGTGCCACCAGTAGTGCAGGGGGGG
TGGGTGCTCGATATCTGCTTGGACTACTTCAGTACCCAGAATCCATTCCT
TGTGGCTCTGGAGGAGGACCAGGGGCCAGCGGCTCGCGAGGCAGTGCTTG
CTTATTTCCAAGCACCGCATTTCCGCCGAAAAGAAGCACTTGAGGCCGTC
CCCGAGGAGGTAAAAGCAGAGGAAAAAGTATTGGATGCGCTTAGAAATAT
TCAGCTCTTGGGCCCTTTAAGGGTGCTGGCACATTATCTTGCATTGGAGG
AGGAAGAATCGGGTGGCGAGTGACATACGGATGTCCACCATCAGTCGTGT
TTCTGGCTCGTTCCGTGCGTGACGGGTACACGCCTCCGAGCATTGGAGAT
GCTCTCCAGATGGCAGCATTTTTACGGCTCACGCGCGAGTTGATCAACTT
GTTTGAAGTCTCGGGTGTTTCCATGACCAATGAAAGGGTAACAGCCATCA
GAGAAGAACTTGACCCTTTGATGGGTTCAAATCTCCCGCGCGAAACTTCG
CAATCGGTCACCAATGCATTCGTTGAAGTGCTTGCTCGAGGCGACAGCGC
CCTTTTCGAAATTCTTCGGAGTCTGGGGGGACATTGTGCTTCTTTACCGT
CACATTGCAGCTCATGGGAGGAAATAGACGCAATGATCGTGCAAACGGCC
AAAGCAGTTGAAGGTCTATGCCAAGATGGAGCCCGAAGGACGGAAAGCTC
TCAACCTTCGCGTGTGCACAGCGGACGATCACAAGACTCTCTTCAGCGTG
CCACCAGTAGTGCAGGGGGGGTGGGTGCTCGATATCTGCTTGGACTACTT
CAGTACCCAGAATCCATTCCTTGTGGCTCTGGAGGAGGACCAGGGGCCAG
CGGCTCGCGAGGCAGTGCTTGCTTATTTCCAAGCACCGCATTTCCGCCGA
AAAGAAGCACTTGAGGCCGTCCCCGAGGAGGTAAAAGCAGAGGAAAAAGT
ATTGGATGCGCTTAGAAATATTCAGCTCTTGGGCCCTTTAAGGGTGCTGG
CACATTATCTTGCATTGGAGGAGGAAGAATCGGGTGGCGAGTGACATACG
GATGTCCACCATCAGTCGTGTTTCTGGCTCGTTCCGTGCGTGACGGGTAC
ACGCCTCCGAGCATTGGAGATGCTCTCCAGATGGCAGCATTTTTACGGCT
CACGCGCGAGTTGATCAACTTGTTTGAAGTCTCGGGTGTTTCCATGACCA
ATGAAAGGGTAACAGCCATCAGAGAAGAACTTGACCCTTTGATGGGTTCA
AATCTCCCGCGCGAAACTTCGCAATCGGTCACCAATGCATTCGTTGAAGT
GCTTGCTCGAGGCGACAGCGCCCTTTTCGAAATTCTTCGGAGTCTGGGGG
GACATTGTGCTTCTTTACCGTCACATTGCAGCTCATGGGAGGAAATAGAC
GCAATGATCGTGCAAACGGCCAAAGCAGTTGAAGGTCTATGCCAAGATGG
AGCCCGAAGGACGGAAAGCTCTCAACCTTCGCGTGTGCACAGCGGACGAT
CACAAGACTCTCTTCAGCGTGCCACCAGTAGTGCAGGGGGGGTGGGTGCT
CGATATCTGCTTGGACTACTTCAGTACCCAGAATCCATTCCTTGTGGCTC
TGGAGGAGGACCAGGGGCCAGCGGCTCGCGAGGCAGTGCTTGCTTATTTC
CAAGCACCGCATTTCCGCCGAAAAGAAGCACTTGAGGCCGTCCCCGAGGA
GGTAAAAGCAGAGGAAAAAGTATTGGATGCGCTTAGAAATATTCAGCTCT
TGGGCCCTTTAAGGGTGCTGGCACATTATCTTGCATTGGAGGAGGAAGAA
TCGGGTGGCGAGTGACATACGGATGTCCACCATCAGTCGTGTTTCTGGCT
CGTTCCGTGCGTGACGGGTACACGCCTCCGAGCATTGGAGATGCTCTCCA
GATGGCAGCATTTTTACGGCTCACGCGCGAGTTGATCAACTTGTTTGAAG
TCTCGGGTGTTTCCATGACCAATGAAAGGGTAACAGCCATCAGAGAAGAA
CTTGACCCTTTGATGGGTTCAAATCTCCCGCGCGAAACTTCGCAATCGGT
CACCAATGCATTCGTTGAAGTGCTTGCTCGAGGCGACAGCGCCCTTTTCG
AAATTCTTCGGAGTCTGGGGGGACATTGTGCTTCTTTACCGTCACATTGC
AGCTCATGGGAGGAAATAGACGCAATGATCGTGCAAACGGCCAAAGCAGT
TGAAGGTCTATGCCAAGATGGAGCCCGAAGGACGGAAAGCTCTCAACCTT
CGCGTGTGCACAGCGGACGATCACAAGACTCTCTTCAGCGTGCCACCAGT
AGTGCAGGGGGGGTGGGTGCTCGATATCTGCTTGGACTACTTCAGTACCC
AGAATCCATTCCTTGTGGCTCTGGAGGAGGACCAGGGGCCAGCGGCTCGC
GAGGCAGTGCTTGCTTATTTCCAAGCACCGCATTTCCGCCGAAAAGAAGC
ACTTGAGGCCGTCCCCGAGGAGGTAAAAGCAGAG back to top
|