EWM21336.1, cds9318 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|585101521|gb|EWM21336.1| (hypothetical protein Naga_100075g29 [Nannochloropsis gaditana]) HSP 1 Score: 523.087 bits (1346), Expect = 0.000e+0 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
Query: 1 MEPEGRKALNLRVCTADDHKTLFSVPPVVQGGWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGVSMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLARGDSALFEILRSLGGHCASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNIQLLGPLRVLAHYLALEEEESGGE 256
MEPEGRKALNLRVCTADDHKTLFSVPPVVQGGWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGVSMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLARGDSALFEILRSLGGHCASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNIQLLGPLRVLAHYLALEEEESGGE
Sbjct: 1 MEPEGRKALNLRVCTADDHKTLFSVPPVVQGGWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGVSMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLARGDSALFEILRSLGGHCASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNIQLLGPLRVLAHYLALEEEESGGE 256
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|919035021|ref|XP_013401052.1| (PREDICTED: UPF0489 protein C5orf22 homolog [Lingula anatina]) HSP 1 Score: 72.0182 bits (175), Expect = 9.002e-11 Identity = 68/237 (28.69%), Postives = 101/237 (42.62%), Query Frame = 0
Query: 13 VCTADDHKT--LFSVPPVVQGGWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGVSMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLARGDSALFEILRSLGGHC--ASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNIQLLGPLRVLAHY 245
+C D T + S ++LDI LD++STQNPF + E Q L YF+ P R EA + FL+ N+F+ T + +E D + + V +++ S FE L +G C LP H SS EEI A++ T +VE L P ++ ++RS D Y PPS D +Q +VLD L+ ++ G L + Y
Sbjct: 283 ICNNDSTVTRIVNSAEKTSSKAYILDIDLDFYSTQNPFKITYTEKQFEILNR--LYYFKRPSLGR----EAEGTREREAQLNFLQ------NVFKDLSTGKTFHEIKTSTQEKD--------LQKIKLVEELVLDLQKNTASIDFEWLHEVGCTCDDTELPHHISSPEEIHALVRATKSSVELL----PVNPIMITISRSSEDDYCPPSQVDFIQTQVLDMLK--EVYGQLDIRYDY 493
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|405975615|gb|EKC40169.1| (UPF0489 protein C5orf22-like protein [Crassostrea gigas]) HSP 1 Score: 70.8626 bits (172), Expect = 1.836e-10 Identity = 55/209 (26.32%), Postives = 102/209 (48.80%), Query Frame = 0
Query: 29 VQGGWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGVSMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLARGDSALFEILRSLGGHC--ASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNIQL 235
+ G +LDI LD++ST+NPFL Q +E L FQAP E +EA + + E+ L +E + + S +++ + I+ ++ L ++ Q+ GD+ F++L G C LP H S+ E+++ ++ T + + L + P+++ +ARS +D Y PP +++Q VL+ L+++ L
Sbjct: 238 LHGTVILDIDLDFYSTKNPFLEVFTPSQYKILQE--LYRFQAPTSNSDEDIEACVVKREKELN---HLKQEFLKFSQCSEPLLSHPKANQIKALVEDL-------QSCQT---------EGGDAVNFDLLHEAGCTCDDTELPHHVSNQEQMNLLVDATQEFLSHLKR-----PTIITMARSSQDDYCPPDQVESIQNSVLEILQDLYL 420
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|675200389|ref|XP_008909079.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|675200391|ref|XP_008909080.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|675200393|ref|XP_008909081.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >gi|566019166|gb|ETI42077.1| hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|566019167|gb|ETI42078.1| hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|566019168|gb|ETI42079.1| hypothetical protein, variant 3 [Phytophthora parasitica P1569] >gi|567956498|gb|ETK82119.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567956499|gb|ETK82120.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567956500|gb|ETK82121.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|567985181|gb|ETL35528.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567985182|gb|ETL35529.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567985183|gb|ETL35530.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568044828|gb|ETM42008.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568044829|gb|ETM42009.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568044830|gb|ETM42010.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568090728|gb|ETN05557.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|568090729|gb|ETN05558.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|568090730|gb|ETN05559.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >gi|570322753|gb|ETO70701.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570322754|gb|ETO70702.1| hypothetical protein, variant 2 [Phytophthora parasitica P1976] >gi|570322755|gb|ETO70703.1| hypothetical protein, variant 3 [Phytophthora parasitica P1976] >gi|570946565|gb|ETP11822.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >gi|570946566|gb|ETP11823.1| hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >gi|570946567|gb|ETP11824.1| hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >gi|570978886|gb|ETP39977.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297] >gi|570978887|gb|ETP39978.1| hypothetical protein, variant 2 [Phytophthora parasitica P10297] >gi|570978888|gb|ETP39979.1| hypothetical protein, variant 3 [Phytophthora parasitica P10297]) HSP 1 Score: 70.0922 bits (170), Expect = 1.917e-10 Identity = 62/193 (32.12%), Postives = 92/193 (47.67%), Query Frame = 0
Query: 32 GWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGV-----SMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLA--RGD-SALFEILRSLGGHCASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPP 216
++LDI LDYFST NPF LE G AA + V F + ++++ ++ +E F ELI FE S +E V ++ EL PL N+ E + + F+E+L R D +A EI S G LP H SS EEI+ M+ + + + PP++V +A+S D + PP
Sbjct: 79 AFILDIDLDYFSTWNPFRKDLETHIGEAAVKTVTQVFSSVRYKQEPLDLVTAQQRTSERRVFC----ELIKHFEASDALEDASKRASEWVQVVK-ELAPLYIENVDVE---KLFDEFIEILEQYRDDKNARHEIWAS--GPFLDLPHHESSLEEIERMVNELERFLRTHSLDSSNPPAIVAIAKSTGDEFLPP 261
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|668460568|gb|KFB48202.1| (AGAP005414-PA-like protein [Anopheles sinensis]) HSP 1 Score: 70.0922 bits (170), Expect = 3.170e-10 Identity = 67/251 (26.69%), Postives = 110/251 (43.82%), Query Frame = 0
Query: 4 EGRKALNLRVCTADDHKTLFSVPPVVQGGWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFE-VSGVSMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLA---------RGDSALFEILRSLGGHC--ASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRN---IQLLGPL 239
E +K L L VC+ ++K + GG++LDI LDYFST NPFL ++ Q E + F +P E ++ +++ R+ RE E + + + E V ++ L + +E S +V A + + + ++ G C LP H SS EEI+ M+ Q +E + C P V+ ++RS D YTP + +Q+ VL AL ++L P+
Sbjct: 218 ENKKRLQLEVCSVGEYKVAEDTD--LAGGYILDIDLDYFSTHNPFLKIYDKVQ---LYEKLKDIFVSP--------ELADDDTGSDLEKLQRVAREREEKLEFLESIFLYLEEVGNLKHFL-----VDYQQEISDEYAGLLEKVTALVRTLKKEYKEEEIDWSMIYDAGCTCDVTDLPHHESSREEIETMVQQ----LEHFLRQLPCAPVVITISRSSEDDYTPAEQVEMIQDMVLGALTKCLRVELDNPI 446
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|568014573|gb|ETL88750.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568014574|gb|ETL88751.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568014575|gb|ETL88752.1| hypothetical protein, variant 3 [Phytophthora parasitica]) HSP 1 Score: 69.3218 bits (168), Expect = 3.671e-10 Identity = 64/193 (33.16%), Postives = 94/193 (48.70%), Query Frame = 0
Query: 32 GWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGV-----SMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLA--RGD-SALFEILRSLGGHCASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPP 216
++LDI LDYFST NPF LE G AA + V F + + ++E LE V + + R+ ELI FE S +E V ++ EL PL N+ E + + F+E+L R D +A EI S G LP H SS EEI+ ++ + + + PP++V +A+S D + PP
Sbjct: 79 AFILDIDLDYFSTWNPFRKDLETHIGEAAVKTVTQVFSSVRY-KQEPLELVTAQQRTSER---RVFCELIKHFEASDALEDASKRASEWVQVVK-ELAPLYIENVDVE---KLFDEFIEILEQYRDDKNARHEIWAS--GPFLDLPHHESSLEEIERIVNELERFLRTHSLDSSNPPAIVAIAKSTGDEFLPP 261
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|762156276|ref|XP_011416262.1| (PREDICTED: UPF0489 protein C5orf22 homolog isoform X1 [Crassostrea gigas]) HSP 1 Score: 70.0922 bits (170), Expect = 3.756e-10 Identity = 54/207 (26.09%), Postives = 97/207 (46.86%), Query Frame = 0
Query: 31 GGWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGVSMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLARGDSALFEILRSLGGHC--ASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNIQL 235
G +LDI LD++ST+NPFL Q +E L FQAP E +EA + + E+ L +E + + S +++ + I+ ++ L GD+ F++L G C LP H S+ E+++ ++ T + + L + P+++ +ARS +D Y PP +++Q VL+ L+++ L
Sbjct: 330 GTVILDIDLDFYSTKNPFLEVFTPSQYKILQE--LYRFQAPTSNSDEDIEACVVKREKELN---HLKQEFLKFSQCSEPLLSHPKANQIKALVEDLQSCQT----------------EGGDAVNFDLLHEAGCTCDDTELPHHVSNQEQMNLLVDATQEFLSHLKR-----PTIITMARSSQDDYCPPDQVESIQNSVLEILQDLYL 510
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|762156278|ref|XP_011416263.1| (PREDICTED: UPF0489 protein C5orf22 homolog isoform X2 [Crassostrea gigas]) HSP 1 Score: 70.0922 bits (170), Expect = 4.007e-10 Identity = 54/207 (26.09%), Postives = 97/207 (46.86%), Query Frame = 0
Query: 31 GGWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGVSMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLARGDSALFEILRSLGGHC--ASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNIQL 235
G +LDI LD++ST+NPFL Q +E L FQAP E +EA + + E+ L +E + + S +++ + I+ ++ L GD+ F++L G C LP H S+ E+++ ++ T + + L + P+++ +ARS +D Y PP +++Q VL+ L+++ L
Sbjct: 250 GTVILDIDLDFYSTKNPFLEVFTPSQYKILQE--LYRFQAPTSNSDEDIEACVVKREKELN---HLKQEFLKFSQCSEPLLSHPKANQIKALVEDLQSCQT----------------EGGDAVNFDLLHEAGCTCDDTELPHHVSNQEQMNLLVDATQEFLSHLKR-----PTIITMARSSQDDYCPPDQVESIQNSVLEILQDLYL 430
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|675200387|ref|XP_008909078.1| (hypothetical protein PPTG_14265 [Phytophthora parasitica INRA-310] >gi|566019165|gb|ETI42076.1| hypothetical protein F443_12717 [Phytophthora parasitica P1569] >gi|567956497|gb|ETK82118.1| hypothetical protein L915_12437 [Phytophthora parasitica] >gi|567985180|gb|ETL35527.1| hypothetical protein L916_12344 [Phytophthora parasitica] >gi|568044827|gb|ETM42007.1| hypothetical protein L914_12268 [Phytophthora parasitica] >gi|568090727|gb|ETN05556.1| hypothetical protein PPTG_14265 [Phytophthora parasitica INRA-310] >gi|570322752|gb|ETO70700.1| hypothetical protein F444_12822 [Phytophthora parasitica P1976] >gi|570946564|gb|ETP11821.1| hypothetical protein F441_12677 [Phytophthora parasitica CJ01A1] >gi|570978885|gb|ETP39976.1| hypothetical protein F442_12623 [Phytophthora parasitica P10297]) HSP 1 Score: 69.707 bits (169), Expect = 4.859e-10 Identity = 65/210 (30.95%), Postives = 98/210 (46.67%), Query Frame = 0
Query: 32 GWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGV-----SMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLA--RGD-SALFEILRSLGGHCASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNI 233
++LDI LDYFST NPF LE G AA + V F + ++++ ++ +E F ELI FE S +E V ++ EL PL N+ E + + F+E+L R D +A EI S G LP H SS EEI+ M+ + + + PP++V +A+S D + PP + + VL L +
Sbjct: 176 AFILDIDLDYFSTWNPFRKDLETHIGEAAVKTVTQVFSSVRYKQEPLDLVTAQQRTSERRVFC----ELIKHFEASDALEDASKRASEWVQVVK-ELAPLYIENVDVE---KLFDEFIEILEQYRDDKNARHEIWAS--GPFLDLPHHESSLEEIERMVNELERFLRTHSLDSSNPPAIVAIAKSTGDEFLPPHQLNFVLPNVLRMLERV 375
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|568014572|gb|ETL88749.1| (hypothetical protein L917_12187 [Phytophthora parasitica]) HSP 1 Score: 68.9366 bits (167), Expect = 7.356e-10 Identity = 67/210 (31.90%), Postives = 100/210 (47.62%), Query Frame = 0
Query: 32 GWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGV-----SMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLA--RGD-SALFEILRSLGGHCASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNI 233
++LDI LDYFST NPF LE G AA + V F + + ++E LE V + + R+ ELI FE S +E V ++ EL PL N+ E + + F+E+L R D +A EI S G LP H SS EEI+ ++ + + + PP++V +A+S D + PP + + VL L +
Sbjct: 176 AFILDIDLDYFSTWNPFRKDLETHIGEAAVKTVTQVFSSVRY-KQEPLELVTAQQRTSER---RVFCELIKHFEASDALEDASKRASEWVQVVK-ELAPLYIENVDVE---KLFDEFIEILEQYRDDKNARHEIWAS--GPFLDLPHHESSLEEIERIVNELERFLRTHSLDSSNPPAIVAIAKSTGDEFLPPHQLNFVLPNVLRMLERV 375 The following BLAST results are available for this feature:
BLAST of EWM21336.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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