EWM21336.1, cds9318 (CDS) Nannochloropsis gaditana

Overview
NameEWM21336.1
Unique Namecds9318
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:29494..29760 -
Alignment locationKK037253.1:29039..29354 -
Alignment locationKK037253.1:28876..28961 -
Alignment locationKK037253.1:28699..28800 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21336.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100075g29.2870.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:29494..29760 -
KK037253.1supercontigKK037253.1:29039..29354 -
KK037253.1supercontigKK037253.1:28876..28961 -
KK037253.1supercontigKK037253.1:28699..28800 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR024131UPF0489
Homology
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|585101521|gb|EWM21336.1| (hypothetical protein Naga_100075g29 [Nannochloropsis gaditana])

HSP 1 Score: 523.087 bits (1346), Expect = 0.000e+0
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
Query:    1 MEPEGRKALNLRVCTADDHKTLFSVPPVVQGGWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGVSMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLARGDSALFEILRSLGGHCASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNIQLLGPLRVLAHYLALEEEESGGE 256
            MEPEGRKALNLRVCTADDHKTLFSVPPVVQGGWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGVSMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLARGDSALFEILRSLGGHCASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNIQLLGPLRVLAHYLALEEEESGGE
Sbjct:    1 MEPEGRKALNLRVCTADDHKTLFSVPPVVQGGWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGVSMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLARGDSALFEILRSLGGHCASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNIQLLGPLRVLAHYLALEEEESGGE 256          
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|919035021|ref|XP_013401052.1| (PREDICTED: UPF0489 protein C5orf22 homolog [Lingula anatina])

HSP 1 Score: 72.0182 bits (175), Expect = 9.002e-11
Identity = 68/237 (28.69%), Postives = 101/237 (42.62%), Query Frame = 0
Query:   13 VCTADDHKT--LFSVPPVVQGGWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGVSMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLARGDSALFEILRSLGGHC--ASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNIQLLGPLRVLAHY 245
            +C  D   T  + S        ++LDI LD++STQNPF +   E Q        L YF+ P   R    EA     +     FL+      N+F+      T   +    +E D         +  + V    +++     S  FE L  +G  C    LP H SS EEI A++  T  +VE L       P ++ ++RS  D Y PPS  D +Q +VLD L+  ++ G L +   Y
Sbjct:  283 ICNNDSTVTRIVNSAEKTSSKAYILDIDLDFYSTQNPFKITYTEKQFEILNR--LYYFKRPSLGR----EAEGTREREAQLNFLQ------NVFKDLSTGKTFHEIKTSTQEKD--------LQKIKLVEELVLDLQKNTASIDFEWLHEVGCTCDDTELPHHISSPEEIHALVRATKSSVELL----PVNPIMITISRSSEDDYCPPSQVDFIQTQVLDMLK--EVYGQLDIRYDY 493          
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|405975615|gb|EKC40169.1| (UPF0489 protein C5orf22-like protein [Crassostrea gigas])

HSP 1 Score: 70.8626 bits (172), Expect = 1.836e-10
Identity = 55/209 (26.32%), Postives = 102/209 (48.80%), Query Frame = 0
Query:   29 VQGGWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGVSMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLARGDSALFEILRSLGGHC--ASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNIQL 235
            + G  +LDI LD++ST+NPFL      Q    +E  L  FQAP     E +EA   + + E+     L +E +   + S   +++ +   I+  ++ L       ++ Q+           GD+  F++L   G  C    LP H S+ E+++ ++  T + +  L +     P+++ +ARS +D Y PP   +++Q  VL+ L+++ L
Sbjct:  238 LHGTVILDIDLDFYSTKNPFLEVFTPSQYKILQE--LYRFQAPTSNSDEDIEACVVKREKELN---HLKQEFLKFSQCSEPLLSHPKANQIKALVEDL-------QSCQT---------EGGDAVNFDLLHEAGCTCDDTELPHHVSNQEQMNLLVDATQEFLSHLKR-----PTIITMARSSQDDYCPPDQVESIQNSVLEILQDLYL 420          
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|675200389|ref|XP_008909079.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|675200391|ref|XP_008909080.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|675200393|ref|XP_008909081.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >gi|566019166|gb|ETI42077.1| hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|566019167|gb|ETI42078.1| hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|566019168|gb|ETI42079.1| hypothetical protein, variant 3 [Phytophthora parasitica P1569] >gi|567956498|gb|ETK82119.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567956499|gb|ETK82120.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567956500|gb|ETK82121.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|567985181|gb|ETL35528.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567985182|gb|ETL35529.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567985183|gb|ETL35530.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568044828|gb|ETM42008.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568044829|gb|ETM42009.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568044830|gb|ETM42010.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568090728|gb|ETN05557.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|568090729|gb|ETN05558.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|568090730|gb|ETN05559.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >gi|570322753|gb|ETO70701.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570322754|gb|ETO70702.1| hypothetical protein, variant 2 [Phytophthora parasitica P1976] >gi|570322755|gb|ETO70703.1| hypothetical protein, variant 3 [Phytophthora parasitica P1976] >gi|570946565|gb|ETP11822.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >gi|570946566|gb|ETP11823.1| hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >gi|570946567|gb|ETP11824.1| hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >gi|570978886|gb|ETP39977.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297] >gi|570978887|gb|ETP39978.1| hypothetical protein, variant 2 [Phytophthora parasitica P10297] >gi|570978888|gb|ETP39979.1| hypothetical protein, variant 3 [Phytophthora parasitica P10297])

HSP 1 Score: 70.0922 bits (170), Expect = 1.917e-10
Identity = 62/193 (32.12%), Postives = 92/193 (47.67%), Query Frame = 0
Query:   32 GWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGV-----SMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLA--RGD-SALFEILRSLGGHCASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPP 216
             ++LDI LDYFST NPF   LE   G AA + V   F +  ++++       ++  +E   F     ELI  FE S          +E V  ++ EL PL   N+  E    + + F+E+L   R D +A  EI  S  G    LP H SS EEI+ M+ +  + +         PP++V +A+S  D + PP
Sbjct:   79 AFILDIDLDYFSTWNPFRKDLETHIGEAAVKTVTQVFSSVRYKQEPLDLVTAQQRTSERRVFC----ELIKHFEASDALEDASKRASEWVQVVK-ELAPLYIENVDVE---KLFDEFIEILEQYRDDKNARHEIWAS--GPFLDLPHHESSLEEIERMVNELERFLRTHSLDSSNPPAIVAIAKSTGDEFLPP 261          
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|668460568|gb|KFB48202.1| (AGAP005414-PA-like protein [Anopheles sinensis])

HSP 1 Score: 70.0922 bits (170), Expect = 3.170e-10
Identity = 67/251 (26.69%), Postives = 110/251 (43.82%), Query Frame = 0
Query:    4 EGRKALNLRVCTADDHKTLFSVPPVVQGGWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFE-VSGVSMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLA---------RGDSALFEILRSLGGHC--ASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRN---IQLLGPL 239
            E +K L L VC+  ++K        + GG++LDI LDYFST NPFL   ++ Q     E +   F +P        E   ++  +++    R+ RE     E +  + +  E V  ++  L      +  +E S        +V A         + +   + ++   G  C    LP H SS EEI+ M+ Q    +E   +   C P V+ ++RS  D YTP    + +Q+ VL AL     ++L  P+
Sbjct:  218 ENKKRLQLEVCSVGEYKVAEDTD--LAGGYILDIDLDYFSTHNPFLKIYDKVQ---LYEKLKDIFVSP--------ELADDDTGSDLEKLQRVAREREEKLEFLESIFLYLEEVGNLKHFL-----VDYQQEISDEYAGLLEKVTALVRTLKKEYKEEEIDWSMIYDAGCTCDVTDLPHHESSREEIETMVQQ----LEHFLRQLPCAPVVITISRSSEDDYTPAEQVEMIQDMVLGALTKCLRVELDNPI 446          
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|568014573|gb|ETL88750.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568014574|gb|ETL88751.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568014575|gb|ETL88752.1| hypothetical protein, variant 3 [Phytophthora parasitica])

HSP 1 Score: 69.3218 bits (168), Expect = 3.671e-10
Identity = 64/193 (33.16%), Postives = 94/193 (48.70%), Query Frame = 0
Query:   32 GWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGV-----SMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLA--RGD-SALFEILRSLGGHCASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPP 216
             ++LDI LDYFST NPF   LE   G AA + V   F +  + ++E LE V  + +       R+  ELI  FE S          +E V  ++ EL PL   N+  E    + + F+E+L   R D +A  EI  S  G    LP H SS EEI+ ++ +  + +         PP++V +A+S  D + PP
Sbjct:   79 AFILDIDLDYFSTWNPFRKDLETHIGEAAVKTVTQVFSSVRY-KQEPLELVTAQQRTSER---RVFCELIKHFEASDALEDASKRASEWVQVVK-ELAPLYIENVDVE---KLFDEFIEILEQYRDDKNARHEIWAS--GPFLDLPHHESSLEEIERIVNELERFLRTHSLDSSNPPAIVAIAKSTGDEFLPP 261          
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|762156276|ref|XP_011416262.1| (PREDICTED: UPF0489 protein C5orf22 homolog isoform X1 [Crassostrea gigas])

HSP 1 Score: 70.0922 bits (170), Expect = 3.756e-10
Identity = 54/207 (26.09%), Postives = 97/207 (46.86%), Query Frame = 0
Query:   31 GGWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGVSMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLARGDSALFEILRSLGGHC--ASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNIQL 235
            G  +LDI LD++ST+NPFL      Q    +E  L  FQAP     E +EA   + + E+     L +E +   + S   +++ +   I+  ++ L                       GD+  F++L   G  C    LP H S+ E+++ ++  T + +  L +     P+++ +ARS +D Y PP   +++Q  VL+ L+++ L
Sbjct:  330 GTVILDIDLDFYSTKNPFLEVFTPSQYKILQE--LYRFQAPTSNSDEDIEACVVKREKELN---HLKQEFLKFSQCSEPLLSHPKANQIKALVEDLQSCQT----------------EGGDAVNFDLLHEAGCTCDDTELPHHVSNQEQMNLLVDATQEFLSHLKR-----PTIITMARSSQDDYCPPDQVESIQNSVLEILQDLYL 510          
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|762156278|ref|XP_011416263.1| (PREDICTED: UPF0489 protein C5orf22 homolog isoform X2 [Crassostrea gigas])

HSP 1 Score: 70.0922 bits (170), Expect = 4.007e-10
Identity = 54/207 (26.09%), Postives = 97/207 (46.86%), Query Frame = 0
Query:   31 GGWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGVSMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLARGDSALFEILRSLGGHC--ASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNIQL 235
            G  +LDI LD++ST+NPFL      Q    +E  L  FQAP     E +EA   + + E+     L +E +   + S   +++ +   I+  ++ L                       GD+  F++L   G  C    LP H S+ E+++ ++  T + +  L +     P+++ +ARS +D Y PP   +++Q  VL+ L+++ L
Sbjct:  250 GTVILDIDLDFYSTKNPFLEVFTPSQYKILQE--LYRFQAPTSNSDEDIEACVVKREKELN---HLKQEFLKFSQCSEPLLSHPKANQIKALVEDLQSCQT----------------EGGDAVNFDLLHEAGCTCDDTELPHHVSNQEQMNLLVDATQEFLSHLKR-----PTIITMARSSQDDYCPPDQVESIQNSVLEILQDLYL 430          
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|675200387|ref|XP_008909078.1| (hypothetical protein PPTG_14265 [Phytophthora parasitica INRA-310] >gi|566019165|gb|ETI42076.1| hypothetical protein F443_12717 [Phytophthora parasitica P1569] >gi|567956497|gb|ETK82118.1| hypothetical protein L915_12437 [Phytophthora parasitica] >gi|567985180|gb|ETL35527.1| hypothetical protein L916_12344 [Phytophthora parasitica] >gi|568044827|gb|ETM42007.1| hypothetical protein L914_12268 [Phytophthora parasitica] >gi|568090727|gb|ETN05556.1| hypothetical protein PPTG_14265 [Phytophthora parasitica INRA-310] >gi|570322752|gb|ETO70700.1| hypothetical protein F444_12822 [Phytophthora parasitica P1976] >gi|570946564|gb|ETP11821.1| hypothetical protein F441_12677 [Phytophthora parasitica CJ01A1] >gi|570978885|gb|ETP39976.1| hypothetical protein F442_12623 [Phytophthora parasitica P10297])

HSP 1 Score: 69.707 bits (169), Expect = 4.859e-10
Identity = 65/210 (30.95%), Postives = 98/210 (46.67%), Query Frame = 0
Query:   32 GWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGV-----SMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLA--RGD-SALFEILRSLGGHCASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNI 233
             ++LDI LDYFST NPF   LE   G AA + V   F +  ++++       ++  +E   F     ELI  FE S          +E V  ++ EL PL   N+  E    + + F+E+L   R D +A  EI  S  G    LP H SS EEI+ M+ +  + +         PP++V +A+S  D + PP   + +   VL  L  +
Sbjct:  176 AFILDIDLDYFSTWNPFRKDLETHIGEAAVKTVTQVFSSVRYKQEPLDLVTAQQRTSERRVFC----ELIKHFEASDALEDASKRASEWVQVVK-ELAPLYIENVDVE---KLFDEFIEILEQYRDDKNARHEIWAS--GPFLDLPHHESSLEEIERMVNELERFLRTHSLDSSNPPAIVAIAKSTGDEFLPPHQLNFVLPNVLRMLERV 375          
BLAST of EWM21336.1 vs. NCBI_GenBank
Match: gi|568014572|gb|ETL88749.1| (hypothetical protein L917_12187 [Phytophthora parasitica])

HSP 1 Score: 68.9366 bits (167), Expect = 7.356e-10
Identity = 67/210 (31.90%), Postives = 100/210 (47.62%), Query Frame = 0
Query:   32 GWVLDICLDYFSTQNPFLVALEEDQGPAAREAVLAYFQAPHFRRKEALEAVPEEVKAEMAAFLRLTRELINLFEVSGV-----SMTNERVTAIREELDPLMGSNLPRETSQSVTNAFVEVLA--RGD-SALFEILRSLGGHCASLPSHCSSWEEIDAMIVQTAKAVEGLCQAYGCPPSVVFLARSVRDGYTPPSIGDALQEKVLDALRNI 233
             ++LDI LDYFST NPF   LE   G AA + V   F +  + ++E LE V  + +       R+  ELI  FE S          +E V  ++ EL PL   N+  E    + + F+E+L   R D +A  EI  S  G    LP H SS EEI+ ++ +  + +         PP++V +A+S  D + PP   + +   VL  L  +
Sbjct:  176 AFILDIDLDYFSTWNPFRKDLETHIGEAAVKTVTQVFSSVRY-KQEPLELVTAQQRTSER---RVFCELIKHFEASDALEDASKRASEWVQVVK-ELAPLYIENVDVE---KLFDEFIEILEQYRDDKNARHEIWAS--GPFLDLPHHESSLEEIERIVNELERFLRTHSLDSSNPPAIVAIAKSTGDEFLPPHQLNFVLPNVLRMLERV 375          
The following BLAST results are available for this feature:
BLAST of EWM21336.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101521|gb|EWM21336.1|0.000e+0100.00hypothetical protein Naga_100075g29 [Nannochlorops... [more]
gi|919035021|ref|XP_013401052.1|9.002e-1128.69PREDICTED: UPF0489 protein C5orf22 homolog [Lingul... [more]
gi|405975615|gb|EKC40169.1|1.836e-1026.32UPF0489 protein C5orf22-like protein [Crassostrea ... [more]
gi|675200389|ref|XP_008909079.1|1.917e-1032.12hypothetical protein, variant 1 [Phytophthora para... [more]
gi|668460568|gb|KFB48202.1|3.170e-1026.69AGAP005414-PA-like protein [Anopheles sinensis][more]
gi|568014573|gb|ETL88750.1|3.671e-1033.16hypothetical protein, variant 1 [Phytophthora para... [more]
gi|762156276|ref|XP_011416262.1|3.756e-1026.09PREDICTED: UPF0489 protein C5orf22 homolog isoform... [more]
gi|762156278|ref|XP_011416263.1|4.007e-1026.09PREDICTED: UPF0489 protein C5orf22 homolog isoform... [more]
gi|675200387|ref|XP_008909078.1|4.859e-1030.95hypothetical protein PPTG_14265 [Phytophthora para... [more]
gi|568014572|gb|ETL88749.1|7.356e-1031.90hypothetical protein L917_12187 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9348rna9348Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications