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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100357g4.4701.mrna |
| Orig protein id | gnl|cribi|Naga_100357g4.4701 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037253.1 | supercontig | KK037253.1:20740..22330 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9345 ID=rna9345|Name=rna9345|organism=Nannochloropsis gaditana|type=mRNA|length=2937bp
ATGGGGCCGTATTTCCACTTCCGACGTCCTCAGAAGCCGAACACTAGCAC
ACCCCGCAGCACGCGTGTAGGAACCCTCGGCGGAAGCACTCCCCGGGGCT
TCGCCGCCTTCTTCCATTCCCTCCCTCCTCCCTCGAACGCAACGGGCACC
CTTTCCCCGTCCCAAAAATGTTTCCGCTTCTTTGCCCGCGACCAGGGCAA
TTTCTTCAGCAGCCACGGTCCCGAGGCACGAGACCTGGCGGCCCGTTTCT
ATTCCACCCAAACTGTTGTCCGCAGCCAGGGGGGCCTGTCCTCTCTCTCC
ATCTCCCGCAAGCTCTTTGCCTCCCGCGTGCTGCCCTCCCTCATGGCATC
GGGCGCGGCTGTGGAGATATGGGAGCAGGCGGCGGGAGAAGGGAGCGAGC
AGGAGGAGTGGTTCGTGGCCCGGGCGGGGAGGCCTGGGGACACGCGCGCT
CTGGAGGACGTCATGCTGGCGTTCTCGGGACAGGGTGCCTCGCAAGCCGA
GCAAGAAGCATCGTCGCTGATAGGCACAGGGGTGACAATGGCTGTGCTGG
TGCAGGAGGGAGGGGCGGGCAGAGGCGCGGTCTTCGGCGTGGCGGTGGCC
AACACTTCTTTCCGAACCTTGGCGCTGGGTGAATTGGAGGATGCTGGTGA
CCCGAAGACGTTAGAGTCGTTGGTCGTGCAGCTGGCACCGCTCAAGCGGG
CCCTACTCAGCGCGGACGCCCTCCTGTCCCACCTTGGCTTGCTCCCTGAG
GGAAGCGGGGAAATAGGAGGGGCGGGAGGGGATGGCGAGGACGGCTGGGA
AGTCTCCCTCCTGAAGCCCGAGCACCTCCTCCAGTACGACGCCGCCGCCG
CCAGGGTGGTTGTGGGTGGCAGAGGGTGCGAGGGGGGTCTCTGGCTGGGA
CGGCGTCGAGGAGGGGGAAGGCGGCTGTTTGCGAGGTTGAGAGGCAGTCT
CCATGCGTCTTCGACTCAATTTGCCCGCCCACAGCCCTTTGACGGGGGCC
GGCCCTCCCCAGCGGATCGGTGGCTGCAGGCTCCGCTCTTGGCCCCCGCG
GCGATCCGGGACCGACAGTCCATCGTTTCCCTCCTCCGCAGCGACCCCTC
CCTCCTTTCCGCCCTCCACGAGTGCTACGGCGCCAGCTCTTTGACAGGTC
GTGGGACCGTCTTCCGAGGAACCCCCGACCTGGAGCGAACGGCCCAGCGG
TTCCTGTCCTTGCCGACCTCCTCCTCGAGCAGCCCCGCCAGGCCCCGTGT
GGGCCTTCGGGACTTGCTGGAGGTGTATACGGCCGCCCTCACCCTCGGTC
GGCTCTCTGACGCCCTCTCATCCCTCGCCGACGCGACCTGCCCGGCCCTG
GACGCGCTGCTCCGCCTTCCCTTGGCGAGGGTGGTGGCTGCATTGGCGCG
CTTTCAGGCCCTGGTGGAGGAGGTGGTGGACGTGGATCGCCTGGTGAGCA
CGCACGGGCGCGAGGTGGCGGTGAAGCCCTCGTTCGACCCCTTGCTGCTC
AGCCTGCGCGACCAAATGGAGGCCCTGACGCGGCGGATGGAGGACACGGC
CAGGCGGGCCTCGAAGGACCTCTATGGGCAAGCGAAGGACGCCGACAAGC
GCGTCAAGCTCGACTGGAGTGCTGTGCATCAGCACCACCTGCGAGTCACC
AAGAAGGATCAACGGGCACTGAAGGAGAGCGGAGCGAGTCTCCAAATTCA
GACCCTGAGTGTCCAGAAGCACGGCCAGCTCTTTACCACGCCAAGCTTGA
AAGAGCTATCAAGGCGGTGGGCTGCGCATCAGGCGGAGTATCTGCAGGTG
CAAGAGGCTCTGGTCGCGCAGGCCGTGAGCGTGGGGAGGTCCTACGTCAA
GCAGATGCAGCGAGGGGGAAGGCTCTTGGCCGCGATCGACGTCTTCCTTT
CCCTCGCCCAGGTGGCGAACGAGCTGAACTGGTGCCCGCCCACCTTGCTG
GACGACAAGGACGGGACCCGCCGGGAACTGCACATCACCCAGCTCCGGCA
CCCCGTGGTGGAGGCCGCACTGCCCTCCGCCGCCGACTTCATTCCCAATG
ACGTCCACCTCTCGGCCGCCTCGCCCATTCGGGACCCTCCCTCCCAGGGC
AGTTGTCTCAGCCTCGTCACAGGCCCCAACTGCGGAGGAAAGTCCACCTA
CATCCGGAGCGTGGGGATCGCCGTTCTCCTGGCGCAAGTCGGGGCTTGCG
TCCCGGCGACGGCGATGGAGTGGACCTTGATCGACAAGGTGCTCTGTCGC
GTGGGCGCGAGCGACAATCAACTCCAGGGCGTCTCCACTTTTATGGCCGA
GATGTTGGAAACGCACGCCCTTCTCGCGGCGGCTACCCCCCGCTCCCTGG
TGATCGTGGACGAGCTGGGCCGGGGCACTAGCACCTTCGACGGCTTCGGC
CTCGCCTGGGCGGTGGCGGAGCGGCTTGCCAACTCGACTGCAATGCAGTG
CCGGACCCTCTTCGCCACCCACTTCCACGAACTCTGCGACATGGAGCAGG
CCTTGCCCCCCGGGCGCGTGCAGAATCTCCATTTCTCCGCCGAGACTCCT
GCCTCCCACCCCGCCACTGCCGCCTCCTCCGACCTGGTGCTCACCTACCG
AGTCCGACCCGGGCCCTGCGACCGCTCCTTCGGCGTGCACGTCGCGCGTC
TGGCCAAGTTTCCCGAGGAAATCGTGCGGGAGGCAGCGGCCCGTGTGGAA
GCCCTGCAAGCCGGAGGCCTTCGTGCCTTGACGTCGGAGCAGCAGGCGCG
ATTGGCCGAGAAGAAGCGGGCTTGGGAGGACGAGGAGGAGGGTCGATTGA
AGCGGGCGAGGGCAGCCGCGCGCGCGCGACAGAGGAAGGCGGTGGAGGCG
CTGGCAGCGTTGCCGTCCTTGGAAGACGTGGCTCTGGGGGAGGCATTAGA
AGGGGTTGTTGCCCTGGTGGAGGCCAACGTAAAGTGA back to topprotein sequence of rna9345 >rna9345-protein ID=rna9345-protein|Name=rna9345|organism=Nannochloropsis gaditana|type=polypeptide|length=460bp
MPFAHSTLAQKSTSLALHVAPPPIQKMMRSFKLSLCSLALFAGAALAGEE
SVYTPPPYQSSGTPVETQDVTVAPTATPTATPTAAPTPVPTKPVYTPPPT
PAPTEAAYIAKPETLDESEVPTSAPTGTPTPAPTPAPTPAPTPAPTPAPT
PAPTPAPTPAPTPAPTPAPTGAPTPAPTPAPTPAPTGAPTPFPTFAPTAP
PTATPTAAPTTAAPTPAPTGGPYGPPDRRAHARSHQAGLHPPPTATPTAA
PTAHPTAAPTKPVYTPPPTASPTPAPTAAPTPAPTAAPTPAPTATPTAAP
TPDMDFDPNGSGASVYSKPPTPAPTEAAYTKPPYKPEDSKTRRLRQAALG
SIPSTGPLKHFSRSKLNCELEEKNMSPLSVVGIEKEYWSVCTKGSSSQGC
VHVGKLRVHGDRVCKLSPTCLEKDSGSILRRNIYVRIPRYPFTVLNRLYN
NRRRQSLNSL back to topmRNA from alignment at KK037253.1:20740..22330- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9345 ID=rna9345|Name=rna9345|organism=Nannochloropsis gaditana|type=mRNA|length=1591bp|location=Sequence derived from alignment at KK037253.1:20740..22330- (Nannochloropsis gaditana)
ATGCCATTTGCGCATTCCACCCTTGCACAGAAAAGTACAAGTCTCGCACT
TCACGTCGCACCACCTCCAATTCAAAAAATGATGCGTTCATTCAAACTCT
CTTTATGCTCCTTGGCCCTCTTCGCCGGCGCCGCCCTTGCTGGTGAAGAA
AGCGTCTACACTCCTCCTCCCTACCAATCCTCGGGCACTCCTGTTGAGAC
GCAGGACGTGACGGTGGCGCCCACGGCCACCCCCACGGCCACCCCCACCG
CCGCGCCTACTCCTGTCCCCACCAAGCCCGTCTACACACCCCCTCCCACC
CCCGCGCCCACTGAAGCCGCCTACATCGCCAAGCCCGAAACTCTGGACGA
GAGTGAAGTCCCGACCAGCGCTCCCACGGGGACTCCCACCCCTGCTCCTA
CTCCCGCCCCCACACCTGCTCCTACCCCTGCTCCTACTCCCGCCCCCACG
CCTGCTCCTACTCCCGCCCCTACGCCTGCTCCTACCCCTGCTCCTACTCC
CGCCCCTACGGGCGCTCCTACCCCTGCTCCCACCCCTGCTCCTACTCCCG
CCCCCACAGGTGCCCCTACCCCCTTCCCTACCTTCGCCCCGACCGCGCCC
CCCACGGCAACTCCTACTGCAGCCCCTACGACCGCGGCTCCCACTCCTGC
GCCTACTGGGGGCCCCTACGGCCCACCCGACCGCCGCGCCCACGCCCGCT
CCCACCAAGCCGGTCTACATCCCCCCCCCACCGCCACGCCCACGGCTGCC
CCTACGGCCCACCCCACCGCCGCTCCCACCAAGCCGGTCTACACACCCCC
CCCTACCGCGTCCCCGACGCCGGCTCCTACCGCCGCGCCCACTCCTGCGC
CCACGGCCGCTCCTACACCCGCCCCAACGGCCACGCCCACCGCGGCACCG
ACTCCGGACATGGACTTCGACCCCAACGGTTCGGGCGCCAGCGTTTACAG
CAAACCCCCGACCCCGGCACCCACCGAGGCCGCCTACACCAAGCCCCCCT
ACAAGCCCGAGGATAGCAAGACCCGCCGCCTGCGACAGGCGTAAAGTTCT
CAGGACTTTTAGATTCTTTAGAGTACGTGAGGCTCAAGGCGAAGGCAAGT
GGCTAGGAGTGTCAAAGCATTGCATAGTATGATTTGAAGCGTTGGGTCGG
GTCTAGTTACAAAATTGAAGGCTTGTAGAGCACCAGGGCGCTTGGAAGTA
TACCGTCGACTGGTCCCTTAAAGCATTTCTCCAGGTCAAAATTGAACTGT
GAATTGGAGGAAAAAAATATGTCACCTTTGTCAGTGGTCGGTATCGAAAA
AGAGTACTGGAGTGTATGTACGAAAGGGAGGTCAATGGCATGTACATGAT
CCCACAGAGCTTGATAGATGCCGCAAGATGAACGATAAAAAGCTCCAGCC
AAGGTTGTGTGCATGTAGGGAAATTGAGAGTCCATGGCGATAGGGTCTGT
AAGCTCAGTCCAACCTGTCTAGAAAAGGATTCTGGGTCGATTTTACGGAG
AAATATCTATGTAAGAATCCCCAGATACCCTTTCACTGTGCTTAACCGCC
TTTACAACAATCGAAGAAGACAGTCACTGAACTCGCTTTGA back to topCoding sequence (CDS) from alignment at KK037253.1:20740..22330- >rna9345 ID=rna9345|Name=rna9345|organism=Nannochloropsis gaditana|type=CDS|length=4149bp|location=Sequence derived from alignment at KK037253.1:20740..22330- (Nannochloropsis gaditana)
CTCCAGCCAAGGTTGTGTGCATGTAGGGAAATTGAGAGTCCATGGCGATA
GGGTCTGTAAGCTCAGTCCAACCTGTCTAGAAAAGGATTCTGGGTCGATT
TTACGGAGAAATATCTATGTAAGAATCCCCAGATACCCTTTCACTGTGCT
TAACCGCCTTTACAACAATCGAAGAAGACAGTCACTGAACTCGCTTTGAG
GCGCTTGGAAGTATACCGTCGACTGGTCCCTTAAAGCATTTCTCCAGGTC
AAAATTGAACTGTGAATTGGAGGAAAAAAATATGTCACCTTTGTCAGTGG
TCGGTATCGAAAAAGAGTACTGGAGTGTATGTACGAAAGGGAGATGCCAT
TTGCGCATTCCACCCTTGCACAGAAAAGTACAAGTCTCGCACTTCACGTC
GCACCACCTCCAATTCAAAAAATGATGCGTTCATTCAAACTCTCTTTATG
CTCCTTGGCCCTCTTCGCCGGCGCCGCCCTTGCTGGTGAAGAAAGCGTCT
ACACTCCTCCTCCCTACCAATCCTCGGGCACTCCTGTTGAGACGCAGGAC
GTGACGGTGGCGCCCACGGCCACCCCCACGGCCACCCCCACCGCCGCGCC
TACTCCTGTCCCCACCAAGCCCGTCTACACACCCCCTCCCACCCCCGCGC
CCACTGAAGCCGCCTACATCGCCAAGCCCGAAACTCTGGACGAGAGTGAA
GTCCCGACCAGCGCTCCCACGGGGACTCCCACCCCTGCTCCTACTCCCGC
CCCCACACCTGCTCCTACCCCTGCTCCTACTCCCGCCCCCACGCCTGCTC
CTACTCCCGCCCCTACGCCTGCTCCTACCCCTGCTCCTACTCCCGCCCCT
ACGGGCGCTCCTACCCCTGCTCCCACCCCTGCTCCTACTCCCGCCCCCAC
AGGTGCCCCTACCCCCTTCCCTACCTTCGCCCCGACCGCGCCCCCCACGG
CAACTCCTACTGCAGCCCCTACGACCGCGGCTCCCACTCCTGCGCCTACT
GGGGGCCCCTACGGCCCACCCGACCGCCGCGCCCACGCCCGCTCCCACCA
AGCCGGTCTACATCCCCCCCCCACCGCCACGCCCACGGCTGCCCCTACGG
CCCACCCCACCGCCGCTCCCACCAAGCCGGTCTACACACCCCCCCCTACC
GCGTCCCCGACGCCGGCTCCTACCGCCGCGCCCACTCCTGCGCCCACGGC
CGCTCCTACACCCGCCCCAACGGCCACGCCCACCGCGGCACCGACTCCGG
ACATGGACTTCGACCCCAACGGTTCGGGCGCCAGCGTTTACAGCAAACCC
CCGACCCCGGCACCCACCGAGGCCGCCTACACCAAGCCCCCCTACAAGCC
CGAGGATAGCAAGACCCGCCGCCTGCGACAGGCCTCCAGCCAAGGTTGTG
TGCATGTAGGGAAATTGAGAGTCCATGGCGATAGGGTCTGTAAGCTCAGT
CCAACCTGTCTAGAAAAGGATTCTGGGTCGATTTTACGGAGAAATATCTA
TGTAAGAATCCCCAGATACCCTTTCACTGTGCTTAACCGCCTTTACAACA
ATCGAAGAAGACAGTCACTGAACTCGCTTTGAGGCGCTTGGAAGTATACC
GTCGACTGGTCCCTTAAAGCATTTCTCCAGGTCAAAATTGAACTGTGAAT
TGGAGGAAAAAAATATGTCACCTTTGTCAGTGGTCGGTATCGAAAAAGAG
TACTGGAGTGTATGTACGAAAGGGAGATGCCATTTGCGCATTCCACCCTT
GCACAGAAAAGTACAAGTCTCGCACTTCACGTCGCACCACCTCCAATTCA
AAAAATGATGCGTTCATTCAAACTCTCTTTATGCTCCTTGGCCCTCTTCG
CCGGCGCCGCCCTTGCTGGTGAAGAAAGCGTCTACACTCCTCCTCCCTAC
CAATCCTCGGGCACTCCTGTTGAGACGCAGGACGTGACGGTGGCGCCCAC
GGCCACCCCCACGGCCACCCCCACCGCCGCGCCTACTCCTGTCCCCACCA
AGCCCGTCTACACACCCCCTCCCACCCCCGCGCCCACTGAAGCCGCCTAC
ATCGCCAAGCCCGAAACTCTGGACGAGAGTGAAGTCCCGACCAGCGCTCC
CACGGGGACTCCCACCCCTGCTCCTACTCCCGCCCCCACACCTGCTCCTA
CCCCTGCTCCTACTCCCGCCCCCACGCCTGCTCCTACTCCCGCCCCTACG
CCTGCTCCTACCCCTGCTCCTACTCCCGCCCCTACGGGCGCTCCTACCCC
TGCTCCCACCCCTGCTCCTACTCCCGCCCCCACAGGTGCCCCTACCCCCT
TCCCTACCTTCGCCCCGACCGCGCCCCCCACGGCAACTCCTACTGCAGCC
CCTACGACCGCGGCTCCCACTCCTGCGCCTACTGGGGGCCCCTACGGCCC
ACCCGACCGCCGCGCCCACGCCCGCTCCCACCAAGCCGGTCTACATCCCC
CCCCCACCGCCACGCCCACGGCTGCCCCTACGGCCCACCCCACCGCCGCT
CCCACCAAGCCGGTCTACACACCCCCCCCTACCGCGTCCCCGACGCCGGC
TCCTACCGCCGCGCCCACTCCTGCGCCCACGGCCGCTCCTACACCCGCCC
CAACGGCCACGCCCACCGCGGCACCGACTCCGGACATGGACTTCGACCCC
AACGGTTCGGGCGCCAGCGTTTACAGCAAACCCCCGACCCCGGCACCCAC
CGAGGCCGCCTACACCAAGCCCCCCTACAAGCCCGAGGATAGCAAGACCC
GCCGCCTGCGACAGGCCTCCAGCCAAGGTTGTGTGCATGTAGGGAAATTG
AGAGTCCATGGCGATAGGGTCTGTAAGCTCAGTCCAACCTGTCTAGAAAA
GGATTCTGGGTCGATTTTACGGAGAAATATCTATGTAAGAATCCCCAGAT
ACCCTTTCACTGTGCTTAACCGCCTTTACAACAATCGAAGAAGACAGTCA
CTGAACTCGCTTTGAGGCGCTTGGAAGTATACCGTCGACTGGTCCCTTAA
AGCATTTCTCCAGGTCAAAATTGAACTGTGAATTGGAGGAAAAAAATATG
TCACCTTTGTCAGTGGTCGGTATCGAAAAAGAGTACTGGAGTGTATGTAC
GAAAGGGAGATGCCATTTGCGCATTCCACCCTTGCACAGAAAAGTACAAG
TCTCGCACTTCACGTCGCACCACCTCCAATTCAAAAAATGATGCGTTCAT
TCAAACTCTCTTTATGCTCCTTGGCCCTCTTCGCCGGCGCCGCCCTTGCT
GGTGAAGAAAGCGTCTACACTCCTCCTCCCTACCAATCCTCGGGCACTCC
TGTTGAGACGCAGGACGTGACGGTGGCGCCCACGGCCACCCCCACGGCCA
CCCCCACCGCCGCGCCTACTCCTGTCCCCACCAAGCCCGTCTACACACCC
CCTCCCACCCCCGCGCCCACTGAAGCCGCCTACATCGCCAAGCCCGAAAC
TCTGGACGAGAGTGAAGTCCCGACCAGCGCTCCCACGGGGACTCCCACCC
CTGCTCCTACTCCCGCCCCCACACCTGCTCCTACCCCTGCTCCTACTCCC
GCCCCCACGCCTGCTCCTACTCCCGCCCCTACGCCTGCTCCTACCCCTGC
TCCTACTCCCGCCCCTACGGGCGCTCCTACCCCTGCTCCCACCCCTGCTC
CTACTCCCGCCCCCACAGGTGCCCCTACCCCCTTCCCTACCTTCGCCCCG
ACCGCGCCCCCCACGGCAACTCCTACTGCAGCCCCTACGACCGCGGCTCC
CACTCCTGCGCCTACTGGGGGCCCCTACGGCCCACCCGACCGCCGCGCCC
ACGCCCGCTCCCACCAAGCCGGTCTACATCCCCCCCCCACCGCCACGCCC
ACGGCTGCCCCTACGGCCCACCCCACCGCCGCTCCCACCAAGCCGGTCTA
CACACCCCCCCCTACCGCGTCCCCGACGCCGGCTCCTACCGCCGCGCCCA
CTCCTGCGCCCACGGCCGCTCCTACACCCGCCCCAACGGCCACGCCCACC
GCGGCACCGACTCCGGACATGGACTTCGACCCCAACGGTTCGGGCGCCAG
CGTTTACAGCAAACCCCCGACCCCGGCACCCACCGAGGCCGCCTACACCA
AGCCCCCCTACAAGCCCGAGGATAGCAAGACCCGCCGCCTGCGACAGGC back to top
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