EWM21357.1, cds9315 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21357.1 vs. NCBI_GenBank
Match: gi|585101543|gb|EWM21357.1| (hypothetical protein Naga_100357g4 [Nannochloropsis gaditana]) HSP 1 Score: 863.988 bits (2231), Expect = 0.000e+0 Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 0
Query: 1 MPFAHSTLAQKSTSLALHVAPPPIQKMMRSFKLSLCSLALFAGAALAGEESVYTPPPYQSSGTPVETQDVTVAPTATPTATPTAAPTPVPTKPVYTPPPTPAPTEAAYIAKPETLDESEVPTSAPTGTPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTGAPTPAPTPAPTPAPTGAPTPFPTFAPTAPPTATPTAAPTTAAPTPAPTGGPYGPPDRRAHARSHQAGLHPPPTATPTAAPTAHPTAAPTKPVYTPPPTASPTPAPTAAPTPAPTAAPTPAPTATPTAAPTPDMDFDPNGSGASVYSKPPTPAPTEAAYTKPPYKPEDSKTRRLRQAALGSIPSTGPLKHFSRSKLNCELEEKNMSPLSVVGIEKEYWSVCTKGSSSQGCVHVGKLRVHGDRVCKLSPTCLEKDSGSILRRNIYVRIPRYPFTVLNRLYNNRRRQSLNSL 460
MPFAHSTLAQKSTSLALHVAPPPIQKMMRSFKLSLCSLALFAGAALAGEESVYTPPPYQSSGTPVETQDVTVAPTATPTATPTAAPTPVPTKPVYTPPPTPAPTEAAYIAKPETLDESEVPTSAPTGTPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTGAPTPAPTPAPTPAPTGAPTPFPTFAPTAPPTATPTAAPTTAAPTPAPTGGPYGPPDRRAHARSHQAGLHPPPTATPTAAPTAHPTAAPTKPVYTPPPTASPTPAPTAAPTPAPTAAPTPAPTATPTAAPTPDMDFDPNGSGASVYSKPPTPAPTEAAYTKPPYKPEDSKTRRLRQAALGSIPSTGPLKHFSRSKLNCELEEKNMSPLSVVGIEKEYWSVCTKGSSSQGCVHVGKLRVHGDRVCKLSPTCLEKDSGSILRRNIYVRIPRYPFTVLNRLYNNRRRQSLNSL
Sbjct: 1 MPFAHSTLAQKSTSLALHVAPPPIQKMMRSFKLSLCSLALFAGAALAGEESVYTPPPYQSSGTPVETQDVTVAPTATPTATPTAAPTPVPTKPVYTPPPTPAPTEAAYIAKPETLDESEVPTSAPTGTPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTGAPTPAPTPAPTPAPTGAPTPFPTFAPTAPPTATPTAAPTTAAPTPAPTGGPYGPPDRRAHARSHQAGLHPPPTATPTAAPTAHPTAAPTKPVYTPPPTASPTPAPTAAPTPAPTAAPTPAPTATPTAAPTPDMDFDPNGSGASVYSKPPTPAPTEAAYTKPPYKPEDSKTRRLRQAALGSIPSTGPLKHFSRSKLNCELEEKNMSPLSVVGIEKEYWSVCTKGSSSQGCVHVGKLRVHGDRVCKLSPTCLEKDSGSILRRNIYVRIPRYPFTVLNRLYNNRRRQSLNSL 460
BLAST of EWM21357.1 vs. NCBI_GenBank
Match: gi|1214689141|gb|OWZ04823.1| (Cyst germination specific acidic repeat protein precursor, partial [Phytophthora megakarya]) HSP 1 Score: 135.576 bits (340), Expect = 9.099e-32 Identity = 164/379 (43.27%), Postives = 184/379 (48.55%), Query Frame = 0
Query: 71 TVAPTATPTATPTAAPTPVPTKPVYTPPPTPAPTEAAYIAKPETLDESEVPTSAPTGTPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTGAPTPAPTPAPTPAPTGAPTPFPTFAPTAPPTATPTAAPTTA---APTPAPTGGPYGPP-DRRAHARSHQAGLHPPPTATPTAAPTAHPTAAPTKPVYTPPPTASPTPAPTAAPTPAPTAAPTPAPTATPTAAPTPDMDFDPNGSGASVYSKPPTPAPTEAAYTKPPYKPEDSKTRRLRQA---ALGSIPSTGPLKHFSRSKLN-CELEEK----NMSPLSVV--GIEKEYW-SVCTKGSSSQGCVHVGKLRVHGDRVCKLSPTCLEKDSGSILRRNIY 434
T APT PT +PT APT PT T PT APT+A A ++ PT APT PT APT APT APT APT APT APT APT APT APT APT APT APT APT APT APT PT APT PT PT APT A APT APT P P D A + PT PT APT PT APT T PT +PT APT APT APT APT APT PT APT + PT APT+A P P D+ T A A P+ P +N +E K N S V + W S CT ++ C + + VC+L+ E G N +
Sbjct: 43 TDAPTDAPTDSPTDAPTDAPTD-APTDAPTDAPTDAPTDAP------TDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDA------PTDAPTDAPTDAPTDAPTD-APTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPT------------DAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPTDAPENPCDNQGINGVRVENKVRYDNTDIFSTVTGARNSQSWHSCCTDCWNAANCAAFSFEQDSTNSVCELT----ESTEGRTTNLNGW 391 The following BLAST results are available for this feature:
BLAST of EWM21357.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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