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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100666g2.10298.mrna |
| Orig protein id | gnl|cribi|Naga_100666g2.10298 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037253.1 | supercontig | KK037253.1:8746..11445 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9342 ID=rna9342|Name=rna9342|organism=Nannochloropsis gaditana|type=mRNA|length=867bp
CGACCAGGCAGTGAAGACACCTCGCATGACTAACCCTAGTGGCCGTCGGG
CATAAAAAGTCACCACGTGACACCGCAAGATCGACACGTGTTACCATCTA
CGCGCGCTTTCATATTAATTTCTCACTGACATGAATATCTTTGCGGGAAT
CCAACAGAGCGTGTCCGAACCCGACATCTGCAATCAAGGAACTGCAACTC
GCCGTCCCCGAGACCATGAAAAACATCCAACGTTGCCTTTCTATTGCCGT
GCTTTATTGCATGGTACTGATCAGCCCCACGCTGGCATTTTTGCCGCCGT
TGTCCACTGCCTCGAGCAAGTTTCGTGTGGCTAGCAGCCATCGAGCCCCT
CGCACAACTTCCTTAAAAGCTGCCTCTTTCTCCGATGTTTGCGTTTCGGT
GGCCGCGGCGGCTGATGAGTATGAGTACGGCGCCGTCGCCGCCCCTGGAT
GGGTGCTTCCTGTGGGTGCGCTTTTGACGCTAGGTTTAGCGGTGGCCATC
CCCCTCGCCCTCCGACCAGGGACGGAGGCCTTCGAAGAGGAGCGGGATCG
CTTGGAGGAGATGCGGCGACAGCGGGGGCAGAGCGAGGAGGAGTGAGGGA
GGGACGGAGGGAGGGAGGGAGGGGGCAGAGCGAGGAGGAGTAAGCCTGTC
GAGGAGGGAGGGGAGGAGGGGATGGCTTGCGAGGAGGAGGGGGAAGGAAG
AGGGGAGGAGGGGAGGAGGGGAGGGGCGAAGGGAGGGAGCCCGAGAAGGA
GAAAGAGAAAGCTTCACTTTTAAAACAAGAACAGATAAACAGCGTGCATG
CTCCGACAAGAATAATTGAAGAGCGTGCCATGAATAAAAAGTGTGCCATG
AATGGAGGAGTGGCGGG back to topprotein sequence of rna9342 >rna9342-protein ID=rna9342-protein|Name=rna9342|organism=Nannochloropsis gaditana|type=polypeptide|length=476bp
MCFYKVRREFGSEGIDRRRVIECMRIWQHLSILVGGDVTWGMADKVGRSM
GISAVDVEDNASVALGPTRSRRKGRAQEEVAILVRLVDEVRTMPDYKILA
RTQHESVPTFLGLLAGERLVQVTNAAFDRMVEGAGRIMSSAFVHRTTCIL
LLAQLVAPDDRSTFFEGFIQALFVPSRCFKSTFLLKWFQGDGDIRLCIVS
FRPVKVGHLSGVQILFEAAPQSKRLTSRPHRNQVIDTFRRHDTPSPGPSP
SAASSSSSISLHSESGARPRPKPRVPSEPGLENRRFGCSPDAWWQLSVPG
DPASMPNTSAARRSLEIEREGGEGRAGRGSFCIPALACLPEPCPPRSEAA
VRPEGGTKVGKGDETLLPRPLGRGVPVLIPTKEGGGQAEGEGGQARASEG
FAEGKMKEGRHDSSAMSTSSTTSLGDVCDGGAEASAGFLGVPDPLADEAE
DNLLDAALASAIGPTLTPELLNEVFD back to topmRNA from alignment at KK037253.1:8746..11445+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9342 ID=rna9342|Name=rna9342|organism=Nannochloropsis gaditana|type=mRNA|length=2700bp|location=Sequence derived from alignment at KK037253.1:8746..11445+ (Nannochloropsis gaditana)
ACTCGGCGCGTCCATAGTTCCAATGTCAGATTCCACGGCCATTTTTGACG
ACCGACACATAGAATGCCCATGATTTGATGCGTACGATGCGTGGGAGAAG
ACGTTGTTCAGTTGACGCTCCCAGAAAAAGAACTTGAGCCCACCTCGTCC
GAATAGCTGAGCACGTCATGCAGAAGAGAACGAGCGATACAGAGGTCCCT
AAAAACTGATTTTTTTCCAACACAGCGGTGCGAAAATTATGTCTACGCCA
CCAATGGTGGACTTAATTCAGGAAAGAAATCGCATCAAAATTGCACTTCG
GGAGGTCAGCACTGTTTGTACTGTCTGTAGGGACATCAAGGTACGTGATG
GGTTATACCCCCTTGCACCGGCGTTTTAAAGAGCTTCTTTTATGTTAATA
AAAACACGAAAAACCCGATTATCGCACAACCTCACCCTAAATTCAACCTT
ATACTGTGTAGACGGCCTGTTCCGGTTATCCTTGCGCAAGGTACGTTGGT
TTTCATCATGTTGATGAAGCGCCCCCTCGGTTGAAGTATACGAATGCTTG
ACTTACAGCTCTTCTGCACTACACAGGTGTTGCCGGTTGTCGTTGCCTTG
CCATCCACAGCCTCCTAAATCATCATCATCGTGTTCCAATAGAAAACGTT
CTCGAAAGGTGTCAGAAGCAGCTGCTGATGGTGCCCTGGGAGCCGCGGAG
TCCGACGCGTCGCTCGCGTCGGACTCCACAGGGAGTTCCGTGGAAGGAAC
AGAGCATGCGGAGTTTCGTCGAAGTCCGAGGCGACAGCAGCTTCTGCGCC
TGTCCTTGACAGAGTTGGCGCTGGCGCGCCACAACCCTCAGCGTCTCAGC
GCAGAATACGTCATGTGTTTCTATAAAGTGCGGCGCGAGTTTGGGAGTGA
GGGAATCGACCGACGGCGGGTGATCGAGTGCATGCGTATCTGGCAGCATT
TGAGCATCCTGGTCGGCGGCGACGTCACCTGGGGCATGGCGGACAAAGTG
GGGAGGTCCATGGGCATCTCggcggtggacgtggaggacaacGCCTCGGT
CGCCCTGGGGCCGACTCGAAGTCGACGGAAGGGccgggcccaggaggagg
tggcgatcCTGGTGAGgctggtggacgaggtgagGACCATGCCGGACTAC
AAAATCCTGGCACGGACGCAGCACGAGAGCGTGCCCACGTTTTTGGGTCT
GCTGGCGGGGGAGCGGCTGGTCCAGGTCACCAATGCGGCCTTCGACcgga
tggtggagggcgccGGGAGGATCATGAGCAGCGCCTTTGTGCACCGGACA
AcctgcatcctcctcttggcgCAGCTTGTGGCGCCGGATGACCGGAGCAC
CTTCTTCGAAGGCTTCATACAGGCGCTTTTTGTGCCCAGCCGCTGCTTCA
AATCCACTTTTCTCCTCAAATGGTTCCAGGGCGACGGAGACATCCGCCTC
TGTATCGTCAGCTTCCGACCCGTGAAGGTGGGACACCTATCCGGCGTCCA
GATCCTCTTCGAGGCGGCTCCCCAGAGCAAGCGGCTCACGTCTCGACCGC
ACCGGAACCAGGTCATCGACACCTTCCGAAGGCACgacacgccctccccc
ggcccctccccctccgccgcgtcctcttcttcctccatttctcttCATTC
CGAGTCGGGCGCGCGTCCGAGACCAAAGCCACGCGTGCCCTCGGAGCCTG
GCCTGGAAAACCGCCGCTTCGGGTGCTCTCCCGACGCCTGGTGGCAGCTG
TCGGTGCCCGGGGACCCTGCGTCCATGCCAAACACCTCGGCTGCCAGACG
ATCTCTCGAAAtcgagcgggaggggggcgagggaagggcggggaggggaa
gcttCTGCATACCGGCACTTGCCTGTCTCCCTGAGCCGTGCCCGCCGAGG
TCGGAGGCTGCTGTCAGgcctgaaggagggacaaaggtgggaaagggaga
cgaGACGCTCCTGCCAAGGCCACTGGGACGGGGCGTTCCGGTTTTGATCC
CTaccaaggagggcggggggcaggcggagggggagggagggcaggcacGG
GCGTCGGAGGGCTTcgcggaagggaagatgaaggagggcaggcacGACAG
CAGTGCCATGAGCACCAGCTCGACCACCAGCCTCGGTGACGTCTGTGACG
GAGGTGCGGAAGCCAGCGCGGGGTTCTTGGGAGTTCCGGATCCTCTGGCC
GACGAGGCGGAAGACAACCTACTGGACGCAGCCTTGGCCAGTGCGATCGG
GCCCACGCTGACGCCGGAGCTGTTGAATGAGGTCTTTGACTGAGCGTCAA
GACAAGGCGGTCGGTCGTTGATGAGGGTGGATGTAGTGGATTTTAGGACG
GCTAGGGCCTTCTCGGTAGGGAAATAGGGGTCTCGAAACTGTCTCAACGA
GAGGAGAAACgccggcaaggagggggaataTATATGTATCTCAGCCAGGT
ACATCGGTGTGATTGTATGTTGCTGCCAACTTGGATAAGGGCGATCCGTT
GTAATTGAATCAAGGCCAACGACAGTGGCTCTTTTTTTCGTGTGAATTTT
GTGTATCGTAACCAATGCCCGACAATGTAGTGAATGATGACTATCGTAGG
GCTCTGCTTTTGACAAGCGGGGATGTAGCGAGGAGAGTGTACCTCCCTCT
AGCATCCGCCTCTGACACAATTAATCATCTGATTAAACATGTAAATGATT
back to topCoding sequence (CDS) from alignment at KK037253.1:8746..11445+ >rna9342 ID=rna9342|Name=rna9342|organism=Nannochloropsis gaditana|type=CDS|length=1431bp|location=Sequence derived from alignment at KK037253.1:8746..11445+ (Nannochloropsis gaditana)
ATGTGTTTCTATAAAGTGCGGCGCGAGTTTGGGAGTGAGGGAATCGACCG
ACGGCGGGTGATCGAGTGCATGCGTATCTGGCAGCATTTGAGCATCCTGG
TCGGCGGCGACGTCACCTGGGGCATGGCGGACAAAGTGGGGAGGTCCATG
GGCATCTCggcggtggacgtggaggacaacGCCTCGGTCGCCCTGGGGCC
GACTCGAAGTCGACGGAAGGGccgggcccaggaggaggtggcgatcCTGG
TGAGgctggtggacgaggtgagGACCATGCCGGACTACAAAATCCTGGCA
CGGACGCAGCACGAGAGCGTGCCCACGTTTTTGGGTCTGCTGGCGGGGGA
GCGGCTGGTCCAGGTCACCAATGCGGCCTTCGACcggatggtggagggcg
ccGGGAGGATCATGAGCAGCGCCTTTGTGCACCGGACAAcctgcatcctc
ctcttggcgCAGCTTGTGGCGCCGGATGACCGGAGCACCTTCTTCGAAGG
CTTCATACAGGCGCTTTTTGTGCCCAGCCGCTGCTTCAAATCCACTTTTC
TCCTCAAATGGTTCCAGGGCGACGGAGACATCCGCCTCTGTATCGTCAGC
TTCCGACCCGTGAAGGTGGGACACCTATCCGGCGTCCAGATCCTCTTCGA
GGCGGCTCCCCAGAGCAAGCGGCTCACGTCTCGACCGCACCGGAACCAGG
TCATCGACACCTTCCGAAGGCACgacacgccctcccccggcccctccccc
tccgccgcgtcctcttcttcctccatttctcttCATTCCGAGTCGGGCGC
GCGTCCGAGACCAAAGCCACGCGTGCCCTCGGAGCCTGGCCTGGAAAACC
GCCGCTTCGGGTGCTCTCCCGACGCCTGGTGGCAGCTGTCGGTGCCCGGG
GACCCTGCGTCCATGCCAAACACCTCGGCTGCCAGACGATCTCTCGAAAt
cgagcgggaggggggcgagggaagggcggggaggggaagcttCTGCATAC
CGGCACTTGCCTGTCTCCCTGAGCCGTGCCCGCCGAGGTCGGAGGCTGCT
GTCAGgcctgaaggagggacaaaggtgggaaagggagacgaGACGCTCCT
GCCAAGGCCACTGGGACGGGGCGTTCCGGTTTTGATCCCTaccaaggagg
gcggggggcaggcggagggggagggagggcaggcacGGGCGTCGGAGGGC
TTcgcggaagggaagatgaaggagggcaggcacGACAGCAGTGCCATGAG
CACCAGCTCGACCACCAGCCTCGGTGACGTCTGTGACGGAGGTGCGGAAG
CCAGCGCGGGGTTCTTGGGAGTTCCGGATCCTCTGGCCGACGAGGCGGAA
GACAACCTACTGGACGCAGCCTTGGCCAGTGCGATCGGGCCCACGCTGAC
GCCGGAGCTGTTGAATGAGGTCTTTGACTGA back to top
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